RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 ZFP37Q9Y6Q3 630 aaPredicted RBP13.38□□□□□ -0.27
GTF2F1-201ENST00000394456 CROCCQ5TZA2 2017 aa13.38□□□□□ -0.27
GTF2F1-201ENST00000394456 H3BNH8 94 aa13.38□□□□□ -0.27
GTF2F1-201ENST00000394456 INPP4BO15327 924 aa13.38□□□□□ -0.27
GTF2F1-201ENST00000394456 HNRNPRO43390 633 aaKnown RBP13.38□□□□□ -0.27
GTF2F1-201ENST00000394456 PRAMEF12O95522 483 aa13.38□□□□□ -0.27
GTF2F1-201ENST00000394456 PRLP01236 227 aa13.38□□□□□ -0.27
GTF2F1-201ENST00000394456 IGLV3-27P01718 113 aa13.38□□□□□ -0.27
GTF2F1-201ENST00000394456 CDH2P19022 906 aaPredicted RBP13.38□□□□□ -0.27
GTF2F1-201ENST00000394456 CA5AP35218 305 aa13.38□□□□□ -0.27
GTF2F1-201ENST00000394456 DYNC1I2Q13409 638 aaKnown RBP13.38□□□□□ -0.27
GTF2F1-201ENST00000394456 RPS6KA2Q15349 733 aa13.38□□□□□ -0.27
GTF2F1-201ENST00000394456 USP41Q3LFD5 358 aa13.38□□□□□ -0.27
GTF2F1-201ENST00000394456 C16orf59Q7L2K0 433 aa13.38□□□□□ -0.27
GTF2F1-201ENST00000394456 ERMP1Q7Z2K6 904 aa13.38□□□□□ -0.27
GTF2F1-201ENST00000394456 OR52B6Q8NGF0 335 aa13.38□□□□□ -0.27
GTF2F1-201ENST00000394456 EEF1AKMT1Q8WVE0 214 aa13.38□□□□□ -0.27
GTF2F1-201ENST00000394456 PBXIP1Q96AQ6 731 aa13.38□□□□□ -0.27
GTF2F1-201ENST00000394456 PPP1R2P1Q96PQ5 205 aa13.38□□□□□ -0.27
GTF2F1-201ENST00000394456 TRMOQ9BU70 441 aa13.38□□□□□ -0.27
GTF2F1-201ENST00000394456 GKN1Q9NS71 199 aa13.38□□□□□ -0.27
GTF2F1-201ENST00000394456 PTTG2Q9NZH5 202 aa13.38□□□□□ -0.27
GTF2F1-201ENST00000394456 FKBPLQ9UIM3 349 aa13.38□□□□□ -0.27
GTF2F1-201ENST00000394456 OAZ3Q9UMX2 235 aa13.38□□□□□ -0.27
GTF2F1-201ENST00000394456 DHRS12A0PJE2 317 aa13.37□□□□□ -0.27
GTF2F1-201ENST00000394456 ACADVLP49748 655 aa13.37□□□□□ -0.27
GTF2F1-201ENST00000394456 HTR6P50406 440 aa13.37□□□□□ -0.27
GTF2F1-201ENST00000394456 ZNF140P52738 457 aaPredicted RBP13.37□□□□□ -0.27
GTF2F1-201ENST00000394456 TLE2Q04725 743 aa13.37□□□□□ -0.27
GTF2F1-201ENST00000394456 TRIM60Q495X7 471 aa13.37□□□□□ -0.27
GTF2F1-201ENST00000394456 TIGD2Q4W5G0 525 aa13.37□□□□□ -0.27
GTF2F1-201ENST00000394456 KRT80Q6KB66 452 aa13.37□□□□□ -0.27
GTF2F1-201ENST00000394456 KIAA1841Q6NSI8 718 aa13.37□□□□□ -0.27
GTF2F1-201ENST00000394456 CHST15Q7LFX5 561 aaPredicted RBP13.37□□□□□ -0.27
GTF2F1-201ENST00000394456 RALGPS2Q86X27 583 aaPredicted RBP13.37□□□□□ -0.27
GTF2F1-201ENST00000394456 ADGRG5Q8IZF4 528 aa13.37□□□□□ -0.27
GTF2F1-201ENST00000394456 TRIML2Q8N7C3 387 aa13.37□□□□□ -0.27
GTF2F1-201ENST00000394456 LPCAT1Q8NF37 534 aa13.37□□□□□ -0.27
GTF2F1-201ENST00000394456 FEM1CQ96JP0 617 aa13.37□□□□□ -0.27
GTF2F1-201ENST00000394456 ZFRQ96KR1 1074 aaKnown RBP13.37□□□□□ -0.27
GTF2F1-201ENST00000394456 BIRC8Q96P09 236 aa13.37□□□□□ -0.27
GTF2F1-201ENST00000394456 SDR39U1Q9NRG7 319 aaPredicted RBP13.37□□□□□ -0.27
GTF2F1-201ENST00000394456 NDUFAF1Q9Y375 327 aa13.37□□□□□ -0.27
GTF2F1-201ENST00000394456 GPR45Q9Y5Y3 372 aa13.37□□□□□ -0.27
GTF2F1-201ENST00000394456 H6PDO95479 791 aa13.37□□□□□ -0.27
GTF2F1-201ENST00000394456 SEC24AO95486 1093 aa13.37□□□□□ -0.27
GTF2F1-201ENST00000394456 FGF1P05230 155 aa13.37□□□□□ -0.27
GTF2F1-201ENST00000394456 ZDHHC11BP0C7U3 371 aa13.37□□□□□ -0.27
GTF2F1-201ENST00000394456 LBPP18428 481 aa13.37□□□□□ -0.27
GTF2F1-201ENST00000394456 YAP1P46937 504 aaKnown RBP13.37□□□□□ -0.27
GTF2F1-201ENST00000394456 GSK3BP49841 420 aa13.37□□□□□ -0.27
GTF2F1-201ENST00000394456 SUOXP51687 545 aa13.37□□□□□ -0.27
GTF2F1-201ENST00000394456 SPOUT1Q5T280 376 aaKnown RBP13.37□□□□□ -0.27
GTF2F1-201ENST00000394456 KIAA2013Q8IYS2 634 aa13.37□□□□□ -0.27
GTF2F1-201ENST00000394456 CDYL2Q8N8U2 506 aa13.37□□□□□ -0.27
GTF2F1-201ENST00000394456 OSBPL11Q9BXB4 747 aa13.37□□□□□ -0.27
GTF2F1-201ENST00000394456 GOLGA8CPA6NN73 597 aa13.36□□□□□ -0.27
GTF2F1-201ENST00000394456 CRCPO75575 148 aa13.36□□□□□ -0.27
GTF2F1-201ENST00000394456 OR4F21O95013 312 aa13.36□□□□□ -0.27
GTF2F1-201ENST00000394456 TSPAN12O95859 305 aa13.36□□□□□ -0.27
GTF2F1-201ENST00000394456 FGF4P08620 206 aa13.36□□□□□ -0.27
GTF2F1-201ENST00000394456 SERPINF2P08697 491 aa13.36□□□□□ -0.27
GTF2F1-201ENST00000394456 CCL5P13501 91 aa13.36□□□□□ -0.27
GTF2F1-201ENST00000394456 HSPA13P48723 471 aa13.36□□□□□ -0.27
GTF2F1-201ENST00000394456 PRMT2P55345 433 aa13.36□□□□□ -0.27
GTF2F1-201ENST00000394456 NFYCQ13952 458 aa13.36□□□□□ -0.27
GTF2F1-201ENST00000394456 SELPLGQ14242 412 aa13.36□□□□□ -0.27
GTF2F1-201ENST00000394456 KIAA0100Q14667 2235 aaKnown RBP13.36□□□□□ -0.27
GTF2F1-201ENST00000394456 SLC2A7Q6PXP3 512 aa13.36□□□□□ -0.27
GTF2F1-201ENST00000394456 BLOC1S3Q6QNY0 202 aa13.36□□□□□ -0.27
GTF2F1-201ENST00000394456 GLT6D1Q7Z4J2 308 aa13.36□□□□□ -0.27
GTF2F1-201ENST00000394456 GALNT7Q86SF2 657 aa13.36□□□□□ -0.27
GTF2F1-201ENST00000394456 ZNF786Q8N393 782 aa13.36□□□□□ -0.27
GTF2F1-201ENST00000394456 PCYOX1LQ8NBM8 494 aa13.36□□□□□ -0.27
GTF2F1-201ENST00000394456 BHMTQ93088 406 aa13.36□□□□□ -0.27
GTF2F1-201ENST00000394456 KIAA1191Q96A73 305 aa13.36□□□□□ -0.27
GTF2F1-201ENST00000394456 TMEM125Q96AQ2 219 aa13.36□□□□□ -0.27
GTF2F1-201ENST00000394456 SEPHS2Q99611 448 aa13.36□□□□□ -0.27
GTF2F1-201ENST00000394456 CCM2LQ9NUG4 571 aaPredicted RBP13.36□□□□□ -0.27
GTF2F1-201ENST00000394456 ABCD2Q9UBJ2 740 aa13.36□□□□□ -0.27
GTF2F1-201ENST00000394456 CNOT11Q9UKZ1 510 aaKnown RBP13.36□□□□□ -0.27
GTF2F1-201ENST00000394456 DMTF1Q9Y222 760 aa13.36□□□□□ -0.27
GTF2F1-201ENST00000394456 PCDHA9Q9Y5H5 950 aa13.36□□□□□ -0.27
GTF2F1-201ENST00000394456 MAGED1Q9Y5V3 778 aaPredicted RBP13.36□□□□□ -0.27
GTF2F1-201ENST00000394456 OAS3Q9Y6K5 1087 aaKnown RBP13.36□□□□□ -0.27
GTF2F1-201ENST00000394456 KERAO60938 352 aa13.36□□□□□ -0.27
GTF2F1-201ENST00000394456 NDST3O95803 873 aa13.36□□□□□ -0.27
GTF2F1-201ENST00000394456 CXCL10P02778 98 aa13.36□□□□□ -0.27
GTF2F1-201ENST00000394456 ITGB6P18564 788 aa13.36□□□□□ -0.27
GTF2F1-201ENST00000394456 HLA-DPA1P20036 260 aa13.36□□□□□ -0.27
GTF2F1-201ENST00000394456 ATP4BP51164 291 aa13.36□□□□□ -0.27
GTF2F1-201ENST00000394456 NR1H2P55055 460 aa13.36□□□□□ -0.27
GTF2F1-201ENST00000394456 LCP2Q13094 533 aa13.36□□□□□ -0.27
GTF2F1-201ENST00000394456 RBBP7Q16576 425 aa13.36□□□□□ -0.27
GTF2F1-201ENST00000394456 PARP15Q460N3 678 aa13.36□□□□□ -0.27
GTF2F1-201ENST00000394456 CTSL3PQ5NE16 218 aa13.36□□□□□ -0.27
GTF2F1-201ENST00000394456 TBPL2Q6SJ96 375 aa13.36□□□□□ -0.27
GTF2F1-201ENST00000394456 HACD2Q6Y1H2 254 aa13.36□□□□□ -0.27
GTF2F1-201ENST00000394456 RAB44Q7Z6P3 723 aaPredicted RBP13.36□□□□□ -0.27
GTF2F1-201ENST00000394456 DENND1CQ8IV53 801 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms