RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 PRMT5O14744 637 aaPredicted RBP11.04□□□□□ -0.64
TCOF1-203ENST00000394269 AZIN1O14977 448 aa11.04□□□□□ -0.64
TCOF1-203ENST00000394269 RHOP08100 348 aa11.04□□□□□ -0.64
TCOF1-203ENST00000394269 GNAZP19086 355 aa11.04□□□□□ -0.64
TCOF1-203ENST00000394269 SERPINA4P29622 427 aa11.04□□□□□ -0.64
TCOF1-203ENST00000394269 HMGCLP35914 325 aa11.04□□□□□ -0.64
TCOF1-203ENST00000394269 GDF5P43026 501 aa11.04□□□□□ -0.64
TCOF1-203ENST00000394269 STX1BP61266 288 aa11.04□□□□□ -0.64
TCOF1-203ENST00000394269 SLC5A9Q2M3M2 681 aa11.04□□□□□ -0.64
TCOF1-203ENST00000394269 TMC8Q8IU68 726 aa11.04□□□□□ -0.64
TCOF1-203ENST00000394269 FBXW8Q8N3Y1 598 aa11.04□□□□□ -0.64
TCOF1-203ENST00000394269 CHST14Q8NCH0 376 aa11.04□□□□□ -0.64
TCOF1-203ENST00000394269 RP9Q8TA86 221 aaKnown RBP11.04□□□□□ -0.64
TCOF1-203ENST00000394269 FUBP1Q96AE4 644 aaKnown RBP11.04□□□□□ -0.64
TCOF1-203ENST00000394269 ACDQ96AP0 544 aa11.04□□□□□ -0.64
TCOF1-203ENST00000394269 NAF1Q96HR8 494 aaKnown RBP11.04□□□□□ -0.64
TCOF1-203ENST00000394269 ZSWIM3Q96MP5 696 aa11.04□□□□□ -0.64
TCOF1-203ENST00000394269 C1orf50Q9BV19 199 aa11.04□□□□□ -0.64
TCOF1-203ENST00000394269 CXorf56Q9H5V9 222 aa11.04□□□□□ -0.64
TCOF1-203ENST00000394269 AKTIPQ9H8T0 292 aa11.04□□□□□ -0.64
TCOF1-203ENST00000394269 ZBTB26Q9HCK0 441 aa11.04□□□□□ -0.64
TCOF1-203ENST00000394269 PRSS21Q9Y6M0 314 aa11.04□□□□□ -0.64
TCOF1-203ENST00000394269 CHD9Q3L8U1 2897 aa11.04□□□□□ -0.64
TCOF1-203ENST00000394269 NR5A2O00482 541 aa11.04□□□□□ -0.64
TCOF1-203ENST00000394269 LILRB3O75022 631 aa11.04□□□□□ -0.64
TCOF1-203ENST00000394269 HGFP14210 728 aa11.04□□□□□ -0.64
TCOF1-203ENST00000394269 ANPEPP15144 967 aa11.04□□□□□ -0.64
TCOF1-203ENST00000394269 RALGDSQ12967 914 aa11.04□□□□□ -0.64
TCOF1-203ENST00000394269 GRB7Q14451 532 aa11.04□□□□□ -0.64
TCOF1-203ENST00000394269 TYSND1Q2T9J0 566 aa11.04□□□□□ -0.64
TCOF1-203ENST00000394269 OR2AP1Q8NGE2 309 aa11.04□□□□□ -0.64
TCOF1-203ENST00000394269 TWIST2Q8WVJ9 160 aa11.04□□□□□ -0.64
TCOF1-203ENST00000394269 ATOH8Q96SQ7 321 aa11.04□□□□□ -0.64
TCOF1-203ENST00000394269 RTKNQ9BST9 563 aa11.04□□□□□ -0.64
TCOF1-203ENST00000394269 TRIM8Q9BZR9 551 aa11.04□□□□□ -0.64
TCOF1-203ENST00000394269 C1orf21Q9H246 121 aa11.04□□□□□ -0.64
TCOF1-203ENST00000394269 ZDHHC4Q9NPG8 344 aa11.04□□□□□ -0.64
TCOF1-203ENST00000394269 TDP1Q9NUW8 608 aa11.04□□□□□ -0.64
TCOF1-203ENST00000394269 GEMIN8Q9NWZ8 242 aaKnown RBP11.04□□□□□ -0.64
TCOF1-203ENST00000394269 ASB3Q9Y575 518 aa11.04□□□□□ -0.64
TCOF1-203ENST00000394269 NPIPB15A6NHN6 443 aaPredicted RBP11.03□□□□□ -0.64
TCOF1-203ENST00000394269 SRCP12931 536 aa11.03□□□□□ -0.64
TCOF1-203ENST00000394269 TYRP14679 529 aa11.03□□□□□ -0.64
TCOF1-203ENST00000394269 ITGALP20701 1170 aa11.03□□□□□ -0.64
TCOF1-203ENST00000394269 VHLP40337 213 aa11.03□□□□□ -0.64
TCOF1-203ENST00000394269 RECQLP46063 649 aaPredicted RBP11.03□□□□□ -0.64
TCOF1-203ENST00000394269 CCNHP51946 323 aaPredicted RBP11.03□□□□□ -0.64
TCOF1-203ENST00000394269 THOP1P52888 689 aa11.03□□□□□ -0.64
TCOF1-203ENST00000394269 AP1S1P61966 158 aa11.03□□□□□ -0.64
TCOF1-203ENST00000394269 CACNG1Q06432 222 aa11.03□□□□□ -0.64
TCOF1-203ENST00000394269 LPCAT4Q643R3 524 aa11.03□□□□□ -0.64
TCOF1-203ENST00000394269 ASTLQ6HA08 431 aaPredicted RBP11.03□□□□□ -0.64
TCOF1-203ENST00000394269 TMC5Q6UXY8 1006 aa11.03□□□□□ -0.64
TCOF1-203ENST00000394269 HTR3DQ70Z44 454 aa11.03□□□□□ -0.64
TCOF1-203ENST00000394269 NKAPQ8N5F7 415 aaKnown RBP11.03□□□□□ -0.64
TCOF1-203ENST00000394269 CD200R1Q8TD46 325 aa11.03□□□□□ -0.64
TCOF1-203ENST00000394269 KIAA1191Q96A73 305 aa11.03□□□□□ -0.64
TCOF1-203ENST00000394269 TCF12Q99081 682 aa11.03□□□□□ -0.64
TCOF1-203ENST00000394269 HACD3Q9P035 362 aa11.03□□□□□ -0.64
TCOF1-203ENST00000394269 DNMT3BQ9UBC3 853 aaKnown RBP11.03□□□□□ -0.64
TCOF1-203ENST00000394269 A0A0J9YYE9 177 aa11.03□□□□□ -0.64
TCOF1-203ENST00000394269 GLYATL1P3A0A0U1RQE8 302 aa11.03□□□□□ -0.64
TCOF1-203ENST00000394269 MAP3K7O43318 606 aa11.03□□□□□ -0.64
TCOF1-203ENST00000394269 TRBC1P01850 177 aa11.03□□□□□ -0.64
TCOF1-203ENST00000394269 CHRM1P11229 460 aaPredicted RBP11.03□□□□□ -0.64
TCOF1-203ENST00000394269 ZNF7P17097 686 aaPredicted RBP11.03□□□□□ -0.64
TCOF1-203ENST00000394269 BPIP17213 487 aa11.03□□□□□ -0.64
TCOF1-203ENST00000394269 SNRPD1P62314 119 aaKnown RBP11.03□□□□□ -0.64
TCOF1-203ENST00000394269 MRPS22P82650 360 aaKnown RBP11.03□□□□□ -0.64
TCOF1-203ENST00000394269 HSPA14Q0VDF9 509 aa11.03□□□□□ -0.64
TCOF1-203ENST00000394269 SLC14A2Q15849 920 aa11.03□□□□□ -0.64
TCOF1-203ENST00000394269 AARS2Q5JTZ9 985 aaKnown RBP11.03□□□□□ -0.64
TCOF1-203ENST00000394269 LRRC66Q68CR7 880 aa11.03□□□□□ -0.64
TCOF1-203ENST00000394269 TLDC1Q6P9B6 456 aa11.03□□□□□ -0.64
TCOF1-203ENST00000394269 FBXO46Q6PJ61 603 aaPredicted RBP11.03□□□□□ -0.64
TCOF1-203ENST00000394269 ISLR2Q6UXK2 745 aa11.03□□□□□ -0.64
TCOF1-203ENST00000394269 BNC2Q6ZN30 1099 aaPredicted RBP11.03□□□□□ -0.64
TCOF1-203ENST00000394269 SPATA24Q86W54 205 aa11.03□□□□□ -0.64
TCOF1-203ENST00000394269 ADGRG2Q8IZP9 1017 aa11.03□□□□□ -0.64
TCOF1-203ENST00000394269 MRPL43Q8N983 215 aaKnown RBP11.03□□□□□ -0.64
TCOF1-203ENST00000394269 PEX13Q92968 403 aa11.03□□□□□ -0.64
TCOF1-203ENST00000394269 PBXIP1Q96AQ6 731 aa11.03□□□□□ -0.64
TCOF1-203ENST00000394269 ZFYVE19Q96K21 471 aa11.03□□□□□ -0.64
TCOF1-203ENST00000394269 TFB2MQ9H5Q4 396 aaKnown RBP11.03□□□□□ -0.64
TCOF1-203ENST00000394269 STX18Q9P2W9 335 aaKnown RBP11.03□□□□□ -0.64
TCOF1-203ENST00000394269 CIDEBQ9UHD4 219 aa11.03□□□□□ -0.64
TCOF1-203ENST00000394269 MICAL3Q7RTP6 2002 aa11.03□□□□□ -0.64
TCOF1-203ENST00000394269 KERAO60938 352 aa11.03□□□□□ -0.64
TCOF1-203ENST00000394269 XRCC1P18887 633 aaPredicted RBP11.03□□□□□ -0.64
TCOF1-203ENST00000394269 AKT1P31749 480 aa11.03□□□□□ -0.64
TCOF1-203ENST00000394269 PTGER3P43115 390 aa11.03□□□□□ -0.64
TCOF1-203ENST00000394269 XIAPP98170 497 aa11.03□□□□□ -0.64
TCOF1-203ENST00000394269 FLOT2Q14254 428 aa11.03□□□□□ -0.64
TCOF1-203ENST00000394269 FUT11Q495W5 492 aa11.03□□□□□ -0.64
TCOF1-203ENST00000394269 VPS26BQ4G0F5 336 aa11.03□□□□□ -0.64
TCOF1-203ENST00000394269 LILRA6Q6PI73 481 aa11.03□□□□□ -0.64
TCOF1-203ENST00000394269 DNAJC5GQ8N7S2 189 aa11.03□□□□□ -0.64
TCOF1-203ENST00000394269 OR52B6Q8NGF0 335 aa11.03□□□□□ -0.64
TCOF1-203ENST00000394269 FIBINQ8TAL6 211 aa11.03□□□□□ -0.64
TCOF1-203ENST00000394269 ACTRT2Q8TDY3 377 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms