RNA–Protein interactions for RNA: ENST00000393287.9

ATXN3-203, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-203ENST00000393287 KXD1Q9BQD3 176 aa8.04□□□□□ -1.12
ATXN3-203ENST00000393287 FBXL12Q9NXK8 326 aa8.04□□□□□ -1.12
ATXN3-203ENST00000393287 TRPC4Q9UBN4 977 aa8.04□□□□□ -1.12
ATXN3-203ENST00000393287 TRPS1Q9UHF7 1281 aa8.04□□□□□ -1.12
ATXN3-203ENST00000393287 WNT6Q9Y6F9 365 aa8.04□□□□□ -1.12
ATXN3-203ENST00000393287 H3BNC9 293 aa8.04□□□□□ -1.12
ATXN3-203ENST00000393287 PSMD11O00231 422 aa8.04□□□□□ -1.12
ATXN3-203ENST00000393287 NPHS1O60500 1241 aa8.04□□□□□ -1.12
ATXN3-203ENST00000393287 AGXTP21549 392 aa8.04□□□□□ -1.12
ATXN3-203ENST00000393287 TNFRSF4P43489 277 aa8.04□□□□□ -1.12
ATXN3-203ENST00000393287 CSNK1DP48730 415 aa8.04□□□□□ -1.12
ATXN3-203ENST00000393287 GSTA3Q16772 222 aa8.04□□□□□ -1.12
ATXN3-203ENST00000393287 SAMD4BQ5PRF9 694 aaKnown RBP8.04□□□□□ -1.12
ATXN3-203ENST00000393287 CERCAMQ5T4B2 595 aa8.04□□□□□ -1.12
ATXN3-203ENST00000393287 AADACL2Q6P093 401 aa8.04□□□□□ -1.12
ATXN3-203ENST00000393287 C12orf76Q8N812 135 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-203ENST00000393287 FLCNQ8NFG4 579 aa8.04□□□□□ -1.12
ATXN3-203ENST00000393287 OR2T3Q8NH03 318 aa8.04□□□□□ -1.12
ATXN3-203ENST00000393287 OR10G6Q8NH81 332 aa8.04□□□□□ -1.12
ATXN3-203ENST00000393287 SLC35B2Q8TB61 432 aa8.04□□□□□ -1.12
ATXN3-203ENST00000393287 ART5Q96L15 291 aa8.04□□□□□ -1.12
ATXN3-203ENST00000393287 NLE1Q9NVX2 485 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-203ENST00000393287 SPATA6Q9NWH7 488 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-203ENST00000393287 LGALS13Q9UHV8 139 aa8.04□□□□□ -1.12
ATXN3-203ENST00000393287 IFNA16P05015 189 aa8.04□□□□□ -1.12
ATXN3-203ENST00000393287 COPZ1P61923 177 aa8.04□□□□□ -1.12
ATXN3-203ENST00000393287 DHCR24Q15392 516 aa8.04□□□□□ -1.12
ATXN3-203ENST00000393287 ZFP1Q6P2D0 407 aa8.04□□□□□ -1.12
ATXN3-203ENST00000393287 ADGRD1Q6QNK2 874 aa8.04□□□□□ -1.12
ATXN3-203ENST00000393287 PYROXD2Q8N2H3 581 aa8.04□□□□□ -1.12
ATXN3-203ENST00000393287 KIAA1958Q8N8K9 716 aa8.04□□□□□ -1.12
ATXN3-203ENST00000393287 OR10T2Q8NGX3 314 aa8.04□□□□□ -1.12
ATXN3-203ENST00000393287 PROX1Q92786 737 aa8.04□□□□□ -1.12
ATXN3-203ENST00000393287 WRAP53Q9BUR4 548 aaKnown RBP8.04□□□□□ -1.12
ATXN3-203ENST00000393287 THUMPD1Q9NXG2 353 aaKnown RBP8.04□□□□□ -1.12
ATXN3-203ENST00000393287 PCDHGA2Q9Y5H1 932 aa8.04□□□□□ -1.12
ATXN3-203ENST00000393287 TMX2-CTNND1H3BSU7 103 aa8.04□□□□□ -1.12
ATXN3-203ENST00000393287 MATN2O00339 956 aa8.04□□□□□ -1.12
ATXN3-203ENST00000393287 DNAJA2O60884 412 aa8.04□□□□□ -1.12
ATXN3-203ENST00000393287 PLEKHG6Q3KR16 790 aa8.04□□□□□ -1.12
ATXN3-203ENST00000393287 C10orf53Q8N6V4 93 aa8.04□□□□□ -1.12
ATXN3-203ENST00000393287 LMO3Q8TAP4 145 aa8.04□□□□□ -1.12
ATXN3-203ENST00000393287 SPPL3Q8TCT6 385 aa8.04□□□□□ -1.12
ATXN3-203ENST00000393287 MTF2Q9Y483 593 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-203ENST00000393287 MYH6P13533 1939 aa8.04□□□□□ -1.12
ATXN3-203ENST00000393287 TCRBV21S2A2A0A5A6 115 aa8.04□□□□□ -1.12
ATXN3-203ENST00000393287 WASH4PA8MWX3 477 aa8.04□□□□□ -1.12
ATXN3-203ENST00000393287 PHGDHO43175 533 aaKnown RBP8.04□□□□□ -1.12
ATXN3-203ENST00000393287 UBXN7O94888 489 aa8.04□□□□□ -1.12
ATXN3-203ENST00000393287 HLA-DQB2P05538 268 aa8.04□□□□□ -1.12
ATXN3-203ENST00000393287 CDH3P22223 829 aa8.04□□□□□ -1.12
ATXN3-203ENST00000393287 PTPN4P29074 926 aa8.04□□□□□ -1.12
ATXN3-203ENST00000393287 WASP42768 502 aa8.04□□□□□ -1.12
ATXN3-203ENST00000393287 PSMD4P55036 377 aaKnown RBP8.04□□□□□ -1.12
ATXN3-203ENST00000393287 BNIP2Q12982 314 aa8.04□□□□□ -1.12
ATXN3-203ENST00000393287 ZC3H12BQ5HYM0 836 aaKnown RBP8.04□□□□□ -1.12
ATXN3-203ENST00000393287 LY6G5CQ5SRR4 150 aa8.04□□□□□ -1.12
ATXN3-203ENST00000393287 ANKRD54Q6NXT1 300 aa8.04□□□□□ -1.12
ATXN3-203ENST00000393287 HTR3DQ70Z44 454 aa8.04□□□□□ -1.12
ATXN3-203ENST00000393287 DEFB123Q8N688 67 aa8.04□□□□□ -1.12
ATXN3-203ENST00000393287 EFCAB3Q8N7B9 438 aa8.04□□□□□ -1.12
ATXN3-203ENST00000393287 DNAJC5GQ8N7S2 189 aa8.04□□□□□ -1.12
ATXN3-203ENST00000393287 KBTBD7Q8WVZ9 684 aa8.04□□□□□ -1.12
ATXN3-203ENST00000393287 ISG20Q96AZ6 181 aaKnown RBP8.04□□□□□ -1.12
ATXN3-203ENST00000393287 TMEM59LQ9UK28 342 aa8.04□□□□□ -1.12
ATXN3-203ENST00000393287 SLC12A4Q9UP95 1085 aa8.04□□□□□ -1.12
ATXN3-203ENST00000393287 SNX8Q9Y5X2 465 aa8.04□□□□□ -1.12
ATXN3-203ENST00000393287 NPEPPSL1A6NEC2 478 aa8.03□□□□□ -1.12
ATXN3-203ENST00000393287 CAPN14A8MX76 684 aa8.03□□□□□ -1.12
ATXN3-203ENST00000393287 SLC22A2O15244 555 aa8.03□□□□□ -1.12
ATXN3-203ENST00000393287 STK16O75716 305 aa8.03□□□□□ -1.12
ATXN3-203ENST00000393287 PIGNO95427 931 aa8.03□□□□□ -1.12
ATXN3-203ENST00000393287 MPC1LP0DKB6 136 aa8.03□□□□□ -1.12
ATXN3-203ENST00000393287 NTSR1P30989 418 aa8.03□□□□□ -1.12
ATXN3-203ENST00000393287 TCEAL5Q5H9L2 206 aa8.03□□□□□ -1.12
ATXN3-203ENST00000393287 PLEKHS1Q5SXH7 462 aa8.03□□□□□ -1.12
ATXN3-203ENST00000393287 GALNT18Q6P9A2 607 aa8.03□□□□□ -1.12
ATXN3-203ENST00000393287 CIR1Q86X95 450 aaPredicted RBP8.03□□□□□ -1.12
ATXN3-203ENST00000393287 RBM12BQ8IXT5 1001 aaKnown RBP8.03□□□□□ -1.12
ATXN3-203ENST00000393287 GJD3Q8N144 294 aa8.03□□□□□ -1.12
ATXN3-203ENST00000393287 HM13Q8TCT9 377 aa8.03□□□□□ -1.12
ATXN3-203ENST00000393287 PAAF1Q9BRP4 392 aa8.03□□□□□ -1.12
ATXN3-203ENST00000393287 EXD2Q9NVH0 621 aa8.03□□□□□ -1.12
ATXN3-203ENST00000393287 CALML5Q9NZT1 146 aa8.03□□□□□ -1.12
ATXN3-203ENST00000393287 TMEM265A0A087WTH1 108 aa8.03□□□□□ -1.12
ATXN3-203ENST00000393287 ATP1B2P14415 290 aaPredicted RBP8.03□□□□□ -1.12
ATXN3-203ENST00000393287 AGKQ53H12 422 aa8.03□□□□□ -1.12
ATXN3-203ENST00000393287 ERICH5Q6P6B1 374 aa8.03□□□□□ -1.12
ATXN3-203ENST00000393287 TRIM40Q6P9F5 258 aa8.03□□□□□ -1.12
ATXN3-203ENST00000393287 RALGPS2Q86X27 583 aaPredicted RBP8.03□□□□□ -1.12
ATXN3-203ENST00000393287 TMPRSS6Q8IU80 811 aa8.03□□□□□ -1.12
ATXN3-203ENST00000393287 KCTD4Q8WVF5 259 aa8.03□□□□□ -1.12
ATXN3-203ENST00000393287 KLHDC7BQ96G42 594 aa8.03□□□□□ -1.12
ATXN3-203ENST00000393287 DNAJC28Q9NX36 388 aa8.03□□□□□ -1.12
ATXN3-203ENST00000393287 ATXN2Q99700 1313 aaKnown RBP8.03□□□□□ -1.12
ATXN3-203ENST00000393287 YKT6O15498 198 aa8.03□□□□□ -1.12
ATXN3-203ENST00000393287 IRAK1P51617 712 aa8.03□□□□□ -1.12
ATXN3-203ENST00000393287 ELAVL3Q14576 367 aaKnown RBP8.03□□□□□ -1.12
ATXN3-203ENST00000393287 MBTPS1Q14703 1052 aa8.03□□□□□ -1.12
ATXN3-203ENST00000393287 SLC1A5Q15758 541 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms