RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 AGTR2P50052 363 aa14.83□□□□□ -0.03
MKS1-202ENST00000393119 RCN2Q14257 317 aa14.83□□□□□ -0.03
MKS1-202ENST00000393119 ARMC3Q5W041 872 aa14.83□□□□□ -0.03
MKS1-202ENST00000393119 ANKRD54Q6NXT1 300 aa14.83□□□□□ -0.03
MKS1-202ENST00000393119 Q6ZVL8 140 aa14.83□□□□□ -0.03
MKS1-202ENST00000393119 PIWIL4Q7Z3Z4 852 aaKnown RBP14.83□□□□□ -0.03
MKS1-202ENST00000393119 PELI3Q8N2H9 469 aa14.83□□□□□ -0.03
MKS1-202ENST00000393119 SCG3Q8WXD2 468 aaKnown RBP14.83□□□□□ -0.03
MKS1-202ENST00000393119 TIFAQ96CG3 184 aa14.83□□□□□ -0.03
MKS1-202ENST00000393119 NAF1Q96HR8 494 aaKnown RBP14.83□□□□□ -0.03
MKS1-202ENST00000393119 CPEB1Q9BZB8 566 aaKnown RBP14.83□□□□□ -0.03
MKS1-202ENST00000393119 CEP44Q9C0F1 390 aa14.83□□□□□ -0.03
MKS1-202ENST00000393119 PCDH12Q9NPG4 1184 aa14.83□□□□□ -0.03
MKS1-202ENST00000393119 PRR5-ARHGAP8B1AHC4 643 aa14.83□□□□□ -0.04
MKS1-202ENST00000393119 BTN3A1O00481 513 aa14.83□□□□□ -0.04
MKS1-202ENST00000393119 HOXC11O43248 304 aaPredicted RBP14.83□□□□□ -0.04
MKS1-202ENST00000393119 TBX10O75333 385 aa14.83□□□□□ -0.04
MKS1-202ENST00000393119 IPO13O94829 963 aaKnown RBP14.83□□□□□ -0.04
MKS1-202ENST00000393119 UNC5CO95185 931 aa14.83□□□□□ -0.04
MKS1-202ENST00000393119 APOA4P06727 396 aa14.83□□□□□ -0.04
MKS1-202ENST00000393119 MAPK8P45983 427 aa14.83□□□□□ -0.04
MKS1-202ENST00000393119 CLCN7P51798 805 aa14.83□□□□□ -0.04
MKS1-202ENST00000393119 HK3P52790 923 aa14.83□□□□□ -0.04
MKS1-202ENST00000393119 PRKAA2P54646 552 aa14.83□□□□□ -0.04
MKS1-202ENST00000393119 ARHGAP8P85298 464 aa14.83□□□□□ -0.04
MKS1-202ENST00000393119 B4GALNT1Q00973 533 aa14.83□□□□□ -0.04
MKS1-202ENST00000393119 SULT2A1Q06520 285 aa14.83□□□□□ -0.04
MKS1-202ENST00000393119 TMEM198Q66K66 360 aa14.83□□□□□ -0.04
MKS1-202ENST00000393119 PTGR2Q8N8N7 351 aaPredicted RBP14.83□□□□□ -0.04
MKS1-202ENST00000393119 SPDYE1Q8NFV5 336 aaPredicted RBP14.83□□□□□ -0.04
MKS1-202ENST00000393119 PBXIP1Q96AQ6 731 aa14.83□□□□□ -0.04
MKS1-202ENST00000393119 LINGO1Q96FE5 620 aa14.83□□□□□ -0.04
MKS1-202ENST00000393119 STK38LQ9Y2H1 464 aa14.83□□□□□ -0.04
MKS1-202ENST00000393119 COQ6Q9Y2Z9 468 aa14.83□□□□□ -0.04
MKS1-202ENST00000393119 OAS3Q9Y6K5 1087 aaKnown RBP14.83□□□□□ -0.04
MKS1-202ENST00000393119 KRT87PA6NCN2 255 aa14.82□□□□□ -0.04
MKS1-202ENST00000393119 E5RI56 91 aa14.82□□□□□ -0.04
MKS1-202ENST00000393119 ENO1P06733 434 aaKnown RBP14.82□□□□□ -0.04
MKS1-202ENST00000393119 RPL26P61254 145 aaKnown RBP14.82□□□□□ -0.04
MKS1-202ENST00000393119 SH2D4BQ5SQS7 431 aa14.82□□□□□ -0.04
MKS1-202ENST00000393119 CLEC6AQ6EIG7 209 aa14.82□□□□□ -0.04
MKS1-202ENST00000393119 KLC3Q6P597 504 aa14.82□□□□□ -0.04
MKS1-202ENST00000393119 RDH11Q8TC12 318 aa14.82□□□□□ -0.04
MKS1-202ENST00000393119 MCCC1Q96RQ3 725 aaPredicted RBP14.82□□□□□ -0.04
MKS1-202ENST00000393119 ATOH8Q96SQ7 321 aa14.82□□□□□ -0.04
MKS1-202ENST00000393119 WRAP53Q9BUR4 548 aaKnown RBP14.82□□□□□ -0.04
MKS1-202ENST00000393119 ETAA1Q9NY74 926 aa14.82□□□□□ -0.04
MKS1-202ENST00000393119 DEC1Q9P2X7 70 aa14.82□□□□□ -0.04
MKS1-202ENST00000393119 IL36AQ9UHA7 158 aa14.82□□□□□ -0.04
MKS1-202ENST00000393119 CRLS1Q9UJA2 301 aa14.82□□□□□ -0.04
MKS1-202ENST00000393119 RPL26L1Q9UNX3 145 aaKnown RBP14.82□□□□□ -0.04
MKS1-202ENST00000393119 PTGDR2Q9Y5Y4 395 aa14.82□□□□□ -0.04
MKS1-202ENST00000393119 SOBPA7XYQ1 873 aa14.82□□□□□ -0.04
MKS1-202ENST00000393119 KPNA3O00505 521 aaPredicted RBP14.82□□□□□ -0.04
MKS1-202ENST00000393119 ECI2O75521 394 aa14.82□□□□□ -0.04
MKS1-202ENST00000393119 SUPT7LO94864 414 aa14.82□□□□□ -0.04
MKS1-202ENST00000393119 POU2F2P09086 479 aa14.82□□□□□ -0.04
MKS1-202ENST00000393119 ACRV1P26436 265 aa14.82□□□□□ -0.04
MKS1-202ENST00000393119 SPAM1P38567 509 aa14.82□□□□□ -0.04
MKS1-202ENST00000393119 OPRD1P41143 372 aa14.82□□□□□ -0.04
MKS1-202ENST00000393119 KHDC1Q4VXA5 237 aaKnown RBP14.82□□□□□ -0.04
MKS1-202ENST00000393119 FNDC3BQ53EP0 1204 aaKnown RBP14.82□□□□□ -0.04
MKS1-202ENST00000393119 UNC50Q53HI1 259 aa14.82□□□□□ -0.04
MKS1-202ENST00000393119 CFAP157Q5JU67 520 aa14.82□□□□□ -0.04
MKS1-202ENST00000393119 ANO7Q6IWH7 933 aa14.82□□□□□ -0.04
MKS1-202ENST00000393119 USP45Q70EL2 814 aa14.82□□□□□ -0.04
MKS1-202ENST00000393119 SNX20Q7Z614 316 aa14.82□□□□□ -0.04
MKS1-202ENST00000393119 PHTF2Q8N3S3 785 aa14.82□□□□□ -0.04
MKS1-202ENST00000393119 POU5F2Q8N7G0 328 aa14.82□□□□□ -0.04
MKS1-202ENST00000393119 DCBLD1Q8N8Z6 715 aa14.82□□□□□ -0.04
MKS1-202ENST00000393119 TUBGCP5Q96RT8 1024 aa14.82□□□□□ -0.04
MKS1-202ENST00000393119 TCF12Q99081 682 aa14.82□□□□□ -0.04
MKS1-202ENST00000393119 ILKAPQ9H0C8 392 aaPredicted RBP14.82□□□□□ -0.04
MKS1-202ENST00000393119 GSTO2Q9H4Y5 243 aa14.82□□□□□ -0.04
MKS1-202ENST00000393119 ZFP14Q9HCL3 533 aa14.82□□□□□ -0.04
MKS1-202ENST00000393119 FAM8A1Q9UBU6 413 aa14.82□□□□□ -0.04
MKS1-202ENST00000393119 PLA2G4CQ9UP65 541 aa14.82□□□□□ -0.04
MKS1-202ENST00000393119 TBC1D3BA6NDS4 549 aa14.81□□□□□ -0.04
MKS1-202ENST00000393119 C16orf96A6NNT2 1141 aa14.81□□□□□ -0.04
MKS1-202ENST00000393119 PRMT5O14744 637 aaPredicted RBP14.81□□□□□ -0.04
MKS1-202ENST00000393119 SNUPNO95149 360 aaKnown RBP14.81□□□□□ -0.04
MKS1-202ENST00000393119 SLC25A14O95258 325 aaPredicted RBP14.81□□□□□ -0.04
MKS1-202ENST00000393119 RBP1P09455 135 aa14.81□□□□□ -0.04
MKS1-202ENST00000393119 NNMTP40261 264 aa14.81□□□□□ -0.04
MKS1-202ENST00000393119 PEX19P40855 299 aa14.81□□□□□ -0.04
MKS1-202ENST00000393119 PTGER3P43115 390 aa14.81□□□□□ -0.04
MKS1-202ENST00000393119 RAD51Q06609 339 aa14.81□□□□□ -0.04
MKS1-202ENST00000393119 ZNF234Q14588 700 aa14.81□□□□□ -0.04
MKS1-202ENST00000393119 RAB30Q15771 203 aa14.81□□□□□ -0.04
MKS1-202ENST00000393119 AP1ARQ63HQ0 302 aa14.81□□□□□ -0.04
MKS1-202ENST00000393119 PTRHD1Q6GMV3 140 aaKnown RBP14.81□□□□□ -0.04
MKS1-202ENST00000393119 RINLQ6ZS11 566 aa14.81□□□□□ -0.04
MKS1-202ENST00000393119 PARS2Q7L3T8 475 aaKnown RBP14.81□□□□□ -0.04
MKS1-202ENST00000393119 METTL3Q86U44 580 aaKnown RBP14.81□□□□□ -0.04
MKS1-202ENST00000393119 SNX31Q8N9S9 440 aa14.81□□□□□ -0.04
MKS1-202ENST00000393119 KDM1BQ8NB78 822 aa14.81□□□□□ -0.04
MKS1-202ENST00000393119 ZNF641Q96N77 438 aaPredicted RBP14.81□□□□□ -0.04
MKS1-202ENST00000393119 LYSMD1Q96S90 227 aa14.81□□□□□ -0.04
MKS1-202ENST00000393119 SLC2A11Q9BYW1 496 aa14.81□□□□□ -0.04
MKS1-202ENST00000393119 CACNA2D2Q9NY47 1150 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms