RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 TSPAN33Q86UF1 283 aa13.47□□□□□ -0.25
PTN-202ENST00000393083 PNPLA1Q8N8W4 532 aa13.47□□□□□ -0.25
PTN-202ENST00000393083 DNASE2BQ8WZ79 361 aa13.47□□□□□ -0.25
PTN-202ENST00000393083 FOXJ1Q92949 421 aa13.47□□□□□ -0.25
PTN-202ENST00000393083 EID2BQ96D98 161 aa13.47□□□□□ -0.25
PTN-202ENST00000393083 FAM122AQ96E09 287 aa13.47□□□□□ -0.25
PTN-202ENST00000393083 SCRN2Q96FV2 425 aa13.47□□□□□ -0.25
PTN-202ENST00000393083 MAGEB18Q96M61 343 aa13.47□□□□□ -0.25
PTN-202ENST00000393083 MCCC1Q96RQ3 725 aaPredicted RBP13.47□□□□□ -0.25
PTN-202ENST00000393083 NDNQ99608 321 aa13.47□□□□□ -0.25
PTN-202ENST00000393083 ORAI3Q9BRQ5 295 aa13.47□□□□□ -0.25
PTN-202ENST00000393083 GRID1Q9ULK0 1009 aa13.47□□□□□ -0.25
PTN-202ENST00000393083 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.47□□□□□ -0.25
PTN-202ENST00000393083 PLLPQ9Y342 182 aa13.47□□□□□ -0.25
PTN-202ENST00000393083 PCDHGA5Q9Y5G8 931 aa13.47□□□□□ -0.25
PTN-202ENST00000393083 FADS3Q9Y5Q0 445 aa13.47□□□□□ -0.25
PTN-202ENST00000393083 ZFHX2Q9C0A1 2572 aaPredicted RBP13.47□□□□□ -0.25
PTN-202ENST00000393083 FRYLO94915 3013 aa13.46□□□□□ -0.25
PTN-202ENST00000393083 GMNCA6NCL1 334 aa13.46□□□□□ -0.25
PTN-202ENST00000393083 LRRC72A6NJI9 287 aa13.46□□□□□ -0.25
PTN-202ENST00000393083 A8MX80 341 aa13.46□□□□□ -0.25
PTN-202ENST00000393083 UPK3BL1B0FP48 263 aa13.46□□□□□ -0.25
PTN-202ENST00000393083 UPK3BL2E5RIL1 263 aa13.46□□□□□ -0.25
PTN-202ENST00000393083 PHGDHO43175 533 aaKnown RBP13.46□□□□□ -0.25
PTN-202ENST00000393083 AP1G1O43747 822 aa13.46□□□□□ -0.25
PTN-202ENST00000393083 C2P06681 752 aa13.46□□□□□ -0.25
PTN-202ENST00000393083 STMN1P16949 149 aa13.46□□□□□ -0.25
PTN-202ENST00000393083 ITPKAP23677 461 aa13.46□□□□□ -0.25
PTN-202ENST00000393083 PMLP29590 882 aa13.46□□□□□ -0.25
PTN-202ENST00000393083 GMPRP36959 345 aa13.46□□□□□ -0.25
PTN-202ENST00000393083 ETV4P43268 484 aa13.46□□□□□ -0.25
PTN-202ENST00000393083 SLC12A2P55011 1212 aa13.46□□□□□ -0.25
PTN-202ENST00000393083 IRF9Q00978 393 aa13.46□□□□□ -0.25
PTN-202ENST00000393083 SEMG2Q02383 582 aa13.46□□□□□ -0.25
PTN-202ENST00000393083 PEX6Q13608 980 aa13.46□□□□□ -0.25
PTN-202ENST00000393083 LRRC66Q68CR7 880 aa13.46□□□□□ -0.25
PTN-202ENST00000393083 KIAA0895LQ68EN5 471 aa13.46□□□□□ -0.25
PTN-202ENST00000393083 FBXL19Q6PCT2 694 aa13.46□□□□□ -0.25
PTN-202ENST00000393083 CRTC1Q6UUV9 634 aa13.46□□□□□ -0.25
PTN-202ENST00000393083 SCG3Q8WXD2 468 aaKnown RBP13.46□□□□□ -0.25
PTN-202ENST00000393083 BIRC7Q96CA5 298 aa13.46□□□□□ -0.25
PTN-202ENST00000393083 CHMP6Q96FZ7 201 aa13.46□□□□□ -0.25
PTN-202ENST00000393083 ARRDC1-AS1Q9H2J1 176 aa13.46□□□□□ -0.25
PTN-202ENST00000393083 TMEM74BQ9NUR3 256 aa13.46□□□□□ -0.25
PTN-202ENST00000393083 INTS10Q9NVR2 710 aaKnown RBP13.46□□□□□ -0.25
PTN-202ENST00000393083 B4GALT6Q9UBX8 382 aa13.46□□□□□ -0.25
PTN-202ENST00000393083 DCDC2Q9UHG0 476 aa13.46□□□□□ -0.25
PTN-202ENST00000393083 GMEB2Q9UKD1 530 aa13.46□□□□□ -0.25
PTN-202ENST00000393083 PILRBQ9UKJ0 227 aa13.46□□□□□ -0.25
PTN-202ENST00000393083 CORO1CQ9ULV4 474 aaPredicted RBP13.46□□□□□ -0.25
PTN-202ENST00000393083 ANKRD6Q9Y2G4 727 aa13.46□□□□□ -0.25
PTN-202ENST00000393083 SLC30A1Q9Y6M5 507 aa13.46□□□□□ -0.25
PTN-202ENST00000393083 TNRC6BQ9UPQ9 1833 aaKnown RBP13.45□□□□□ -0.26
PTN-202ENST00000393083 TBC1D3DA0A087WVF3 549 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 TBC1D3IA0A087WXS9 549 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 TBC1D3EA0A087X179 549 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 TBC1D3KA0A087X1G2 549 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 TBC1D3FA6NER0 549 aaPredicted RBP13.45□□□□□ -0.26
PTN-202ENST00000393083 TBC1D3LB9A6J9 549 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 AREL1O15033 823 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 GFRA3O60609 400 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 TBC1D3HP0C7X1 549 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 DHRS4L1P0CG22 281 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 CYP2A6P11509 494 aaPredicted RBP13.45□□□□□ -0.26
PTN-202ENST00000393083 TGM1P22735 817 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 LHCGRP22888 699 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 XPAP23025 273 aaPredicted RBP13.45□□□□□ -0.26
PTN-202ENST00000393083 NFKBIAP25963 317 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 CSRP3P50461 194 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 CCR5P51681 352 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 TAS2R39P59534 338 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 RAB10P61026 200 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 PPP2CBP62714 309 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 PPP2CAP67775 309 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 XIAPP98170 497 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 POU4F1Q01851 419 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 CREB5Q02930 508 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 ILF2Q12905 390 aaKnown RBP13.45□□□□□ -0.26
PTN-202ENST00000393083 ZKSCAN8Q15776 578 aaPredicted RBP13.45□□□□□ -0.26
PTN-202ENST00000393083 INSCQ1MX18 579 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 AARS2Q5JTZ9 985 aaKnown RBP13.45□□□□□ -0.26
PTN-202ENST00000393083 PLA2G2CQ5R387 149 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 N4BP2L1Q5TBK1 243 aaPredicted RBP13.45□□□□□ -0.26
PTN-202ENST00000393083 HECTD2Q5U5R9 776 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 TBC1D3GQ6DHY5 549 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 TBC1D3CQ6IPX1 549 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 FAM45BPQ6NSW5 357 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 PSAPL1Q6NUJ1 521 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 NEK5Q6P3R8 708 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 FAM151BQ6UXP7 276 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 CYP2U1Q7Z449 544 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 TTC7BQ86TV6 843 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 TBC1D3Q8IZP1 549 aaPredicted RBP13.45□□□□□ -0.26
PTN-202ENST00000393083 ARMC2Q8NEN0 867 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 C1orf216Q8TAB5 229 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 FAM45AQ8TCE6 357 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.45□□□□□ -0.26
PTN-202ENST00000393083 RAB7BQ96AH8 199 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 C19orf43Q9BQ61 176 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 FAM107BQ9H098 131 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms