RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 REV1Q9UBZ9 1251 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 GMPPBQ9Y5P6 360 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 ARHGEF33A8MVX0 844 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 ERVH48-1M5A8F1 160 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 SLC30A4O14863 429 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 SLC22A2O15244 555 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 SEC14L2O76054 403 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 NPY2RP49146 381 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 FPGSQ05932 587 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 DAG1Q14118 895 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 SSX2Q16385 188 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 FAM83EQ2M2I3 478 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 BRMS1LQ5PSV4 323 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 BRAT1Q6PJG6 821 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 ADGRD2Q7Z7M1 963 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 WDR49Q8IV35 697 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 KRT78Q8N1N4 520 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 CCNYQ8ND76 341 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 FAM83FQ8NEG4 500 aaPredicted RBP7.58□□□□□ -1.2
VTI1A-201ENST00000393077 OR6F1Q8NGZ6 308 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 DNAJB14Q8TBM8 379 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 PCNPQ8WW12 178 aaKnown RBP7.58□□□□□ -1.2
VTI1A-201ENST00000393077 ATG4CQ96DT6 458 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 ZC3H10Q96K80 434 aaKnown RBP7.58□□□□□ -1.2
VTI1A-201ENST00000393077 NECTIN4Q96NY8 510 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 XPNPEP3Q9NQH7 507 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 AGPAT3Q9NRZ7 376 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 TRPM5Q9NZQ8 1165 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 EIF3KQ9UBQ5 218 aaKnown RBP7.58□□□□□ -1.2
VTI1A-201ENST00000393077 MGAT4BQ9UQ53 548 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 PRELID3BQ9Y3B1 194 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 CBY1Q9Y3M2 126 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 H0YAE9 185 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 XPNPEP2O43895 674 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 PLA2G6O60733 806 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 TGFB3P10600 412 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 FOSL2P15408 326 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 OGNP20774 298 aaKnown RBP7.58□□□□□ -1.2
VTI1A-201ENST00000393077 CBLP22681 906 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 RPS7P62081 194 aaKnown RBP7.58□□□□□ -1.2
VTI1A-201ENST00000393077 CSNK2BP67870 215 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 TOMM20Q15388 145 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 WSCD2Q2TBF2 565 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 EML3Q32P44 896 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 SLC36A3Q495N2 470 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 PADI6Q6TGC4 694 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 PRSS42Q7Z5A4 293 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 ZC3HC1Q86WB0 502 aaKnown RBP7.58□□□□□ -1.2
VTI1A-201ENST00000393077 YIPF7Q8N8F6 280 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 TP53I13Q8NBR0 393 aaPredicted RBP7.58□□□□□ -1.2
VTI1A-201ENST00000393077 SLC37A3Q8NCC5 494 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 TRIB2Q92519 343 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 MYLPFQ96A32 169 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 SLITRK1Q96PX8 696 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 BCL7BQ9BQE9 202 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 TEX12Q9BXU0 123 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 OR51B5Q9H339 312 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 TM9SF3Q9HD45 589 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 SIX2Q9NPC8 291 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 INTS10Q9NVR2 710 aaKnown RBP7.58□□□□□ -1.2
VTI1A-201ENST00000393077 BFARQ9NZS9 450 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 DPP7Q9UHL4 492 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 MAPRE3Q9UPY8 281 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 C5P01031 1676 aa7.57□□□□□ -1.2
VTI1A-201ENST00000393077 E9PAM4 449 aa7.57□□□□□ -1.2
VTI1A-201ENST00000393077 RASAL1O95294 804 aa7.57□□□□□ -1.2
VTI1A-201ENST00000393077 RPLP0P05388 317 aaKnown RBP7.57□□□□□ -1.2
VTI1A-201ENST00000393077 PGRP06401 933 aa7.57□□□□□ -1.2
VTI1A-201ENST00000393077 POLBP06746 335 aa7.57□□□□□ -1.2
VTI1A-201ENST00000393077 FDX1P10109 184 aa7.57□□□□□ -1.2
VTI1A-201ENST00000393077 JUPP14923 745 aa7.57□□□□□ -1.2
VTI1A-201ENST00000393077 ERCC2P18074 760 aa7.57□□□□□ -1.2
VTI1A-201ENST00000393077 DNAJB2P25686 324 aa7.57□□□□□ -1.2
VTI1A-201ENST00000393077 HTR1BP28222 390 aa7.57□□□□□ -1.2
VTI1A-201ENST00000393077 ADORA2AP29274 412 aa7.57□□□□□ -1.2
VTI1A-201ENST00000393077 GRIA4P48058 902 aa7.57□□□□□ -1.2
VTI1A-201ENST00000393077 STARP49675 285 aa7.57□□□□□ -1.2
VTI1A-201ENST00000393077 HERVK_113P63132 956 aa7.57□□□□□ -1.2
VTI1A-201ENST00000393077 FMO1Q01740 532 aa7.57□□□□□ -1.2
VTI1A-201ENST00000393077 KCNC4Q03721 635 aa7.57□□□□□ -1.2
VTI1A-201ENST00000393077 IFRD2Q12894 506 aaPredicted RBP7.57□□□□□ -1.2
VTI1A-201ENST00000393077 SMCO1Q147U7 214 aa7.57□□□□□ -1.2
VTI1A-201ENST00000393077 PDK2Q15119 407 aa7.57□□□□□ -1.2
VTI1A-201ENST00000393077 ZSWIM7Q19AV6 140 aa7.57□□□□□ -1.2
VTI1A-201ENST00000393077 LCN1P1Q5VSP4 162 aa7.57□□□□□ -1.2
VTI1A-201ENST00000393077 REP15Q6BDI9 236 aa7.57□□□□□ -1.2
VTI1A-201ENST00000393077 PM20D1Q6GTS8 502 aa7.57□□□□□ -1.2
VTI1A-201ENST00000393077 CRTC1Q6UUV9 634 aa7.57□□□□□ -1.2
VTI1A-201ENST00000393077 EPGNQ6UW88 154 aa7.57□□□□□ -1.2
VTI1A-201ENST00000393077 AHSA2Q719I0 299 aa7.57□□□□□ -1.2
VTI1A-201ENST00000393077 STON2Q8WXE9 905 aa7.57□□□□□ -1.2
VTI1A-201ENST00000393077 DIRAS2Q96HU8 199 aa7.57□□□□□ -1.2
VTI1A-201ENST00000393077 DOK1Q99704 481 aa7.57□□□□□ -1.2
VTI1A-201ENST00000393077 UGT2B28Q9BY64 529 aa7.57□□□□□ -1.2
VTI1A-201ENST00000393077 FAM49AQ9H0Q0 323 aaPredicted RBP7.57□□□□□ -1.2
VTI1A-201ENST00000393077 MMP28Q9H239 520 aa7.57□□□□□ -1.2
VTI1A-201ENST00000393077 ELP3Q9H9T3 547 aa7.57□□□□□ -1.2
VTI1A-201ENST00000393077 KMT5AQ9NQR1 393 aa7.57□□□□□ -1.2
VTI1A-201ENST00000393077 SLC9A8Q9Y2E8 581 aa7.57□□□□□ -1.2
VTI1A-201ENST00000393077 PRAMEF33A0A0G2JMD5 474 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms