RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 C5orf34Q96MH7 638 aa14.65□□□□□ -0.06
CCDC50-201ENST00000392455 CFL2Q9Y281 166 aa14.65□□□□□ -0.06
CCDC50-201ENST00000392455 SH3BGRLO75368 114 aa14.65□□□□□ -0.06
CCDC50-201ENST00000392455 RGS19P49795 217 aa14.65□□□□□ -0.06
CCDC50-201ENST00000392455 DHRS1Q96LJ7 313 aa14.65□□□□□ -0.06
CCDC50-201ENST00000392455 APBA2Q99767 749 aa14.65□□□□□ -0.06
CCDC50-201ENST00000392455 RRAGCQ9HB90 399 aa14.65□□□□□ -0.06
CCDC50-201ENST00000392455 CDHR5Q9HBB8 845 aa14.65□□□□□ -0.06
CCDC50-201ENST00000392455 KCNN3Q9UGI6 736 aa14.65□□□□□ -0.06
CCDC50-201ENST00000392455 TRAF6Q9Y4K3 522 aa14.65□□□□□ -0.06
CCDC50-201ENST00000392455 APOC4-APOC2K7ER74 178 aa14.65□□□□□ -0.06
CCDC50-201ENST00000392455 APOC2P02655 101 aa14.65□□□□□ -0.06
CCDC50-201ENST00000392455 INSRRP14616 1297 aa14.65□□□□□ -0.06
CCDC50-201ENST00000392455 DEFA5Q01523 94 aa14.65□□□□□ -0.06
CCDC50-201ENST00000392455 SPESP1Q6UW49 350 aa14.65□□□□□ -0.06
CCDC50-201ENST00000392455 ZSCAN4Q8NAM6 433 aaPredicted RBP14.65□□□□□ -0.06
CCDC50-201ENST00000392455 OR52K1Q8NGK4 314 aa14.65□□□□□ -0.06
CCDC50-201ENST00000392455 SEC14L1Q92503 715 aa14.65□□□□□ -0.06
CCDC50-201ENST00000392455 ANKHQ9HCJ1 492 aa14.65□□□□□ -0.06
CCDC50-201ENST00000392455 AMHP03971 560 aa14.65□□□□□ -0.06
CCDC50-201ENST00000392455 USP17L7P0C7H9 530 aa14.65□□□□□ -0.06
CCDC50-201ENST00000392455 ITPKBP27987 946 aa14.65□□□□□ -0.06
CCDC50-201ENST00000392455 MASP1P48740 699 aa14.65□□□□□ -0.06
CCDC50-201ENST00000392455 PLEKHG4Q58EX7 1191 aa14.65□□□□□ -0.06
CCDC50-201ENST00000392455 LINC00471Q8N535 108 aa14.65□□□□□ -0.06
CCDC50-201ENST00000392455 ZNF527Q8NB42 609 aa14.65□□□□□ -0.06
CCDC50-201ENST00000392455 C9orf43Q8TAL5 461 aaPredicted RBP14.65□□□□□ -0.06
CCDC50-201ENST00000392455 PDGFDQ9GZP0 370 aaPredicted RBP14.65□□□□□ -0.06
CCDC50-201ENST00000392455 GRHL1Q9NZI5 618 aa14.65□□□□□ -0.06
CCDC50-201ENST00000392455 SCN2BO60939 215 aa14.65□□□□□ -0.06
CCDC50-201ENST00000392455 TROAPQ12815 778 aa14.65□□□□□ -0.06
CCDC50-201ENST00000392455 AIMP2Q13155 320 aaKnown RBP14.65□□□□□ -0.06
CCDC50-201ENST00000392455 NBPF12Q5TAG4 269 aaPredicted RBP14.65□□□□□ -0.06
CCDC50-201ENST00000392455 RBM44Q6ZP01 1051 aaKnown RBP14.65□□□□□ -0.06
CCDC50-201ENST00000392455 RIOX2Q8IUF8 465 aa14.65□□□□□ -0.06
CCDC50-201ENST00000392455 ZNF433Q8N7K0 673 aaPredicted RBP14.65□□□□□ -0.06
CCDC50-201ENST00000392455 MYNNQ9NPC7 610 aa14.65□□□□□ -0.06
CCDC50-201ENST00000392455 ATG12O94817 140 aa14.64□□□□□ -0.07
CCDC50-201ENST00000392455 PRKAG1P54619 331 aa14.64□□□□□ -0.07
CCDC50-201ENST00000392455 SCGB2A2Q13296 93 aa14.64□□□□□ -0.07
CCDC50-201ENST00000392455 DCST1Q5T197 706 aa14.64□□□□□ -0.07
CCDC50-201ENST00000392455 CERCAMQ5T4B2 595 aa14.64□□□□□ -0.07
CCDC50-201ENST00000392455 NATD1Q8N6N6 113 aa14.64□□□□□ -0.07
CCDC50-201ENST00000392455 SUN3Q8TAQ9 357 aa14.64□□□□□ -0.07
CCDC50-201ENST00000392455 PGAP3Q96FM1 320 aaPredicted RBP14.64□□□□□ -0.07
CCDC50-201ENST00000392455 RAP2CQ9Y3L5 183 aa14.64□□□□□ -0.07
CCDC50-201ENST00000392455 TECPR2O15040 1411 aa14.64□□□□□ -0.07
CCDC50-201ENST00000392455 SPATA31A5Q5VU36 1347 aa14.64□□□□□ -0.07
CCDC50-201ENST00000392455 SPATA31A7Q8IWB4 1347 aa14.64□□□□□ -0.07
CCDC50-201ENST00000392455 PLD2O14939 933 aa14.64□□□□□ -0.07
CCDC50-201ENST00000392455 SLC22A3O75751 556 aa14.64□□□□□ -0.07
CCDC50-201ENST00000392455 CES3Q6UWW8 571 aa14.64□□□□□ -0.07
CCDC50-201ENST00000392455 ZNF280BQ86YH2 543 aa14.64□□□□□ -0.07
CCDC50-201ENST00000392455 PHYKPLQ8IUZ5 450 aa14.64□□□□□ -0.07
CCDC50-201ENST00000392455 OXR1Q8N573 874 aa14.64□□□□□ -0.07
CCDC50-201ENST00000392455 EFCAB3Q8N7B9 438 aa14.64□□□□□ -0.07
CCDC50-201ENST00000392455 NOX1Q9Y5S8 564 aa14.64□□□□□ -0.07
CCDC50-201ENST00000392455 GPR107Q5VW38 600 aa14.64□□□□□ -0.07
CCDC50-201ENST00000392455 ZNF410Q86VK4 478 aa14.64□□□□□ -0.07
CCDC50-201ENST00000392455 C4orf19Q8IY42 314 aa14.64□□□□□ -0.07
CCDC50-201ENST00000392455 ZNF565Q8N9K5 539 aa14.64□□□□□ -0.07
CCDC50-201ENST00000392455 ACTL9Q8TC94 416 aa14.64□□□□□ -0.07
CCDC50-201ENST00000392455 PYDC1Q8WXC3 89 aa14.64□□□□□ -0.07
CCDC50-201ENST00000392455 FAM83DQ9H4H8 585 aa14.64□□□□□ -0.07
CCDC50-201ENST00000392455 B3GAT2Q9NPZ5 323 aa14.64□□□□□ -0.07
CCDC50-201ENST00000392455 MDFIC2A0A1B0GVS7 189 aa14.64□□□□□ -0.07
CCDC50-201ENST00000392455 ADAMTS3O15072 1205 aa14.64□□□□□ -0.07
CCDC50-201ENST00000392455 MAFKO60675 156 aa14.64□□□□□ -0.07
CCDC50-201ENST00000392455 AKAP3O75969 853 aa14.64□□□□□ -0.07
CCDC50-201ENST00000392455 AGR2O95994 175 aa14.64□□□□□ -0.07
CCDC50-201ENST00000392455 DBIP07108 87 aaKnown RBP14.64□□□□□ -0.07
CCDC50-201ENST00000392455 YES1P07947 543 aa14.64□□□□□ -0.07
CCDC50-201ENST00000392455 PGAM2P15259 253 aa14.64□□□□□ -0.07
CCDC50-201ENST00000392455 TNFRSF8P28908 595 aa14.64□□□□□ -0.07
CCDC50-201ENST00000392455 BTG3Q14201 252 aaPredicted RBP14.64□□□□□ -0.07
CCDC50-201ENST00000392455 IFNL1Q8IU54 200 aa14.64□□□□□ -0.07
CCDC50-201ENST00000392455 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.64□□□□□ -0.07
CCDC50-201ENST00000392455 OR4C15Q8NGM1 316 aa14.64□□□□□ -0.07
CCDC50-201ENST00000392455 ELOVL2Q9NXB9 296 aa14.64□□□□□ -0.07
CCDC50-201ENST00000392455 ZNF175Q9Y473 711 aa14.64□□□□□ -0.07
CCDC50-201ENST00000392455 HERC3Q15034 1050 aa14.64□□□□□ -0.07
CCDC50-201ENST00000392455 SLC39A12Q504Y0 691 aa14.64□□□□□ -0.07
CCDC50-201ENST00000392455 FNBP1LQ5T0N5 605 aa14.64□□□□□ -0.07
CCDC50-201ENST00000392455 UNQ6126/PRO20091Q6UXV3 157 aa14.64□□□□□ -0.07
CCDC50-201ENST00000392455 C3P1Q6ZMU1 363 aa14.64□□□□□ -0.07
CCDC50-201ENST00000392455 S100A7AQ86SG5 101 aa14.64□□□□□ -0.07
CCDC50-201ENST00000392455 RENP00797 406 aa14.64□□□□□ -0.07
CCDC50-201ENST00000392455 GRIA2P42262 883 aa14.64□□□□□ -0.07
CCDC50-201ENST00000392455 MAGEA6P43360 314 aa14.64□□□□□ -0.07
CCDC50-201ENST00000392455 PTDSS1P48651 473 aaKnown RBP14.64□□□□□ -0.07
CCDC50-201ENST00000392455 OR51D1Q8NGF3 324 aa14.64□□□□□ -0.07
CCDC50-201ENST00000392455 OR2AJ1Q8NGZ0 328 aa14.64□□□□□ -0.07
CCDC50-201ENST00000392455 SCGB1C1Q8TD33 95 aa14.64□□□□□ -0.07
CCDC50-201ENST00000392455 NUDT15Q9NV35 164 aa14.64□□□□□ -0.07
CCDC50-201ENST00000392455 M0QX08 132 aa14.64□□□□□ -0.07
CCDC50-201ENST00000392455 PLEKHG6Q3KR16 790 aa14.64□□□□□ -0.07
CCDC50-201ENST00000392455 NAT14Q8WUY8 206 aa14.64□□□□□ -0.07
CCDC50-201ENST00000392455 ZDHHC6Q9H6R6 413 aa14.64□□□□□ -0.07
CCDC50-201ENST00000392455 MCCC2Q9HCC0 563 aa14.64□□□□□ -0.07
CCDC50-201ENST00000392455 FARSBQ9NSD9 589 aaKnown RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms