RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 SARS2Q9NP81 518 aaKnown RBP16.38■□□□□ 0.21
PTPRK-208ENST00000392449 TMPRSS11EQ9UL52 423 aa16.38■□□□□ 0.21
PTPRK-208ENST00000392449 DNAJC16Q9Y2G8 782 aa16.38■□□□□ 0.21
PTPRK-208ENST00000392449 A0A0A6YYK5 440 aaPredicted RBP16.37■□□□□ 0.21
PTPRK-208ENST00000392449 RGSL1A5PLK6 1076 aa16.37■□□□□ 0.21
PTPRK-208ENST00000392449 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.37■□□□□ 0.21
PTPRK-208ENST00000392449 CST8O60676 142 aa16.37■□□□□ 0.21
PTPRK-208ENST00000392449 F3P13726 295 aa16.37■□□□□ 0.21
PTPRK-208ENST00000392449 UGT1A3P35503 534 aa16.37■□□□□ 0.21
PTPRK-208ENST00000392449 WASHC5Q12768 1159 aa16.37■□□□□ 0.21
PTPRK-208ENST00000392449 TEX44Q53QW1 395 aa16.37■□□□□ 0.21
PTPRK-208ENST00000392449 ODF2Q5BJF6 829 aa16.37■□□□□ 0.21
PTPRK-208ENST00000392449 GLYATL1Q969I3 302 aa16.37■□□□□ 0.21
PTPRK-208ENST00000392449 RMI1Q9H9A7 625 aa16.37■□□□□ 0.21
PTPRK-208ENST00000392449 DDX56Q9NY93 547 aaKnown RBP16.37■□□□□ 0.21
PTPRK-208ENST00000392449 CPNE7Q9UBL6 633 aa16.37■□□□□ 0.21
PTPRK-208ENST00000392449 PCDHGA3Q9Y5H0 932 aa16.37■□□□□ 0.21
PTPRK-208ENST00000392449 SETXQ7Z333 2677 aaKnown RBP16.37■□□□□ 0.21
PTPRK-208ENST00000392449 B8ZZF3 427 aa16.36■□□□□ 0.21
PTPRK-208ENST00000392449 GPR39O43194 453 aa16.36■□□□□ 0.21
PTPRK-208ENST00000392449 NDST3O95803 873 aa16.36■□□□□ 0.21
PTPRK-208ENST00000392449 ZFXP17010 805 aaPredicted RBP16.36■□□□□ 0.21
PTPRK-208ENST00000392449 NFKB1P19838 968 aa16.36■□□□□ 0.21
PTPRK-208ENST00000392449 PTMSP20962 102 aa16.36■□□□□ 0.21
PTPRK-208ENST00000392449 CD82P27701 267 aa16.36■□□□□ 0.21
PTPRK-208ENST00000392449 CHRNA4P43681 627 aa16.36■□□□□ 0.21
PTPRK-208ENST00000392449 DCDC1P59894 354 aa16.36■□□□□ 0.21
PTPRK-208ENST00000392449 NFKB2Q00653 900 aa16.36■□□□□ 0.21
PTPRK-208ENST00000392449 NFATC3Q12968 1075 aa16.36■□□□□ 0.21
PTPRK-208ENST00000392449 TBX2Q13207 712 aaPredicted RBP16.36■□□□□ 0.21
PTPRK-208ENST00000392449 TAZQ16635 292 aa16.36■□□□□ 0.21
PTPRK-208ENST00000392449 SPOCD1Q6ZMY3 1216 aa16.36■□□□□ 0.21
PTPRK-208ENST00000392449 SLC9B2Q86UD5 537 aa16.36■□□□□ 0.21
PTPRK-208ENST00000392449 ZC3H18Q86VM9 953 aaKnown RBP16.36■□□□□ 0.21
PTPRK-208ENST00000392449 PHYKPLQ8IUZ5 450 aa16.36■□□□□ 0.21
PTPRK-208ENST00000392449 ZNF547Q8IVP9 402 aa16.36■□□□□ 0.21
PTPRK-208ENST00000392449 TRAM1L1Q8N609 369 aa16.36■□□□□ 0.21
PTPRK-208ENST00000392449 TEKT5Q96M29 485 aa16.36■□□□□ 0.21
PTPRK-208ENST00000392449 PLEKHG4BQ96PX9 1271 aa16.36■□□□□ 0.21
PTPRK-208ENST00000392449 HERPUD2Q9BSE4 406 aa16.36■□□□□ 0.21
PTPRK-208ENST00000392449 ZSCAN5AQ9BUG6 496 aa16.36■□□□□ 0.21
PTPRK-208ENST00000392449 TRIM39Q9HCM9 518 aa16.36■□□□□ 0.21
PTPRK-208ENST00000392449 APMAPQ9HDC9 416 aa16.36■□□□□ 0.21
PTPRK-208ENST00000392449 PDP2Q9P2J9 529 aa16.36■□□□□ 0.21
PTPRK-208ENST00000392449 AKR1B15C9JRZ8 316 aaPredicted RBP16.35■□□□□ 0.21
PTPRK-208ENST00000392449 J3QKU1 62 aa16.35■□□□□ 0.21
PTPRK-208ENST00000392449 LIFP15018 202 aa16.35■□□□□ 0.21
PTPRK-208ENST00000392449 CA5AP35218 305 aa16.35■□□□□ 0.21
PTPRK-208ENST00000392449 SLC1A1P43005 524 aa16.35■□□□□ 0.21
PTPRK-208ENST00000392449 GFERP55789 205 aa16.35■□□□□ 0.21
PTPRK-208ENST00000392449 UBE2IP63279 158 aaKnown RBP16.35■□□□□ 0.21
PTPRK-208ENST00000392449 TBR1Q16650 682 aa16.35■□□□□ 0.21
PTPRK-208ENST00000392449 INSCQ1MX18 579 aa16.35■□□□□ 0.21
PTPRK-208ENST00000392449 WDR74Q6RFH5 385 aaPredicted RBP16.35■□□□□ 0.21
PTPRK-208ENST00000392449 ARHGAP22Q7Z5H3 698 aa16.35■□□□□ 0.21
PTPRK-208ENST00000392449 SLC25A41Q8N5S1 370 aa16.35■□□□□ 0.21
PTPRK-208ENST00000392449 IL22RA1Q8N6P7 574 aa16.35■□□□□ 0.21
PTPRK-208ENST00000392449 TFB1MQ8WVM0 346 aaKnown RBP16.35■□□□□ 0.21
PTPRK-208ENST00000392449 DPYSL5Q9BPU6 564 aa16.35■□□□□ 0.21
PTPRK-208ENST00000392449 ARHGAP9Q9BRR9 750 aa16.35■□□□□ 0.21
PTPRK-208ENST00000392449 DDA1Q9BW61 102 aa16.35■□□□□ 0.21
PTPRK-208ENST00000392449 B3GNT4Q9C0J1 378 aa16.35■□□□□ 0.21
PTPRK-208ENST00000392449 C10orf88Q9H8K7 445 aa16.35■□□□□ 0.21
PTPRK-208ENST00000392449 OGFRQ9NZT2 677 aa16.35■□□□□ 0.21
PTPRK-208ENST00000392449 TRIM10Q9UDY6 481 aa16.35■□□□□ 0.21
PTPRK-208ENST00000392449 KIR2DS5A0A0G2JLQ3 304 aa16.35■□□□□ 0.21
PTPRK-208ENST00000392449 A0A0G2JNG1 304 aa16.35■□□□□ 0.21
PTPRK-208ENST00000392449 B4E171 279 aa16.35■□□□□ 0.21
PTPRK-208ENST00000392449 KIR2DS3K7RE56 304 aa16.35■□□□□ 0.21
PTPRK-208ENST00000392449 CHUKO15111 745 aa16.35■□□□□ 0.21
PTPRK-208ENST00000392449 BUD23O43709 281 aaKnown RBP16.35■□□□□ 0.21
PTPRK-208ENST00000392449 TYRP1P17643 537 aa16.35■□□□□ 0.21
PTPRK-208ENST00000392449 RPL10P27635 214 aaKnown RBP16.35■□□□□ 0.21
PTPRK-208ENST00000392449 TSPAN7P41732 249 aa16.35■□□□□ 0.21
PTPRK-208ENST00000392449 WNT3AP56704 352 aa16.35■□□□□ 0.21
PTPRK-208ENST00000392449 KIR2DS5Q14953 304 aa16.35■□□□□ 0.21
PTPRK-208ENST00000392449 CLCA4Q14CN2 919 aa16.35■□□□□ 0.21
PTPRK-208ENST00000392449 TCEAL1Q15170 157 aa16.35■□□□□ 0.21
PTPRK-208ENST00000392449 SKOR2Q2VWA4 1001 aaPredicted RBP16.35■□□□□ 0.21
PTPRK-208ENST00000392449 ATP13A5Q4VNC0 1218 aa16.35■□□□□ 0.21
PTPRK-208ENST00000392449 DCAF12Q5T6F0 453 aa16.35■□□□□ 0.21
PTPRK-208ENST00000392449 KDELC1Q6UW63 502 aa16.35■□□□□ 0.21
PTPRK-208ENST00000392449 CNGA4Q8IV77 575 aa16.35■□□□□ 0.21
PTPRK-208ENST00000392449 CCDC112Q8NEF3 446 aa16.35■□□□□ 0.21
PTPRK-208ENST00000392449 RTP4Q96DX8 246 aa16.35■□□□□ 0.21
PTPRK-208ENST00000392449 OXNAD1Q96HP4 312 aaPredicted RBP16.35■□□□□ 0.21
PTPRK-208ENST00000392449 STN1Q9H668 368 aaKnown RBP16.35■□□□□ 0.21
PTPRK-208ENST00000392449 ZNF624Q9P2J8 865 aaPredicted RBP16.35■□□□□ 0.21
PTPRK-208ENST00000392449 NFKBIL1Q9UBC1 381 aaPredicted RBP16.35■□□□□ 0.21
PTPRK-208ENST00000392449 INTUQ9ULD6 942 aa16.35■□□□□ 0.21
PTPRK-208ENST00000392449 ALG6Q9Y672 507 aa16.35■□□□□ 0.21
PTPRK-208ENST00000392449 SLC30A1Q9Y6M5 507 aa16.35■□□□□ 0.21
PTPRK-208ENST00000392449 ZNF106Q9H2Y7 1883 aaKnown RBP16.34■□□□□ 0.21
PTPRK-208ENST00000392449 PDZK1P1A8MUH7 402 aa16.34■□□□□ 0.21
PTPRK-208ENST00000392449 SLC28A2O43868 658 aa16.34■□□□□ 0.21
PTPRK-208ENST00000392449 RAD1O60671 282 aa16.34■□□□□ 0.21
PTPRK-208ENST00000392449 BRAFP15056 766 aa16.34■□□□□ 0.21
PTPRK-208ENST00000392449 ZNF7P17097 686 aaPredicted RBP16.34■□□□□ 0.21
PTPRK-208ENST00000392449 SLC19A1P41440 591 aa16.34■□□□□ 0.21
PTPRK-208ENST00000392449 MAGEA1P43355 309 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms