RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 PDLIM5Q96HC4 596 aaKnown RBP11.34□□□□□ -0.59
SMARCAL1-203ENST00000392128 RILPQ96NA2 401 aa11.34□□□□□ -0.59
SMARCAL1-203ENST00000392128 TRMOQ9BU70 441 aa11.34□□□□□ -0.59
SMARCAL1-203ENST00000392128 TUBB6Q9BUF5 446 aa11.34□□□□□ -0.59
SMARCAL1-203ENST00000392128 COG4Q9H9E3 785 aa11.34□□□□□ -0.59
SMARCAL1-203ENST00000392128 CYP4F12Q9HCS2 524 aa11.34□□□□□ -0.59
SMARCAL1-203ENST00000392128 ACSS2Q9NR19 701 aa11.34□□□□□ -0.59
SMARCAL1-203ENST00000392128 NFKBIL1Q9UBC1 381 aaPredicted RBP11.34□□□□□ -0.59
SMARCAL1-203ENST00000392128 VTI1BQ9UEU0 232 aa11.34□□□□□ -0.59
SMARCAL1-203ENST00000392128 SORCS3Q9UPU3 1222 aa11.34□□□□□ -0.59
SMARCAL1-203ENST00000392128 APOBEC2Q9Y235 224 aaKnown RBP11.34□□□□□ -0.59
SMARCAL1-203ENST00000392128 CFAP73A6NFT4 308 aa11.34□□□□□ -0.59
SMARCAL1-203ENST00000392128 C16orf96A6NNT2 1141 aa11.34□□□□□ -0.59
SMARCAL1-203ENST00000392128 HNRNPCL1O60812 293 aaKnown RBP11.34□□□□□ -0.59
SMARCAL1-203ENST00000392128 T-ENOLP0DO92 83 aa11.34□□□□□ -0.59
SMARCAL1-203ENST00000392128 LAMP2P13473 410 aa11.34□□□□□ -0.59
SMARCAL1-203ENST00000392128 GJA4P35212 333 aa11.34□□□□□ -0.59
SMARCAL1-203ENST00000392128 NSG1P42857 185 aa11.34□□□□□ -0.59
SMARCAL1-203ENST00000392128 HERVK_113P63132 956 aa11.34□□□□□ -0.59
SMARCAL1-203ENST00000392128 GRM2Q14416 872 aa11.34□□□□□ -0.59
SMARCAL1-203ENST00000392128 ZNF678Q5SXM1 525 aa11.34□□□□□ -0.59
SMARCAL1-203ENST00000392128 C9orf64Q5T6V5 341 aa11.34□□□□□ -0.59
SMARCAL1-203ENST00000392128 FRMD7Q6ZUT3 714 aa11.34□□□□□ -0.59
SMARCAL1-203ENST00000392128 TTC7BQ86TV6 843 aa11.34□□□□□ -0.59
SMARCAL1-203ENST00000392128 TMIEQ8NEW7 156 aa11.34□□□□□ -0.59
SMARCAL1-203ENST00000392128 PHF21BQ96EK2 531 aa11.34□□□□□ -0.59
SMARCAL1-203ENST00000392128 CCDC97Q96F63 343 aaPredicted RBP11.34□□□□□ -0.59
SMARCAL1-203ENST00000392128 LINGO1Q96FE5 620 aa11.34□□□□□ -0.59
SMARCAL1-203ENST00000392128 PRR11Q96HE9 360 aaPredicted RBP11.34□□□□□ -0.59
SMARCAL1-203ENST00000392128 ERVK-6Q9BXR3 956 aa11.34□□□□□ -0.59
SMARCAL1-203ENST00000392128 TMEM245Q9H330 911 aa11.34□□□□□ -0.59
SMARCAL1-203ENST00000392128 EML4Q9HC35 981 aaKnown RBP11.34□□□□□ -0.59
SMARCAL1-203ENST00000392128 RAD18Q9NS91 495 aa11.34□□□□□ -0.59
SMARCAL1-203ENST00000392128 ZDHHC3Q9NYG2 299 aa11.34□□□□□ -0.59
SMARCAL1-203ENST00000392128 LMCD1Q9NZU5 365 aa11.34□□□□□ -0.59
SMARCAL1-203ENST00000392128 ZDHHC2Q9UIJ5 367 aa11.34□□□□□ -0.59
SMARCAL1-203ENST00000392128 PRSS21Q9Y6M0 314 aa11.34□□□□□ -0.59
SMARCAL1-203ENST00000392128 REV3LO60673 3130 aa11.33□□□□□ -0.6
SMARCAL1-203ENST00000392128 IGLV3-16A0A075B6K0 115 aa11.33□□□□□ -0.6
SMARCAL1-203ENST00000392128 RGSL1A5PLK6 1076 aa11.33□□□□□ -0.6
SMARCAL1-203ENST00000392128 SYCE1LA8MT33 242 aa11.33□□□□□ -0.6
SMARCAL1-203ENST00000392128 IQCF5A8MTL0 148 aa11.33□□□□□ -0.6
SMARCAL1-203ENST00000392128 HDAC3O15379 428 aa11.33□□□□□ -0.6
SMARCAL1-203ENST00000392128 XPAP23025 273 aaPredicted RBP11.33□□□□□ -0.6
SMARCAL1-203ENST00000392128 TARSP26639 723 aaKnown RBP11.33□□□□□ -0.6
SMARCAL1-203ENST00000392128 RALGDSQ12967 914 aa11.33□□□□□ -0.6
SMARCAL1-203ENST00000392128 ELAVL3Q14576 367 aaKnown RBP11.33□□□□□ -0.6
SMARCAL1-203ENST00000392128 ZNF234Q14588 700 aa11.33□□□□□ -0.6
SMARCAL1-203ENST00000392128 ATP13A5Q4VNC0 1218 aa11.33□□□□□ -0.6
SMARCAL1-203ENST00000392128 SEL1L3Q68CR1 1132 aa11.33□□□□□ -0.6
SMARCAL1-203ENST00000392128 RFLNAQ6ZTI6 216 aa11.33□□□□□ -0.6
SMARCAL1-203ENST00000392128 CPNE9Q8IYJ1 553 aa11.33□□□□□ -0.6
SMARCAL1-203ENST00000392128 EEF1AKMT1Q8WVE0 214 aa11.33□□□□□ -0.6
SMARCAL1-203ENST00000392128 UCMAQ8WVF2 138 aa11.33□□□□□ -0.6
SMARCAL1-203ENST00000392128 OR8D1Q8WZ84 308 aa11.33□□□□□ -0.6
SMARCAL1-203ENST00000392128 INPP5DQ92835 1189 aa11.33□□□□□ -0.6
SMARCAL1-203ENST00000392128 FUBP1Q96AE4 644 aaKnown RBP11.33□□□□□ -0.6
SMARCAL1-203ENST00000392128 RIPOR3Q96MK2 946 aa11.33□□□□□ -0.6
SMARCAL1-203ENST00000392128 GSTO2Q9H4Y5 243 aa11.33□□□□□ -0.6
SMARCAL1-203ENST00000392128 SMOXQ9NWM0 555 aa11.33□□□□□ -0.6
SMARCAL1-203ENST00000392128 GTSE1Q9NYZ3 720 aa11.33□□□□□ -0.6
SMARCAL1-203ENST00000392128 IKZF3Q9UKT9 509 aa11.33□□□□□ -0.6
SMARCAL1-203ENST00000392128 RNF112Q9ULX5 631 aa11.33□□□□□ -0.6
SMARCAL1-203ENST00000392128 TMCO1Q9UM00 188 aa11.33□□□□□ -0.6
SMARCAL1-203ENST00000392128 SZT2Q5T011 3432 aa11.33□□□□□ -0.6
SMARCAL1-203ENST00000392128 C5orf42Q9H799 3197 aa11.33□□□□□ -0.6
SMARCAL1-203ENST00000392128 UBXN8O00124 270 aa11.33□□□□□ -0.6
SMARCAL1-203ENST00000392128 BTN3A1O00481 513 aa11.33□□□□□ -0.6
SMARCAL1-203ENST00000392128 KLK8O60259 260 aa11.33□□□□□ -0.6
SMARCAL1-203ENST00000392128 TBX10O75333 385 aa11.33□□□□□ -0.6
SMARCAL1-203ENST00000392128 ECI2O75521 394 aa11.33□□□□□ -0.6
SMARCAL1-203ENST00000392128 CBX6O95503 412 aa11.33□□□□□ -0.6
SMARCAL1-203ENST00000392128 MMP12P39900 470 aa11.33□□□□□ -0.6
SMARCAL1-203ENST00000392128 TSNQ15631 228 aaKnown RBP11.33□□□□□ -0.6
SMARCAL1-203ENST00000392128 TBCCQ15814 346 aa11.33□□□□□ -0.6
SMARCAL1-203ENST00000392128 PREPLQ4J6C6 727 aaPredicted RBP11.33□□□□□ -0.6
SMARCAL1-203ENST00000392128 ERAP2Q6P179 960 aa11.33□□□□□ -0.6
SMARCAL1-203ENST00000392128 PARM1Q6UWI2 310 aa11.33□□□□□ -0.6
SMARCAL1-203ENST00000392128 PARS2Q7L3T8 475 aaKnown RBP11.33□□□□□ -0.6
SMARCAL1-203ENST00000392128 HSD11B1LQ7Z5J1 315 aa11.33□□□□□ -0.6
SMARCAL1-203ENST00000392128 RAB44Q7Z6P3 723 aaPredicted RBP11.33□□□□□ -0.6
SMARCAL1-203ENST00000392128 KIRREL3Q8IZU9 778 aa11.33□□□□□ -0.6
SMARCAL1-203ENST00000392128 PTGR2Q8N8N7 351 aaPredicted RBP11.33□□□□□ -0.6
SMARCAL1-203ENST00000392128 PPM1EQ8WY54 764 aa11.33□□□□□ -0.6
SMARCAL1-203ENST00000392128 KLHL29Q96CT2 875 aa11.33□□□□□ -0.6
SMARCAL1-203ENST00000392128 COPS8Q99627 209 aa11.33□□□□□ -0.6
SMARCAL1-203ENST00000392128 KXD1Q9BQD3 176 aa11.33□□□□□ -0.6
SMARCAL1-203ENST00000392128 LRMDAQ9H2I8 198 aa11.33□□□□□ -0.6
SMARCAL1-203ENST00000392128 SARS2Q9NP81 518 aaKnown RBP11.33□□□□□ -0.6
SMARCAL1-203ENST00000392128 LATS2Q9NRM7 1088 aa11.33□□□□□ -0.6
SMARCAL1-203ENST00000392128 LNPEPQ9UIQ6 1025 aa11.33□□□□□ -0.6
SMARCAL1-203ENST00000392128 PPM1HQ9ULR3 514 aa11.33□□□□□ -0.6
SMARCAL1-203ENST00000392128 TBC1D3BA6NDS4 549 aa11.32□□□□□ -0.6
SMARCAL1-203ENST00000392128 NPEPPSL1A6NEC2 478 aa11.32□□□□□ -0.6
SMARCAL1-203ENST00000392128 CAPN14A8MX76 684 aa11.32□□□□□ -0.6
SMARCAL1-203ENST00000392128 H0YHG0 523 aa11.32□□□□□ -0.6
SMARCAL1-203ENST00000392128 CDC7O00311 574 aa11.32□□□□□ -0.6
SMARCAL1-203ENST00000392128 GRID2O43424 1007 aa11.32□□□□□ -0.6
SMARCAL1-203ENST00000392128 DIAPH2O60879 1101 aa11.32□□□□□ -0.6
SMARCAL1-203ENST00000392128 HLA-EP13747 358 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms