RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 GCNT6Q5T4J0 391 aa16.05■□□□□ 0.16
SHANK1-204ENST00000391814 RAP1GAP2Q684P5 730 aa16.05■□□□□ 0.16
SHANK1-204ENST00000391814 RHOJQ9H4E5 214 aa16.05■□□□□ 0.16
SHANK1-204ENST00000391814 FBXO44Q9H4M3 255 aa16.05■□□□□ 0.16
SHANK1-204ENST00000391814 TRBC1P01850 177 aa16.04■□□□□ 0.16
SHANK1-204ENST00000391814 PSEN1P49768 467 aa16.04■□□□□ 0.16
SHANK1-204ENST00000391814 NOMO1Q15155 1222 aa16.04■□□□□ 0.16
SHANK1-204ENST00000391814 GPR158Q5T848 1215 aa16.04■□□□□ 0.16
SHANK1-204ENST00000391814 TXNRD3Q86VQ6 643 aa16.04■□□□□ 0.16
SHANK1-204ENST00000391814 SLC9A6Q92581 669 aa16.04■□□□□ 0.16
SHANK1-204ENST00000391814 TBC1D14Q9P2M4 693 aa16.04■□□□□ 0.16
SHANK1-204ENST00000391814 RABL2AQ9UBK7 228 aaPredicted RBP16.04■□□□□ 0.16
SHANK1-204ENST00000391814 RAB23Q9ULC3 237 aa16.04■□□□□ 0.16
SHANK1-204ENST00000391814 PRH1P02810 166 aa16.04■□□□□ 0.16
SHANK1-204ENST00000391814 MAGEA12P43365 314 aa16.04■□□□□ 0.16
SHANK1-204ENST00000391814 CDH12P55289 794 aa16.04■□□□□ 0.16
SHANK1-204ENST00000391814 CPTPQ5TA50 214 aa16.04■□□□□ 0.16
SHANK1-204ENST00000391814 FAM92BQ6ZTR7 304 aa16.04■□□□□ 0.16
SHANK1-204ENST00000391814 TDRPQ86YL5 185 aa16.04■□□□□ 0.16
SHANK1-204ENST00000391814 HJURPQ8NCD3 748 aaPredicted RBP16.04■□□□□ 0.16
SHANK1-204ENST00000391814 KCNC2Q96PR1 638 aa16.04■□□□□ 0.16
SHANK1-204ENST00000391814 CKMP06732 381 aa16.04■□□□□ 0.16
SHANK1-204ENST00000391814 NPR2P20594 1047 aa16.04■□□□□ 0.16
SHANK1-204ENST00000391814 PRKD1Q15139 912 aaPredicted RBP16.04■□□□□ 0.16
SHANK1-204ENST00000391814 SLC39A12Q504Y0 691 aa16.04■□□□□ 0.16
SHANK1-204ENST00000391814 RNASEH2BQ5TBB1 312 aaKnown RBP16.04■□□□□ 0.16
SHANK1-204ENST00000391814 C1orf189Q5VU69 101 aa16.04■□□□□ 0.16
SHANK1-204ENST00000391814 LIX1Q8N485 282 aa16.04■□□□□ 0.16
SHANK1-204ENST00000391814 OR5K1Q8NHB7 308 aa16.04■□□□□ 0.16
SHANK1-204ENST00000391814 ZFP28Q8NHY6 868 aa16.04■□□□□ 0.16
SHANK1-204ENST00000391814 EDARQ9UNE0 448 aa16.04■□□□□ 0.16
SHANK1-204ENST00000391814 WNT7AO00755 349 aa16.04■□□□□ 0.16
SHANK1-204ENST00000391814 CCNB2O95067 398 aa16.04■□□□□ 0.16
SHANK1-204ENST00000391814 ENTPD1P49961 510 aa16.04■□□□□ 0.16
SHANK1-204ENST00000391814 HAS1Q92839 578 aa16.04■□□□□ 0.16
SHANK1-204ENST00000391814 MSANTD3Q96H12 275 aa16.04■□□□□ 0.16
SHANK1-204ENST00000391814 AGAP2Q99490 1192 aa16.04■□□□□ 0.16
SHANK1-204ENST00000391814 PAK6Q9NQU5 681 aaPredicted RBP16.04■□□□□ 0.16
SHANK1-204ENST00000391814 POLR3BQ9NW08 1133 aaPredicted RBP16.04■□□□□ 0.16
SHANK1-204ENST00000391814 ZNF135P52742 658 aaPredicted RBP16.04■□□□□ 0.16
SHANK1-204ENST00000391814 ATP6V0D1P61421 351 aa16.04■□□□□ 0.16
SHANK1-204ENST00000391814 GNASQ5JWF2 1037 aa16.04■□□□□ 0.16
SHANK1-204ENST00000391814 USP45Q70EL2 814 aa16.04■□□□□ 0.16
SHANK1-204ENST00000391814 SLC26A9Q7LBE3 791 aa16.04■□□□□ 0.16
SHANK1-204ENST00000391814 RIOX2Q8IUF8 465 aa16.04■□□□□ 0.16
SHANK1-204ENST00000391814 TRAPPC5Q8IUR0 188 aa16.04■□□□□ 0.16
SHANK1-204ENST00000391814 BPIFB1Q8TDL5 484 aa16.04■□□□□ 0.16
SHANK1-204ENST00000391814 AZIN2Q96A70 460 aa16.04■□□□□ 0.16
SHANK1-204ENST00000391814 ZFP3Q96NJ6 502 aa16.04■□□□□ 0.16
SHANK1-204ENST00000391814 TSSK3Q96PN8 268 aa16.04■□□□□ 0.16
SHANK1-204ENST00000391814 LRTM1Q9HBL6 345 aa16.04■□□□□ 0.16
SHANK1-204ENST00000391814 FBXO5Q9UKT4 447 aa16.04■□□□□ 0.16
SHANK1-204ENST00000391814 MC4RP32245 332 aa16.04■□□□□ 0.16
SHANK1-204ENST00000391814 CDH4P55283 916 aa16.04■□□□□ 0.16
SHANK1-204ENST00000391814 SETMARQ53H47 684 aaPredicted RBP16.04■□□□□ 0.16
SHANK1-204ENST00000391814 P2RY11Q96G91 374 aa16.04■□□□□ 0.16
SHANK1-204ENST00000391814 DCSTAMPQ9H295 470 aa16.04■□□□□ 0.16
SHANK1-204ENST00000391814 ABCC13Q9NSE7 274 aa16.04■□□□□ 0.16
SHANK1-204ENST00000391814 MAFFQ9ULX9 164 aa16.04■□□□□ 0.16
SHANK1-204ENST00000391814 FKBP7Q9Y680 259 aa16.04■□□□□ 0.16
SHANK1-204ENST00000391814 PIP5K1BO14986 540 aa16.03■□□□□ 0.16
SHANK1-204ENST00000391814 RBMXL2O75526 392 aaKnown RBP16.03■□□□□ 0.16
SHANK1-204ENST00000391814 MYCLP1P12525 358 aaPredicted RBP16.03■□□□□ 0.16
SHANK1-204ENST00000391814 TPSB2P20231 275 aa16.03■□□□□ 0.16
SHANK1-204ENST00000391814 RPL3P39023 403 aaKnown RBP16.03■□□□□ 0.16
SHANK1-204ENST00000391814 CLCN2P51788 898 aa16.03■□□□□ 0.16
SHANK1-204ENST00000391814 MTPNP58546 118 aa16.03■□□□□ 0.16
SHANK1-204ENST00000391814 IRF9Q00978 393 aa16.03■□□□□ 0.16
SHANK1-204ENST00000391814 TPSAB1Q15661 275 aa16.03■□□□□ 0.16
SHANK1-204ENST00000391814 PLEKHG6Q3KR16 790 aa16.03■□□□□ 0.16
SHANK1-204ENST00000391814 AGMOQ6ZNB7 445 aa16.03■□□□□ 0.16
SHANK1-204ENST00000391814 SHC3Q92529 594 aa16.03■□□□□ 0.16
SHANK1-204ENST00000391814 ISOC1Q96CN7 298 aa16.03■□□□□ 0.16
SHANK1-204ENST00000391814 DNAJC11Q9NVH1 559 aa16.03■□□□□ 0.16
SHANK1-204ENST00000391814 M0R036 132 aa16.03■□□□□ 0.16
SHANK1-204ENST00000391814 TPST2O60704 377 aa16.03■□□□□ 0.16
SHANK1-204ENST00000391814 HOXB6P17509 224 aaKnown RBP16.03■□□□□ 0.16
SHANK1-204ENST00000391814 PTPN1P18031 435 aaKnown RBP16.03■□□□□ 0.16
SHANK1-204ENST00000391814 CAMK1Q14012 370 aa16.03■□□□□ 0.16
SHANK1-204ENST00000391814 NT5DC4Q86YG4 428 aa16.03■□□□□ 0.16
SHANK1-204ENST00000391814 BARD1Q99728 777 aaKnown RBP16.03■□□□□ 0.16
SHANK1-204ENST00000391814 ANKRA2Q9H9E1 313 aa16.03■□□□□ 0.16
SHANK1-204ENST00000391814 KCNMB3Q9NPA1 279 aa16.03■□□□□ 0.16
SHANK1-204ENST00000391814 PCDHB12Q9Y5F1 795 aa16.03■□□□□ 0.16
SHANK1-204ENST00000391814 ILVBLA1L0T0 632 aa16.03■□□□□ 0.16
SHANK1-204ENST00000391814 IFNGP01579 166 aa16.03■□□□□ 0.16
SHANK1-204ENST00000391814 AMHP03971 560 aa16.03■□□□□ 0.16
SHANK1-204ENST00000391814 ADRA2BP18089 450 aa16.03■□□□□ 0.16
SHANK1-204ENST00000391814 PFKPQ01813 784 aa16.03■□□□□ 0.16
SHANK1-204ENST00000391814 GRM3Q14832 879 aa16.03■□□□□ 0.16
SHANK1-204ENST00000391814 ZNF829Q3KNS6 432 aaPredicted RBP16.03■□□□□ 0.16
SHANK1-204ENST00000391814 ZDHHC21Q8IVQ6 265 aa16.03■□□□□ 0.16
SHANK1-204ENST00000391814 FCGR1BQ92637 280 aa16.03■□□□□ 0.16
SHANK1-204ENST00000391814 NSMCE3Q96MG7 304 aa16.03■□□□□ 0.16
SHANK1-204ENST00000391814 KCTD15Q96SI1 283 aaPredicted RBP16.03■□□□□ 0.16
SHANK1-204ENST00000391814 ITPAQ9BY32 194 aa16.03■□□□□ 0.16
SHANK1-204ENST00000391814 PCDH18Q9HCL0 1135 aa16.03■□□□□ 0.16
SHANK1-204ENST00000391814 STARD7Q9NQZ5 370 aa16.03■□□□□ 0.16
SHANK1-204ENST00000391814 RDH8Q9NYR8 311 aa16.03■□□□□ 0.16
SHANK1-204ENST00000391814 SLC7A1P30825 629 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms