RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 VPS4AQ9UN37 437 aa19.57■□□□□ 0.72
SHANK1-203ENST00000391813 ST3GAL5Q9UNP4 418 aa19.57■□□□□ 0.72
SHANK1-203ENST00000391813 SH3PXD2BA1X283 911 aa19.57■□□□□ 0.72
SHANK1-203ENST00000391813 BCAS2O75934 225 aaPredicted RBP19.57■□□□□ 0.72
SHANK1-203ENST00000391813 GNPDA1P46926 289 aa19.57■□□□□ 0.72
SHANK1-203ENST00000391813 CAPSQ13938 189 aa19.57■□□□□ 0.72
SHANK1-203ENST00000391813 ALFQ53S48 1182 aa19.57■□□□□ 0.72
SHANK1-203ENST00000391813 C6orf183Q5T699 404 aa19.57■□□□□ 0.72
SHANK1-203ENST00000391813 HECTD2Q5U5R9 776 aa19.57■□□□□ 0.72
SHANK1-203ENST00000391813 RALGPS2Q86X27 583 aaPredicted RBP19.57■□□□□ 0.72
SHANK1-203ENST00000391813 GTF2A1LQ9UNN4 478 aa19.57■□□□□ 0.72
SHANK1-203ENST00000391813 CFL2Q9Y281 166 aa19.57■□□□□ 0.72
SHANK1-203ENST00000391813 RIPK3Q9Y572 518 aa19.57■□□□□ 0.72
SHANK1-203ENST00000391813 OR10H3O60404 316 aa19.57■□□□□ 0.72
SHANK1-203ENST00000391813 SELPP16109 830 aa19.57■□□□□ 0.72
SHANK1-203ENST00000391813 RUNDC3AQ59EK9 446 aa19.57■□□□□ 0.72
SHANK1-203ENST00000391813 RASSF6Q6ZTQ3 369 aa19.57■□□□□ 0.72
SHANK1-203ENST00000391813 VN1R5Q7Z5H4 357 aa19.57■□□□□ 0.72
SHANK1-203ENST00000391813 FSTL5Q8N475 847 aaPredicted RBP19.57■□□□□ 0.72
SHANK1-203ENST00000391813 CARNMT1Q8N4J0 409 aa19.57■□□□□ 0.72
SHANK1-203ENST00000391813 SLC25A13Q9UJS0 675 aa19.57■□□□□ 0.72
SHANK1-203ENST00000391813 MT-ND1P03886 318 aa19.56■□□□□ 0.72
SHANK1-203ENST00000391813 SCNN1GP51170 649 aa19.56■□□□□ 0.72
SHANK1-203ENST00000391813 KIAA0319LQ8IZA0 1049 aa19.56■□□□□ 0.72
SHANK1-203ENST00000391813 ZNF614Q8N883 585 aa19.56■□□□□ 0.72
SHANK1-203ENST00000391813 NIPA2Q8N8Q9 360 aa19.56■□□□□ 0.72
SHANK1-203ENST00000391813 LRRN4Q8WUT4 740 aa19.56■□□□□ 0.72
SHANK1-203ENST00000391813 BRI3BPQ8WY22 251 aa19.56■□□□□ 0.72
SHANK1-203ENST00000391813 PKP2Q99959 881 aa19.56■□□□□ 0.72
SHANK1-203ENST00000391813 TMEM138Q9NPI0 162 aa19.56■□□□□ 0.72
SHANK1-203ENST00000391813 J3QRK9 145 aa19.56■□□□□ 0.72
SHANK1-203ENST00000391813 ENDOD1O94919 500 aa19.56■□□□□ 0.72
SHANK1-203ENST00000391813 DLDP09622 509 aaKnown RBP19.56■□□□□ 0.72
SHANK1-203ENST00000391813 PTGS2P35354 604 aa19.56■□□□□ 0.72
SHANK1-203ENST00000391813 ARMC12Q5T9G4 340 aa19.56■□□□□ 0.72
SHANK1-203ENST00000391813 UBE2E3Q969T4 207 aa19.56■□□□□ 0.72
SHANK1-203ENST00000391813 FBXL8Q96CD0 374 aa19.56■□□□□ 0.72
SHANK1-203ENST00000391813 PIGUQ9H490 435 aa19.56■□□□□ 0.72
SHANK1-203ENST00000391813 ZW10O43264 779 aa19.56■□□□□ 0.72
SHANK1-203ENST00000391813 B4GALT4O60513 344 aa19.56■□□□□ 0.72
SHANK1-203ENST00000391813 CLK2P49760 499 aaKnown RBP19.56■□□□□ 0.72
SHANK1-203ENST00000391813 CDH15P55291 814 aa19.56■□□□□ 0.72
SHANK1-203ENST00000391813 AP5B1Q2VPB7 878 aa19.56■□□□□ 0.72
SHANK1-203ENST00000391813 TRMT10BQ6PF06 316 aaKnown RBP19.56■□□□□ 0.72
SHANK1-203ENST00000391813 PEX5LQ8IYB4 626 aa19.56■□□□□ 0.72
SHANK1-203ENST00000391813 LRRC52Q8N7C0 313 aa19.56■□□□□ 0.72
SHANK1-203ENST00000391813 OR4L1Q8NH43 312 aa19.56■□□□□ 0.72
SHANK1-203ENST00000391813 CANT1Q8WVQ1 401 aa19.56■□□□□ 0.72
SHANK1-203ENST00000391813 PCDHAC1Q9H158 963 aa19.56■□□□□ 0.72
SHANK1-203ENST00000391813 SLC9A8Q9Y2E8 581 aa19.56■□□□□ 0.72
SHANK1-203ENST00000391813 A0A1W2PRG6 482 aa19.56■□□□□ 0.72
SHANK1-203ENST00000391813 TNFSF9P41273 254 aa19.56■□□□□ 0.72
SHANK1-203ENST00000391813 ZNF423Q2M1K9 1284 aa19.56■□□□□ 0.72
SHANK1-203ENST00000391813 SLC9B1Q4ZJI4 515 aa19.56■□□□□ 0.72
SHANK1-203ENST00000391813 TRPV5Q9NQA5 729 aa19.56■□□□□ 0.72
SHANK1-203ENST00000391813 CHRAC1Q9NRG0 131 aa19.56■□□□□ 0.72
SHANK1-203ENST00000391813 ARHGEF33A8MVX0 844 aa19.55■□□□□ 0.72
SHANK1-203ENST00000391813 PSIP1O75475 530 aaKnown RBP19.55■□□□□ 0.72
SHANK1-203ENST00000391813 SLC6A2P23975 617 aa19.55■□□□□ 0.72
SHANK1-203ENST00000391813 EEFSECP57772 596 aaKnown RBP19.55■□□□□ 0.72
SHANK1-203ENST00000391813 MRPS5P82675 430 aaKnown RBP19.55■□□□□ 0.72
SHANK1-203ENST00000391813 DDI2Q5TDH0 399 aa19.55■□□□□ 0.72
SHANK1-203ENST00000391813 CDCA2Q69YH5 1023 aaPredicted RBP19.55■□□□□ 0.72
SHANK1-203ENST00000391813 SLC9A4Q6AI14 798 aa19.55■□□□□ 0.72
SHANK1-203ENST00000391813 ASRGL1Q7L266 308 aa19.55■□□□□ 0.72
SHANK1-203ENST00000391813 MEIOBQ8N635 442 aa19.55■□□□□ 0.72
SHANK1-203ENST00000391813 BIRC8Q96P09 236 aa19.55■□□□□ 0.72
SHANK1-203ENST00000391813 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.55■□□□□ 0.72
SHANK1-203ENST00000391813 TIMM13Q9Y5L4 95 aaPredicted RBP19.55■□□□□ 0.72
SHANK1-203ENST00000391813 MAPKAPK2P49137 400 aa19.55■□□□□ 0.72
SHANK1-203ENST00000391813 GNA13Q14344 377 aa19.55■□□□□ 0.72
SHANK1-203ENST00000391813 EML3Q32P44 896 aa19.55■□□□□ 0.72
SHANK1-203ENST00000391813 ZC3H7AQ8IWR0 971 aaKnown RBP19.55■□□□□ 0.72
SHANK1-203ENST00000391813 OR52L1Q8NGH7 329 aa19.55■□□□□ 0.72
SHANK1-203ENST00000391813 MTFMTQ96DP5 389 aaKnown RBP19.55■□□□□ 0.72
SHANK1-203ENST00000391813 GMLQ99445 158 aa19.55■□□□□ 0.72
SHANK1-203ENST00000391813 FEM1AQ9BSK4 669 aa19.55■□□□□ 0.72
SHANK1-203ENST00000391813 TTYH1Q9H313 450 aaPredicted RBP19.55■□□□□ 0.72
SHANK1-203ENST00000391813 TRIM64CA6NLI5 447 aa19.55■□□□□ 0.72
SHANK1-203ENST00000391813 TYROBPO43914 113 aa19.55■□□□□ 0.72
SHANK1-203ENST00000391813 FABP3P05413 133 aa19.55■□□□□ 0.72
SHANK1-203ENST00000391813 ADRA1BP35368 520 aa19.55■□□□□ 0.72
SHANK1-203ENST00000391813 PTPN9P43378 593 aa19.55■□□□□ 0.72
SHANK1-203ENST00000391813 HSF2Q03933 536 aa19.55■□□□□ 0.72
SHANK1-203ENST00000391813 PPIGQ13427 754 aaKnown RBP eCLIP19.55■□□□□ 0.72
SHANK1-203ENST00000391813 SEMA5AQ13591 1074 aa19.55■□□□□ 0.72
SHANK1-203ENST00000391813 XKR5Q6UX68 686 aa19.55■□□□□ 0.72
SHANK1-203ENST00000391813 R3HCC1LQ7Z5L2 792 aaKnown RBP19.55■□□□□ 0.72
SHANK1-203ENST00000391813 ZCCHC2Q9C0B9 1178 aaKnown RBP19.55■□□□□ 0.72
SHANK1-203ENST00000391813 OAZ3Q9UMX2 235 aa19.55■□□□□ 0.72
SHANK1-203ENST00000391813 PCP4L1A6NKN8 68 aa19.55■□□□□ 0.72
SHANK1-203ENST00000391813 PGLSO95336 258 aa19.55■□□□□ 0.72
SHANK1-203ENST00000391813 BMP10O95393 424 aa19.55■□□□□ 0.72
SHANK1-203ENST00000391813 GNAZP19086 355 aa19.55■□□□□ 0.72
SHANK1-203ENST00000391813 GDF10P55107 478 aa19.55■□□□□ 0.72
SHANK1-203ENST00000391813 PAOXQ6QHF9 649 aa19.55■□□□□ 0.72
SHANK1-203ENST00000391813 ZNF467Q7Z7K2 595 aaPredicted RBP19.55■□□□□ 0.72
SHANK1-203ENST00000391813 OR5K1Q8NHB7 308 aa19.55■□□□□ 0.72
SHANK1-203ENST00000391813 NUSAP1Q9BXS6 441 aaKnown RBP19.55■□□□□ 0.72
SHANK1-203ENST00000391813 MFHAS1Q9Y4C4 1052 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms