RNA–Protein interactions for RNA: ENST00000390520.1

TRAJ17-201, Transcript of T cell receptor alpha joining 17, humanhuman

APPRIS P1 BASIC

Gene TRAJ17, Length 63 nt, Biotype TR J gene, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ17-201ENST00000390520 LRRC42Q9Y546 428 aa3.37□□□□□ -1.87
TRAJ17-201ENST00000390520 PCDHA1Q9Y5I3 950 aa3.37□□□□□ -1.87
TRAJ17-201ENST00000390520 TRBV23OR9-2A0A075B6M9 112 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 A0A0B4J293 547 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 A0A0U1RQJ8 604 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 FAM240BA0A1B0GVZ2 78 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 MEX3AA1L020 520 aaKnown RBP3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 OR2W5A6NFC9 320 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 FAM90A7PA6NKC0 464 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 SDR42E2A6NKP2 422 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 FAM90A22PA8MWA6 464 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 FAM90A12PA8MX19 464 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 FAM90A23PA8MXZ1 464 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 AGPSO00116 658 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 HAS3O00219 553 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 NRP1O14786 923 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 ANKRD28O15084 1053 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 AP5Z1O43299 807 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 DHHO43323 396 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 WIPF1O43516 503 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 KLK8O60259 260 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 SNNO75324 88 aaPredicted RBP3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 NDUFS6O75380 124 aaKnown RBP3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 SAP30O75446 220 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 WBP4O75554 376 aaKnown RBP3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 LEFTY1O75610 366 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 GPX5O75715 221 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 CABYRO75952 493 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 RPP14O95059 124 aaKnown RBP3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 GAS8O95995 478 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 CALCAP01258 141 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 APOEP02649 317 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 CXCL10P02778 98 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 LCATP04180 440 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 GNAI2P04899 355 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 THBS1P07996 1170 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 CHRM2P08172 466 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 KRT19P08727 400 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 H2AFB2P0C5Z0 115 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 FTH1P19P0C7X4 201 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 UBTFL1P0CB47 393 aaPredicted RBP3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 CYP2C9P11712 490 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 GSPT1P15170 499 aaKnown RBP3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 FOSL2P15408 326 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 GNSP15586 552 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 NR1D1P20393 614 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 M6PRP20645 277 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 TUBG1P23258 451 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 CYP2F1P24903 491 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 HLA-FP30511 346 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 APOBEC3AP31941 199 aaPredicted RBP3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 RYKP34925 604 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 HMGCLP35914 325 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 CDKN1AP38936 164 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 CASRP41180 1078 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 SLC1A4P43007 532 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 MAGEA9P43362 315 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 CHRNA4P43681 627 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 CASP4P49662 377 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 JAK3P52333 1124 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 COPB1P53618 953 aaKnown RBP3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 ANTXR2P58335 489 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 SKP1P63208 163 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 ATP11AP98196 1134 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 CDC42EP1Q00587 391 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 GLO1Q04760 184 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 RING1Q06587 406 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 GCKRQ14397 625 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 GPR176Q14439 515 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 MVPQ14764 893 aaKnown RBP3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 PTPRRQ15256 657 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 STILQ15468 1287 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 GPR19Q15760 415 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 PDK4Q16654 411 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 MAPK6Q16659 721 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 PNLIPRP3Q17RR3 467 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 SKIDA1Q1XH10 827 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 KLHL38Q2WGJ6 581 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 SPATS1Q496A3 300 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 SLC44A4Q53GD3 710 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 TEX44Q53QW1 395 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 TMEM41BQ5BJD5 291 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 PRRT3Q5FWE3 981 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 ARSJQ5FYB0 599 aaPredicted RBP3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 EOGTQ5NDL2 527 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 MARCH8Q5T0T0 291 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 WLSQ5T9L3 541 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 MLIPQ5VWP3 458 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 BTBD8Q5XKL5 378 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 SLC9A4Q6AI14 798 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 KIAA0930Q6ICG6 404 aaPredicted RBP3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 MRNIPQ6NTE8 343 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 RINT1Q6NUQ1 792 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 DENND1BQ6P3S1 775 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 TMEM71Q6P5X7 295 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 RFWD3Q6PCD5 774 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 TMEM88Q6PEY1 159 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 TSSK4Q6SA08 328 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 NDUFAF7Q7L592 441 aa3.36□□□□□ -1.87
TRAJ17-201ENST00000390520 FAM122BQ7Z309 247 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms