RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 EIF3BP55884 814 aaKnown RBP3.09□□□□□ -1.91
TRAV40-201ENST00000390467 CEBPZQ03701 1054 aaKnown RBP3.09□□□□□ -1.91
TRAV40-201ENST00000390467 CDC16Q13042 620 aa3.09□□□□□ -1.91
TRAV40-201ENST00000390467 BIRC3Q13489 604 aa3.09□□□□□ -1.91
TRAV40-201ENST00000390467 OLIG2Q13516 323 aa3.09□□□□□ -1.91
TRAV40-201ENST00000390467 NSUN5P2Q63ZY6 315 aa3.09□□□□□ -1.91
TRAV40-201ENST00000390467 CDC73Q6P1J9 531 aa3.09□□□□□ -1.91
TRAV40-201ENST00000390467 ESX1Q8N693 406 aa3.09□□□□□ -1.91
TRAV40-201ENST00000390467 MMABQ96EY8 250 aaPredicted RBP3.09□□□□□ -1.91
TRAV40-201ENST00000390467 OXNAD1Q96HP4 312 aaPredicted RBP3.09□□□□□ -1.91
TRAV40-201ENST00000390467 ZNF599Q96NL3 588 aa3.09□□□□□ -1.91
TRAV40-201ENST00000390467 PRKRIP1Q9H875 184 aaPredicted RBP3.09□□□□□ -1.91
TRAV40-201ENST00000390467 TRPC7Q9HCX4 862 aa3.09□□□□□ -1.91
TRAV40-201ENST00000390467 COPG2Q9UBF2 871 aa3.09□□□□□ -1.91
TRAV40-201ENST00000390467 CNOT8Q9UFF9 292 aaKnown RBP3.09□□□□□ -1.91
TRAV40-201ENST00000390467 ACAD8Q9UKU7 415 aa3.09□□□□□ -1.91
TRAV40-201ENST00000390467 A0A087X002 238 aa3.08□□□□□ -1.92
TRAV40-201ENST00000390467 IGKV3D-20A0A0C4DH25 116 aa3.08□□□□□ -1.92
TRAV40-201ENST00000390467 CCDC196A0A1B0GTZ2 297 aa3.08□□□□□ -1.92
TRAV40-201ENST00000390467 A0A1W2PPI3 338 aa3.08□□□□□ -1.92
TRAV40-201ENST00000390467 A0A1W2PQF6 199 aa3.08□□□□□ -1.92
TRAV40-201ENST00000390467 NPIPB15A6NHN6 443 aaPredicted RBP3.08□□□□□ -1.92
TRAV40-201ENST00000390467 KRTAP16-1A8MUX0 517 aa3.08□□□□□ -1.92
TRAV40-201ENST00000390467 HHLA1C9JL84 531 aa3.08□□□□□ -1.92
TRAV40-201ENST00000390467 NR5A2O00482 541 aa3.08□□□□□ -1.92
TRAV40-201ENST00000390467 ATP2A1O14983 1001 aa3.08□□□□□ -1.92
TRAV40-201ENST00000390467 PAGE4O60829 102 aa3.08□□□□□ -1.92
TRAV40-201ENST00000390467 CRLF1O75462 422 aa3.08□□□□□ -1.92
TRAV40-201ENST00000390467 PDE9AO76083 593 aa3.08□□□□□ -1.92
TRAV40-201ENST00000390467 ZNF23P17027 643 aa3.08□□□□□ -1.92
TRAV40-201ENST00000390467 ACVR2BQ13705 512 aa3.08□□□□□ -1.92
TRAV40-201ENST00000390467 KIR2DS3Q14952 304 aa3.08□□□□□ -1.92
TRAV40-201ENST00000390467 LPAL2Q16609 132 aa3.08□□□□□ -1.92
TRAV40-201ENST00000390467 RAB6CQ53S08 254 aa3.08□□□□□ -1.92
TRAV40-201ENST00000390467 PLEKHM3Q6ZWE6 761 aa3.08□□□□□ -1.92
TRAV40-201ENST00000390467 OR1J2Q8NGS2 313 aa3.08□□□□□ -1.92
TRAV40-201ENST00000390467 ASCL2Q99929 193 aa3.08□□□□□ -1.92
TRAV40-201ENST00000390467 PSD2Q9BQI7 771 aa3.08□□□□□ -1.92
TRAV40-201ENST00000390467 STRA6Q9BX79 667 aa3.08□□□□□ -1.92
TRAV40-201ENST00000390467 PAIP1Q9H074 479 aaKnown RBP3.08□□□□□ -1.92
TRAV40-201ENST00000390467 RAB6CQ9H0N0 254 aa3.08□□□□□ -1.92
TRAV40-201ENST00000390467 BICC1Q9H694 974 aaKnown RBP3.08□□□□□ -1.92
TRAV40-201ENST00000390467 WASH6PQ9NQA3 447 aa3.08□□□□□ -1.92
TRAV40-201ENST00000390467 STK39Q9UEW8 545 aa3.08□□□□□ -1.92
TRAV40-201ENST00000390467 OR14J1Q9UGF5 321 aa3.08□□□□□ -1.92
TRAV40-201ENST00000390467 ARHGAP26Q9UNA1 814 aa3.08□□□□□ -1.92
TRAV40-201ENST00000390467 C2CD2Q9Y426 696 aa3.08□□□□□ -1.92
TRAV40-201ENST00000390467 JRKLQ9Y4A0 524 aa3.08□□□□□ -1.92
TRAV40-201ENST00000390467 EIF3CLB5ME19 914 aaKnown RBP3.07□□□□□ -1.92
TRAV40-201ENST00000390467 SYNCRIPO60506 623 aaKnown RBP3.07□□□□□ -1.92
TRAV40-201ENST00000390467 ZNF821O75541 412 aaPredicted RBP3.07□□□□□ -1.92
TRAV40-201ENST00000390467 NR3C1P04150 777 aa3.07□□□□□ -1.92
TRAV40-201ENST00000390467 ICAM1P05362 532 aa3.07□□□□□ -1.92
TRAV40-201ENST00000390467 MSH3P20585 1137 aa3.07□□□□□ -1.92
TRAV40-201ENST00000390467 ELF1P32519 619 aa3.07□□□□□ -1.92
TRAV40-201ENST00000390467 PBX3P40426 434 aa3.07□□□□□ -1.92
TRAV40-201ENST00000390467 DCTN2Q13561 401 aaKnown RBP3.07□□□□□ -1.92
TRAV40-201ENST00000390467 FRG1Q14331 258 aaKnown RBP3.07□□□□□ -1.92
TRAV40-201ENST00000390467 ZNF805Q5CZA5 627 aa3.07□□□□□ -1.92
TRAV40-201ENST00000390467 INO80CQ6PI98 192 aaPredicted RBP3.07□□□□□ -1.92
TRAV40-201ENST00000390467 SDCCAG8Q86SQ7 713 aaPredicted RBP3.07□□□□□ -1.92
TRAV40-201ENST00000390467 ZNF843Q8N446 348 aa3.07□□□□□ -1.92
TRAV40-201ENST00000390467 UTP15Q8TED0 518 aaKnown RBP3.07□□□□□ -1.92
TRAV40-201ENST00000390467 ZNF473Q8WTR7 871 aaKnown RBP3.07□□□□□ -1.92
TRAV40-201ENST00000390467 RRP36Q96EU6 259 aaKnown RBP3.07□□□□□ -1.92
TRAV40-201ENST00000390467 ABHD8Q96I13 439 aa3.07□□□□□ -1.92
TRAV40-201ENST00000390467 EGLN2Q96KS0 407 aa3.07□□□□□ -1.92
TRAV40-201ENST00000390467 HARBI1Q96MB7 349 aa3.07□□□□□ -1.92
TRAV40-201ENST00000390467 TMEM68Q96MH6 324 aa3.07□□□□□ -1.92
TRAV40-201ENST00000390467 SLX1AQ9BQ83 275 aa3.07□□□□□ -1.92
TRAV40-201ENST00000390467 LRRFIP2Q9Y608 721 aaKnown RBP3.07□□□□□ -1.92
TRAV40-201ENST00000390467 MAU2Q9Y6X3 613 aa3.07□□□□□ -1.92
TRAV40-201ENST00000390467 A0A0G2JNG1 304 aa3.06□□□□□ -1.92
TRAV40-201ENST00000390467 A0A1W2PRG0 241 aa3.06□□□□□ -1.92
TRAV40-201ENST00000390467 DUXAA6NLW8 204 aa3.06□□□□□ -1.92
TRAV40-201ENST00000390467 EIF4E1BA6NMX2 242 aaKnown RBP3.06□□□□□ -1.92
TRAV40-201ENST00000390467 SLC22A2O15244 555 aa3.06□□□□□ -1.92
TRAV40-201ENST00000390467 KRT5P13647 590 aa3.06□□□□□ -1.92
TRAV40-201ENST00000390467 NR2F2P24468 414 aa3.06□□□□□ -1.92
TRAV40-201ENST00000390467 MAP2K2P36507 400 aa3.06□□□□□ -1.92
TRAV40-201ENST00000390467 RGS2P41220 211 aa3.06□□□□□ -1.92
TRAV40-201ENST00000390467 OLR1P78380 273 aa3.06□□□□□ -1.92
TRAV40-201ENST00000390467 TMEM115Q12893 351 aaPredicted RBP3.06□□□□□ -1.92
TRAV40-201ENST00000390467 KIR2DS5Q14953 304 aa3.06□□□□□ -1.92
TRAV40-201ENST00000390467 PNLIPRP3Q17RR3 467 aa3.06□□□□□ -1.92
TRAV40-201ENST00000390467 LRIF1Q5T3J3 769 aa3.06□□□□□ -1.92
TRAV40-201ENST00000390467 SEPT14Q6ZU15 432 aa3.06□□□□□ -1.92
TRAV40-201ENST00000390467 LONP2Q86WA8 852 aa3.06□□□□□ -1.92
TRAV40-201ENST00000390467 ARMC8Q8IUR7 673 aa3.06□□□□□ -1.92
TRAV40-201ENST00000390467 PM20D2Q8IYS1 436 aa3.06□□□□□ -1.92
TRAV40-201ENST00000390467 RASGEF1CQ8N431 466 aa3.06□□□□□ -1.92
TRAV40-201ENST00000390467 GBGT1Q8N5D6 347 aa3.06□□□□□ -1.92
TRAV40-201ENST00000390467 MYRIPQ8NFW9 859 aa3.06□□□□□ -1.92
TRAV40-201ENST00000390467 WDR20Q8TBZ3 569 aa3.06□□□□□ -1.92
TRAV40-201ENST00000390467 METTL6Q8TCB7 284 aa3.06□□□□□ -1.92
TRAV40-201ENST00000390467 HM13Q8TCT9 377 aa3.06□□□□□ -1.92
TRAV40-201ENST00000390467 DNAAF4Q8WXU2 420 aa3.06□□□□□ -1.92
TRAV40-201ENST00000390467 ZUFSPQ96AP4 578 aa3.06□□□□□ -1.92
TRAV40-201ENST00000390467 ANKRD9Q96BM1 317 aaPredicted RBP3.06□□□□□ -1.92
TRAV40-201ENST00000390467 INTS12Q96CB8 462 aaKnown RBP3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms