RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 ESR1P03372 595 aa12.08□□□□□ -0.48
SPTBN1-203ENST00000389980 ADRB3P13945 408 aa12.08□□□□□ -0.48
SPTBN1-203ENST00000389980 HNRNPLP14866 589 aaKnown RBP eCLIP12.08□□□□□ -0.481e-7■□□□□ 10
SPTBN1-203ENST00000389980 CD1DP15813 335 aa12.08□□□□□ -0.48
SPTBN1-203ENST00000389980 GM2AP17900 193 aa12.08□□□□□ -0.48
SPTBN1-203ENST00000389980 CCR10P46092 362 aa12.08□□□□□ -0.48
SPTBN1-203ENST00000389980 OCRLQ01968 901 aa12.08□□□□□ -0.48
SPTBN1-203ENST00000389980 ACOX1Q15067 660 aa12.08□□□□□ -0.48
SPTBN1-203ENST00000389980 GPR33Q49SQ1 333 aa12.08□□□□□ -0.48
SPTBN1-203ENST00000389980 ZYG11AQ6WRX3 759 aa12.08□□□□□ -0.48
SPTBN1-203ENST00000389980 ISCA2Q86U28 154 aa12.08□□□□□ -0.48
SPTBN1-203ENST00000389980 LCA5Q86VQ0 697 aa12.08□□□□□ -0.48
SPTBN1-203ENST00000389980 RFWD2Q8NHY2 731 aa12.08□□□□□ -0.48
SPTBN1-203ENST00000389980 CD200R1Q8TD46 325 aa12.08□□□□□ -0.48
SPTBN1-203ENST00000389980 HCAR2Q8TDS4 363 aa12.08□□□□□ -0.48
SPTBN1-203ENST00000389980 PLEKHG4BQ96PX9 1271 aa12.08□□□□□ -0.48
SPTBN1-203ENST00000389980 C19orf43Q9BQ61 176 aa12.08□□□□□ -0.48
SPTBN1-203ENST00000389980 RIOK2Q9BVS4 552 aaKnown RBP12.08□□□□□ -0.48
SPTBN1-203ENST00000389980 FAM83DQ9H4H8 585 aa12.08□□□□□ -0.48
SPTBN1-203ENST00000389980 OXSMQ9NWU1 459 aa12.08□□□□□ -0.48
SPTBN1-203ENST00000389980 MARCOQ9UEW3 520 aaPredicted RBP12.08□□□□□ -0.48
SPTBN1-203ENST00000389980 MBD1Q9UIS9 605 aaPredicted RBP12.08□□□□□ -0.48
SPTBN1-203ENST00000389980 DCTN4Q9UJW0 460 aa12.08□□□□□ -0.48
SPTBN1-203ENST00000389980 PIAS3Q9Y6X2 628 aa12.08□□□□□ -0.48
SPTBN1-203ENST00000389980 VCANP13611 3396 aa12.08□□□□□ -0.48
SPTBN1-203ENST00000389980 COL4A2P08572 1712 aa12.08□□□□□ -0.48
SPTBN1-203ENST00000389980 TRPM6Q9BX84 2022 aa12.08□□□□□ -0.48
SPTBN1-203ENST00000389980 CCDC189A1A4V9 331 aa12.08□□□□□ -0.48
SPTBN1-203ENST00000389980 AGAP14A8MT82 685 aa12.08□□□□□ -0.48
SPTBN1-203ENST00000389980 H0YHG0 523 aa12.08□□□□□ -0.48
SPTBN1-203ENST00000389980 VPS26AO75436 327 aa12.08□□□□□ -0.48
SPTBN1-203ENST00000389980 APOA4P06727 396 aa12.08□□□□□ -0.48
SPTBN1-203ENST00000389980 ZNF7P17097 686 aaPredicted RBP12.08□□□□□ -0.48
SPTBN1-203ENST00000389980 P2RY2P41231 377 aa12.08□□□□□ -0.48
SPTBN1-203ENST00000389980 SLC1A6P48664 564 aa12.08□□□□□ -0.48
SPTBN1-203ENST00000389980 ADARP55265 1226 aaKnown RBP12.08□□□□□ -0.48
SPTBN1-203ENST00000389980 B4GALNT1Q00973 533 aa12.08□□□□□ -0.48
SPTBN1-203ENST00000389980 MLLT1Q03111 559 aaPredicted RBP12.08□□□□□ -0.48
SPTBN1-203ENST00000389980 CNTN1Q12860 1018 aa12.08□□□□□ -0.48
SPTBN1-203ENST00000389980 SMAD4Q13485 552 aaKnown RBP12.08□□□□□ -0.48
SPTBN1-203ENST00000389980 ITIH4Q14624 930 aa12.08□□□□□ -0.48
SPTBN1-203ENST00000389980 ACAP2Q15057 778 aa12.08□□□□□ -0.48
SPTBN1-203ENST00000389980 PTRHD1Q6GMV3 140 aaKnown RBP12.08□□□□□ -0.48
SPTBN1-203ENST00000389980 KIAA1211LQ6NV74 962 aa12.08□□□□□ -0.48
SPTBN1-203ENST00000389980 RBFAQ8N0V3 343 aa12.08□□□□□ -0.48
SPTBN1-203ENST00000389980 TXNDC5Q8NBS9 432 aaKnown RBP12.08□□□□□ -0.48
SPTBN1-203ENST00000389980 EXT2Q93063 718 aa12.08□□□□□ -0.48
SPTBN1-203ENST00000389980 MIEF2Q96C03 454 aa12.08□□□□□ -0.48
SPTBN1-203ENST00000389980 CYP4F12Q9HCS2 524 aa12.08□□□□□ -0.48
SPTBN1-203ENST00000389980 DYRK4Q9NR20 520 aa12.08□□□□□ -0.48
SPTBN1-203ENST00000389980 TRMT6Q9UJA5 497 aaKnown RBP12.08□□□□□ -0.48
SPTBN1-203ENST00000389980 OAS3Q9Y6K5 1087 aaKnown RBP12.08□□□□□ -0.48
SPTBN1-203ENST00000389980 FADS2P1A8MWK0 482 aa12.07□□□□□ -0.48
SPTBN1-203ENST00000389980 NEMP1O14524 444 aa12.07□□□□□ -0.48
SPTBN1-203ENST00000389980 MID1O15344 667 aa12.07□□□□□ -0.48
SPTBN1-203ENST00000389980 TRIM13O60858 407 aa12.07□□□□□ -0.48
SPTBN1-203ENST00000389980 MMP20O60882 483 aa12.07□□□□□ -0.48
SPTBN1-203ENST00000389980 TRIM16O95361 564 aa12.07□□□□□ -0.48
SPTBN1-203ENST00000389980 SERPINE1P05121 402 aa12.07□□□□□ -0.48
SPTBN1-203ENST00000389980 PPARGP37231 505 aaPredicted RBP12.07□□□□□ -0.48
SPTBN1-203ENST00000389980 TNFRSF4P43489 277 aa12.07□□□□□ -0.48
SPTBN1-203ENST00000389980 CLCN7P51798 805 aa12.07□□□□□ -0.48
SPTBN1-203ENST00000389980 PTPN5P54829 565 aa12.07□□□□□ -0.48
SPTBN1-203ENST00000389980 ENPP2Q13822 863 aa12.07□□□□□ -0.48
SPTBN1-203ENST00000389980 OR4D1Q15615 310 aa12.07□□□□□ -0.48
SPTBN1-203ENST00000389980 ZNF648Q5T619 568 aaPredicted RBP12.07□□□□□ -0.48
SPTBN1-203ENST00000389980 FBXW10Q5XX13 1052 aa12.07□□□□□ -0.48
SPTBN1-203ENST00000389980 KLC3Q6P597 504 aa12.07□□□□□ -0.48
SPTBN1-203ENST00000389980 ERN2Q76MJ5 926 aaKnown RBP12.07□□□□□ -0.48
SPTBN1-203ENST00000389980 DET1Q7L5Y6 550 aa12.07□□□□□ -0.48
SPTBN1-203ENST00000389980 TECPR1Q7Z6L1 1165 aa12.07□□□□□ -0.48
SPTBN1-203ENST00000389980 CPNE9Q8IYJ1 553 aa12.07□□□□□ -0.48
SPTBN1-203ENST00000389980 PELI3Q8N2H9 469 aa12.07□□□□□ -0.48
SPTBN1-203ENST00000389980 EEF1AKMT1Q8WVE0 214 aa12.07□□□□□ -0.48
SPTBN1-203ENST00000389980 PPP1R16AQ96I34 528 aa12.07□□□□□ -0.48
SPTBN1-203ENST00000389980 RMDN2Q96LZ7 410 aa12.07□□□□□ -0.48
SPTBN1-203ENST00000389980 TTC1Q99614 292 aa12.07□□□□□ -0.48
SPTBN1-203ENST00000389980 CDX2Q99626 313 aaPredicted RBP12.07□□□□□ -0.48
SPTBN1-203ENST00000389980 GATA5Q9BWX5 397 aaPredicted RBP12.07□□□□□ -0.48
SPTBN1-203ENST00000389980 SLC6A17Q9H1V8 727 aa12.07□□□□□ -0.48
SPTBN1-203ENST00000389980 ACTR5Q9H9F9 607 aaPredicted RBP12.07□□□□□ -0.48
SPTBN1-203ENST00000389980 POPDC3Q9HBV1 291 aa12.07□□□□□ -0.48
SPTBN1-203ENST00000389980 C1QTNF3-AMACRE9PGA6 284 aa12.06□□□□□ -0.48
SPTBN1-203ENST00000389980 AREL1O15033 823 aa12.06□□□□□ -0.48
SPTBN1-203ENST00000389980 PYGLP06737 847 aa12.06□□□□□ -0.48
SPTBN1-203ENST00000389980 NFKBIAP25963 317 aa12.06□□□□□ -0.48
SPTBN1-203ENST00000389980 SCTRP47872 440 aa12.06□□□□□ -0.48
SPTBN1-203ENST00000389980 ACTN3Q08043 901 aaPredicted RBP12.06□□□□□ -0.48
SPTBN1-203ENST00000389980 GPRC6AQ5T6X5 926 aa12.06□□□□□ -0.48
SPTBN1-203ENST00000389980 HENMT1Q5T8I9 393 aaKnown RBP12.06□□□□□ -0.48
SPTBN1-203ENST00000389980 RPS27LQ71UM5 84 aaKnown RBP12.06□□□□□ -0.48
SPTBN1-203ENST00000389980 DSG4Q86SJ6 1040 aa12.06□□□□□ -0.48
SPTBN1-203ENST00000389980 AADATQ8N5Z0 425 aa12.06□□□□□ -0.48
SPTBN1-203ENST00000389980 OR6Y1Q8NGX8 325 aa12.06□□□□□ -0.48
SPTBN1-203ENST00000389980 RAB3IL1Q8TBN0 382 aa12.06□□□□□ -0.48
SPTBN1-203ENST00000389980 RDH11Q8TC12 318 aa12.06□□□□□ -0.48
SPTBN1-203ENST00000389980 KCNJ9Q92806 393 aa12.06□□□□□ -0.48
SPTBN1-203ENST00000389980 GRAMD1AQ96CP6 724 aa12.06□□□□□ -0.48
SPTBN1-203ENST00000389980 PHF21BQ96EK2 531 aa12.06□□□□□ -0.48
SPTBN1-203ENST00000389980 SORT1Q99523 831 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms