RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 TXNDC11Q6PKC3 985 aa24.97■■□□□ 1.59
SHOX2-201ENST00000389589 CPNE9Q8IYJ1 553 aa24.97■■□□□ 1.59
SHOX2-201ENST00000389589 NXPE1Q8N323 547 aa24.97■■□□□ 1.59
SHOX2-201ENST00000389589 PHTF2Q8N3S3 785 aa24.97■■□□□ 1.59
SHOX2-201ENST00000389589 CEP70Q8NHQ1 597 aa24.97■■□□□ 1.59
SHOX2-201ENST00000389589 PLEKHG4BQ96PX9 1271 aa24.97■■□□□ 1.59
SHOX2-201ENST00000389589 OSBPL1AQ9BXW6 950 aa24.97■■□□□ 1.59
SHOX2-201ENST00000389589 MEAF6Q9HAF1 191 aa24.97■■□□□ 1.59
SHOX2-201ENST00000389589 SARS2Q9NP81 518 aaKnown RBP24.97■■□□□ 1.59
SHOX2-201ENST00000389589 IKZF3Q9UKT9 509 aa24.97■■□□□ 1.59
SHOX2-201ENST00000389589 YBX2Q9Y2T7 364 aaKnown RBP24.97■■□□□ 1.59
SHOX2-201ENST00000389589 STX16-NPEPL1H3BU86 382 aa24.96■■□□□ 1.59
SHOX2-201ENST00000389589 SDHDO14521 159 aa24.96■■□□□ 1.59
SHOX2-201ENST00000389589 STX16O14662 325 aa24.96■■□□□ 1.59
SHOX2-201ENST00000389589 TRIM24O15164 1050 aa24.96■■□□□ 1.59
SHOX2-201ENST00000389589 KLK8O60259 260 aa24.96■■□□□ 1.59
SHOX2-201ENST00000389589 JUNP05412 331 aaKnown RBP24.96■■□□□ 1.59
SHOX2-201ENST00000389589 NFKBIAP25963 317 aa24.96■■□□□ 1.59
SHOX2-201ENST00000389589 PGM1P36871 562 aa24.96■■□□□ 1.59
SHOX2-201ENST00000389589 PTSQ03393 145 aa24.96■■□□□ 1.59
SHOX2-201ENST00000389589 RPS27LQ71UM5 84 aaKnown RBP24.96■■□□□ 1.59
SHOX2-201ENST00000389589 GPR26Q8NDV2 337 aa24.96■■□□□ 1.59
SHOX2-201ENST00000389589 PBXIP1Q96AQ6 731 aa24.96■■□□□ 1.59
SHOX2-201ENST00000389589 PRRC2BQ5JSZ5 2229 aaKnown RBP24.96■■□□□ 1.59
SHOX2-201ENST00000389589 INHBCP55103 352 aa24.95■■□□□ 1.59
SHOX2-201ENST00000389589 BTKQ06187 659 aa24.95■■□□□ 1.59
SHOX2-201ENST00000389589 ACTRT2Q8TDY3 377 aa24.95■■□□□ 1.59
SHOX2-201ENST00000389589 CYB5D2Q8WUJ1 264 aa24.95■■□□□ 1.59
SHOX2-201ENST00000389589 CIPCQ9C0C6 399 aa24.95■■□□□ 1.59
SHOX2-201ENST00000389589 SLC27A6Q9Y2P4 619 aa24.95■■□□□ 1.59
SHOX2-201ENST00000389589 UBFD1O14562 309 aaKnown RBP24.95■■□□□ 1.58
SHOX2-201ENST00000389589 CYP2A6P11509 494 aaPredicted RBP24.95■■□□□ 1.58
SHOX2-201ENST00000389589 UGT1A6P19224 532 aa24.95■■□□□ 1.58
SHOX2-201ENST00000389589 UGT1A1P22309 533 aa24.95■■□□□ 1.58
SHOX2-201ENST00000389589 UGT1A4P22310 534 aa24.95■■□□□ 1.58
SHOX2-201ENST00000389589 LHCGRP22888 699 aa24.95■■□□□ 1.58
SHOX2-201ENST00000389589 UGT1A3P35503 534 aa24.95■■□□□ 1.58
SHOX2-201ENST00000389589 UGT1A5P35504 534 aa24.95■■□□□ 1.58
SHOX2-201ENST00000389589 MACC1Q6ZN28 852 aa24.95■■□□□ 1.58
SHOX2-201ENST00000389589 GPSM1Q86YR5 675 aa24.95■■□□□ 1.58
SHOX2-201ENST00000389589 BPIFB1Q8TDL5 484 aa24.95■■□□□ 1.58
SHOX2-201ENST00000389589 RSPRY1Q96DX4 576 aa24.95■■□□□ 1.58
SHOX2-201ENST00000389589 LRIG1Q96JA1 1093 aa24.95■■□□□ 1.58
SHOX2-201ENST00000389589 C1QTNF3Q9BXJ4 246 aa24.95■■□□□ 1.58
SHOX2-201ENST00000389589 ZNF385DQ9H6B1 395 aa24.95■■□□□ 1.58
SHOX2-201ENST00000389589 CERS4Q9HA82 394 aa24.95■■□□□ 1.58
SHOX2-201ENST00000389589 B4GALT6Q9UBX8 382 aa24.95■■□□□ 1.58
SHOX2-201ENST00000389589 CHD9Q3L8U1 2897 aa24.94■■□□□ 1.58
SHOX2-201ENST00000389589 ANKRD12Q6UB98 2062 aa24.94■■□□□ 1.58
SHOX2-201ENST00000389589 IQCF5A8MTL0 148 aa24.94■■□□□ 1.58
SHOX2-201ENST00000389589 TTC34A8MYJ7 566 aa24.94■■□□□ 1.58
SHOX2-201ENST00000389589 SIX3O95343 332 aaPredicted RBP24.94■■□□□ 1.58
SHOX2-201ENST00000389589 FGF4P08620 206 aa24.94■■□□□ 1.58
SHOX2-201ENST00000389589 EZRP15311 586 aaKnown RBP24.94■■□□□ 1.58
SHOX2-201ENST00000389589 ZNF30P17039 623 aa24.94■■□□□ 1.58
SHOX2-201ENST00000389589 VIPR2P41587 438 aa24.94■■□□□ 1.58
SHOX2-201ENST00000389589 ANKS6Q68DC2 871 aa24.94■■□□□ 1.58
SHOX2-201ENST00000389589 NPAS3Q8IXF0 933 aa24.94■■□□□ 1.58
SHOX2-201ENST00000389589 CLYBLQ8N0X4 340 aa24.94■■□□□ 1.58
SHOX2-201ENST00000389589 FBXO27Q8NI29 283 aa24.94■■□□□ 1.58
SHOX2-201ENST00000389589 ULK4Q96C45 1275 aa24.94■■□□□ 1.58
SHOX2-201ENST00000389589 BOCQ9BWV1 1114 aa24.94■■□□□ 1.58
SHOX2-201ENST00000389589 DZANK1Q9NVP4 752 aa24.94■■□□□ 1.58
SHOX2-201ENST00000389589 PLA2G4CQ9UP65 541 aa24.94■■□□□ 1.58
SHOX2-201ENST00000389589 WASF2Q9Y6W5 498 aa24.94■■□□□ 1.58
SHOX2-201ENST00000389589 TSPAN11A1L157 253 aa24.93■■□□□ 1.58
SHOX2-201ENST00000389589 NFATC1O95644 943 aa24.93■■□□□ 1.58
SHOX2-201ENST00000389589 COX4I1P13073 169 aa24.93■■□□□ 1.58
SHOX2-201ENST00000389589 CCND1P24385 295 aa24.93■■□□□ 1.58
SHOX2-201ENST00000389589 EEF1DP29692 281 aaKnown RBP24.93■■□□□ 1.58
SHOX2-201ENST00000389589 CA5AP35218 305 aa24.93■■□□□ 1.58
SHOX2-201ENST00000389589 RGS4P49798 205 aa24.93■■□□□ 1.58
SHOX2-201ENST00000389589 POU5F2Q8N7G0 328 aa24.93■■□□□ 1.58
SHOX2-201ENST00000389589 SORCS1Q8WY21 1168 aa24.93■■□□□ 1.58
SHOX2-201ENST00000389589 SMARCD2Q92925 531 aa24.93■■□□□ 1.58
SHOX2-201ENST00000389589 TNFRSF12AQ9NP84 129 aa24.93■■□□□ 1.58
SHOX2-201ENST00000389589 FIS1Q9Y3D6 152 aa24.93■■□□□ 1.58
SHOX2-201ENST00000389589 SKAP2O75563 359 aaPredicted RBP24.93■■□□□ 1.58
SHOX2-201ENST00000389589 THRAP10827 490 aa24.93■■□□□ 1.58
SHOX2-201ENST00000389589 FSHRP23945 695 aa24.93■■□□□ 1.58
SHOX2-201ENST00000389589 CPOXP36551 454 aa24.93■■□□□ 1.58
SHOX2-201ENST00000389589 RAP1GDS1P52306 607 aa24.93■■□□□ 1.58
SHOX2-201ENST00000389589 ARHGEF7Q14155 803 aa24.93■■□□□ 1.58
SHOX2-201ENST00000389589 FAM78AQ5JUQ0 283 aa24.93■■□□□ 1.58
SHOX2-201ENST00000389589 TRIM68Q6AZZ1 485 aa24.93■■□□□ 1.58
SHOX2-201ENST00000389589 ASB16Q96NS5 453 aa24.93■■□□□ 1.58
SHOX2-201ENST00000389589 CDCA3Q99618 268 aaPredicted RBP24.93■■□□□ 1.58
SHOX2-201ENST00000389589 ZDHHC3Q9NYG2 299 aa24.93■■□□□ 1.58
SHOX2-201ENST00000389589 PKD2L2Q9NZM6 624 aa24.93■■□□□ 1.58
SHOX2-201ENST00000389589 CHUKO15111 745 aa24.92■■□□□ 1.58
SHOX2-201ENST00000389589 SNX2O60749 519 aa24.92■■□□□ 1.58
SHOX2-201ENST00000389589 C1SP09871 688 aa24.92■■□□□ 1.58
SHOX2-201ENST00000389589 NSG1P42857 185 aa24.92■■□□□ 1.58
SHOX2-201ENST00000389589 SPINT3P49223 89 aa24.92■■□□□ 1.58
SHOX2-201ENST00000389589 CDH13P55290 713 aa24.92■■□□□ 1.58
SHOX2-201ENST00000389589 SEMG2Q02383 582 aa24.92■■□□□ 1.58
SHOX2-201ENST00000389589 KCNC3Q14003 757 aa24.92■■□□□ 1.58
SHOX2-201ENST00000389589 CRY1Q16526 586 aa24.92■■□□□ 1.58
SHOX2-201ENST00000389589 ADAMTSL2Q86TH1 951 aa24.92■■□□□ 1.58
SHOX2-201ENST00000389589 HCAR2Q8TDS4 363 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms