RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 CDK18Q07002 472 aa16.64■□□□□ 0.25
SMN2-201ENST00000380741 PDK1Q15118 436 aa16.64■□□□□ 0.25
SMN2-201ENST00000380741 PLA2G4EQ3MJ16 856 aa16.64■□□□□ 0.25
SMN2-201ENST00000380741 BORAQ6PGQ7 559 aa16.64■□□□□ 0.25
SMN2-201ENST00000380741 CRTC3Q6UUV7 619 aa16.64■□□□□ 0.25
SMN2-201ENST00000380741 CEACAM20Q6UY09 585 aa16.64■□□□□ 0.25
SMN2-201ENST00000380741 B4GALNT4Q76KP1 1039 aa16.64■□□□□ 0.25
SMN2-201ENST00000380741 TMC3Q7Z5M5 1100 aa16.64■□□□□ 0.25
SMN2-201ENST00000380741 ADGRG6Q86SQ4 1221 aa16.64■□□□□ 0.25
SMN2-201ENST00000380741 TRAM1L1Q8N609 369 aa16.64■□□□□ 0.25
SMN2-201ENST00000380741 GLYATL1Q969I3 302 aa16.64■□□□□ 0.25
SMN2-201ENST00000380741 TADA1Q96BN2 335 aa16.64■□□□□ 0.25
SMN2-201ENST00000380741 PLEKHG4BQ96PX9 1271 aa16.64■□□□□ 0.25
SMN2-201ENST00000380741 MAK16Q9BXY0 300 aaKnown RBP16.64■□□□□ 0.25
SMN2-201ENST00000380741 SPRY4Q9C004 299 aa16.64■□□□□ 0.25
SMN2-201ENST00000380741 SLC25A51Q9H1U9 297 aa16.64■□□□□ 0.25
SMN2-201ENST00000380741 OSGEPL1Q9H4B0 414 aa16.64■□□□□ 0.25
SMN2-201ENST00000380741 MAGEE1Q9HCI5 957 aa16.64■□□□□ 0.25
SMN2-201ENST00000380741 TRIM39Q9HCM9 518 aa16.64■□□□□ 0.25
SMN2-201ENST00000380741 APMAPQ9HDC9 416 aa16.64■□□□□ 0.25
SMN2-201ENST00000380741 FBXO8Q9NRD0 319 aa16.64■□□□□ 0.25
SMN2-201ENST00000380741 GEMIN8Q9NWZ8 242 aaKnown RBP16.64■□□□□ 0.25
SMN2-201ENST00000380741 SCHIP1Q9P0W5 487 aaPredicted RBP16.64■□□□□ 0.25
SMN2-201ENST00000380741 NFKBIL1Q9UBC1 381 aaPredicted RBP16.64■□□□□ 0.25
SMN2-201ENST00000380741 LILRA5A6NI73 299 aa16.63■□□□□ 0.25
SMN2-201ENST00000380741 GPR89AB7ZAQ6 455 aa16.63■□□□□ 0.25
SMN2-201ENST00000380741 TERTO14746 1132 aaKnown RBP16.63■□□□□ 0.25
SMN2-201ENST00000380741 PPP1R12AO14974 1030 aaPredicted RBP16.63■□□□□ 0.25
SMN2-201ENST00000380741 CHUKO15111 745 aa16.63■□□□□ 0.25
SMN2-201ENST00000380741 SUV39H1O43463 412 aa16.63■□□□□ 0.25
SMN2-201ENST00000380741 PPFIA2O75334 1257 aa16.63■□□□□ 0.25
SMN2-201ENST00000380741 MTA2O94776 668 aa16.63■□□□□ 0.25
SMN2-201ENST00000380741 MT-CYBP00156 380 aaPredicted RBP16.63■□□□□ 0.25
SMN2-201ENST00000380741 KRT1P04264 644 aa16.63■□□□□ 0.25
SMN2-201ENST00000380741 GPR89BP0CG08 455 aa16.63■□□□□ 0.25
SMN2-201ENST00000380741 ARHGAP25P42331 645 aa16.63■□□□□ 0.25
SMN2-201ENST00000380741 DYNLT1P63172 113 aa16.63■□□□□ 0.25
SMN2-201ENST00000380741 PDPK2PQ6A1A2 396 aa16.63■□□□□ 0.25
SMN2-201ENST00000380741 ATG14Q6ZNE5 492 aa16.63■□□□□ 0.25
SMN2-201ENST00000380741 RFX6Q8HWS3 928 aa16.63■□□□□ 0.25
SMN2-201ENST00000380741 NLGN4XQ8N0W4 816 aa16.63■□□□□ 0.25
SMN2-201ENST00000380741 AVL9Q8NBF6 648 aa16.63■□□□□ 0.25
SMN2-201ENST00000380741 NLGN4YQ8NFZ3 816 aaPredicted RBP16.63■□□□□ 0.25
SMN2-201ENST00000380741 SPATA22Q8NHS9 363 aa16.63■□□□□ 0.25
SMN2-201ENST00000380741 GPR63Q9BZJ6 419 aa16.63■□□□□ 0.25
SMN2-201ENST00000380741 SLC25A18Q9H1K4 315 aa16.63■□□□□ 0.25
SMN2-201ENST00000380741 EPB41L1Q9H4G0 881 aa16.63■□□□□ 0.25
SMN2-201ENST00000380741 RAD18Q9NS91 495 aa16.63■□□□□ 0.25
SMN2-201ENST00000380741 SPTLC3Q9NUV7 552 aa16.63■□□□□ 0.25
SMN2-201ENST00000380741 SLC23A2Q9UGH3 650 aa16.63■□□□□ 0.25
SMN2-201ENST00000380741 MN1Q10571 1320 aaPredicted RBP16.63■□□□□ 0.25
SMN2-201ENST00000380741 HECTD1Q9ULT8 2610 aa16.63■□□□□ 0.25
SMN2-201ENST00000380741 ZNF891A8MT65 544 aaPredicted RBP16.62■□□□□ 0.25
SMN2-201ENST00000380741 MTX2O75431 263 aa16.62■□□□□ 0.25
SMN2-201ENST00000380741 ZFXP17010 805 aaPredicted RBP16.62■□□□□ 0.25
SMN2-201ENST00000380741 BPIP17213 487 aa16.62■□□□□ 0.25
SMN2-201ENST00000380741 NOP2P46087 812 aaKnown RBP16.62■□□□□ 0.25
SMN2-201ENST00000380741 CSRP3P50461 194 aa16.62■□□□□ 0.25
SMN2-201ENST00000380741 GFERP55789 205 aa16.62■□□□□ 0.25
SMN2-201ENST00000380741 TRIM14Q14142 442 aa16.62■□□□□ 0.25
SMN2-201ENST00000380741 SLC14A2Q15849 920 aa16.62■□□□□ 0.25
SMN2-201ENST00000380741 INSCQ1MX18 579 aa16.62■□□□□ 0.25
SMN2-201ENST00000380741 TIPARPQ7Z3E1 657 aaKnown RBP16.62■□□□□ 0.25
SMN2-201ENST00000380741 PLXDC1Q8IUK5 500 aa16.62■□□□□ 0.25
SMN2-201ENST00000380741 RNF25Q96BH1 459 aaPredicted RBP16.62■□□□□ 0.25
SMN2-201ENST00000380741 SLC45A3Q96JT2 553 aa16.62■□□□□ 0.25
SMN2-201ENST00000380741 CHP1Q99653 195 aa16.62■□□□□ 0.25
SMN2-201ENST00000380741 ZPBPQ9BS86 351 aa16.62■□□□□ 0.25
SMN2-201ENST00000380741 ADNPQ9H2P0 1102 aa16.62■□□□□ 0.25
SMN2-201ENST00000380741 GPN2Q9H9Y4 310 aaPredicted RBP16.62■□□□□ 0.25
SMN2-201ENST00000380741 GLOD4Q9HC38 313 aa16.62■□□□□ 0.25
SMN2-201ENST00000380741 ABHD10Q9NUJ1 306 aa16.62■□□□□ 0.25
SMN2-201ENST00000380741 ZNHIT6Q9NWK9 470 aaKnown RBP16.62■□□□□ 0.25
SMN2-201ENST00000380741 OGFRQ9NZT2 677 aa16.62■□□□□ 0.25
SMN2-201ENST00000380741 DNAJC16Q9Y2G8 782 aa16.62■□□□□ 0.25
SMN2-201ENST00000380741 SPO11Q9Y5K1 396 aa16.62■□□□□ 0.25
SMN2-201ENST00000380741 COL12A1Q99715 3063 aa16.61■□□□□ 0.25
SMN2-201ENST00000380741 SPENQ96T58 3664 aaKnown RBP16.61■□□□□ 0.25
SMN2-201ENST00000380741 LOC101059948A0A1B0GTJ6 334 aa16.61■□□□□ 0.25
SMN2-201ENST00000380741 AURKAO14965 403 aa16.61■□□□□ 0.25
SMN2-201ENST00000380741 POLR1CO15160 346 aaPredicted RBP16.61■□□□□ 0.25
SMN2-201ENST00000380741 KMOO15229 486 aa16.61■□□□□ 0.25
SMN2-201ENST00000380741 CAPN5O15484 640 aaPredicted RBP16.61■□□□□ 0.25
SMN2-201ENST00000380741 NKX2-8O15522 239 aa16.61■□□□□ 0.25
SMN2-201ENST00000380741 PMPCBO75439 489 aa16.61■□□□□ 0.25
SMN2-201ENST00000380741 STK17BO94768 372 aa16.61■□□□□ 0.25
SMN2-201ENST00000380741 ANKRD34CP0C6C1 535 aa16.61■□□□□ 0.25
SMN2-201ENST00000380741 TNNT1P13805 278 aa16.61■□□□□ 0.25
SMN2-201ENST00000380741 ZNF7P17097 686 aaPredicted RBP16.61■□□□□ 0.25
SMN2-201ENST00000380741 XRCC1P18887 633 aaPredicted RBP16.61■□□□□ 0.25
SMN2-201ENST00000380741 PTPN3P26045 913 aa16.61■□□□□ 0.25
SMN2-201ENST00000380741 MAP4P27816 1152 aaKnown RBP16.61■□□□□ 0.25
SMN2-201ENST00000380741 POLE2P56282 527 aa16.61■□□□□ 0.25
SMN2-201ENST00000380741 SEPT7Q16181 437 aaKnown RBP16.61■□□□□ 0.25
SMN2-201ENST00000380741 KHDC1Q4VXA5 237 aaKnown RBP16.61■□□□□ 0.25
SMN2-201ENST00000380741 TEX44Q53QW1 395 aa16.61■□□□□ 0.25
SMN2-201ENST00000380741 LRRC38Q5VT99 294 aa16.61■□□□□ 0.25
SMN2-201ENST00000380741 TMEM26Q6ZUK4 368 aa16.61■□□□□ 0.25
SMN2-201ENST00000380741 LRRTM4Q86VH4 590 aa16.61■□□□□ 0.25
SMN2-201ENST00000380741 ZNF547Q8IVP9 402 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms