RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 DLGAP2Q9P1A6 1054 aa12.52□□□□□ -0.41
VPS16-202ENST00000380445 CFAP97Q9P2B7 532 aa12.52□□□□□ -0.41
VPS16-202ENST00000380445 NPEPPSL1A6NEC2 478 aa12.51□□□□□ -0.41
VPS16-202ENST00000380445 CDC7O00311 574 aa12.51□□□□□ -0.41
VPS16-202ENST00000380445 FGF18O76093 207 aa12.51□□□□□ -0.41
VPS16-202ENST00000380445 CNPP09543 421 aaKnown RBP12.51□□□□□ -0.41
VPS16-202ENST00000380445 CSF2RAP15509 400 aa12.51□□□□□ -0.41
VPS16-202ENST00000380445 RAG1P15918 1043 aa12.51□□□□□ -0.41
VPS16-202ENST00000380445 CYP4F8P98187 520 aa12.51□□□□□ -0.41
VPS16-202ENST00000380445 LYSMD3Q7Z3D4 306 aa12.51□□□□□ -0.41
VPS16-202ENST00000380445 GPSM1Q86YR5 675 aa12.51□□□□□ -0.41
VPS16-202ENST00000380445 SIDT2Q8NBJ9 832 aaKnown RBP12.51□□□□□ -0.41
VPS16-202ENST00000380445 PCYOX1LQ8NBM8 494 aa12.51□□□□□ -0.41
VPS16-202ENST00000380445 BHMTQ93088 406 aa12.51□□□□□ -0.41
VPS16-202ENST00000380445 LINGO1Q96FE5 620 aa12.51□□□□□ -0.41
VPS16-202ENST00000380445 PDLIM5Q96HC4 596 aaKnown RBP12.51□□□□□ -0.41
VPS16-202ENST00000380445 NUSAP1Q9BXS6 441 aaKnown RBP12.51□□□□□ -0.41
VPS16-202ENST00000380445 P2RY12Q9H244 342 aa12.51□□□□□ -0.41
VPS16-202ENST00000380445 ATP13A3Q9H7F0 1226 aa12.51□□□□□ -0.41
VPS16-202ENST00000380445 ABCB8Q9NUT2 735 aa12.51□□□□□ -0.41
VPS16-202ENST00000380445 PSMD13Q9UNM6 376 aa12.51□□□□□ -0.41
VPS16-202ENST00000380445 A0A0J9YYE9 177 aa12.51□□□□□ -0.41
VPS16-202ENST00000380445 ATP6AP2A0A1C7CYW4 349 aa12.51□□□□□ -0.41
VPS16-202ENST00000380445 BBIP1A8MTZ0 92 aa12.51□□□□□ -0.41
VPS16-202ENST00000380445 TRIM38O00635 465 aa12.51□□□□□ -0.41
VPS16-202ENST00000380445 HTRA2O43464 458 aaPredicted RBP12.51□□□□□ -0.41
VPS16-202ENST00000380445 NRP2O60462 931 aa12.51□□□□□ -0.41
VPS16-202ENST00000380445 ATP6AP2O75787 350 aa12.51□□□□□ -0.41
VPS16-202ENST00000380445 TRBC1P01850 177 aa12.51□□□□□ -0.41
VPS16-202ENST00000380445 ADH1AP07327 375 aa12.51□□□□□ -0.41
VPS16-202ENST00000380445 CTPS1P17812 591 aa12.51□□□□□ -0.41
VPS16-202ENST00000380445 PSMD8P48556 350 aa12.51□□□□□ -0.41
VPS16-202ENST00000380445 PSME3P61289 254 aa12.51□□□□□ -0.41
VPS16-202ENST00000380445 KIF19Q2TAC6 998 aa12.51□□□□□ -0.41
VPS16-202ENST00000380445 HACD2Q6Y1H2 254 aa12.51□□□□□ -0.41
VPS16-202ENST00000380445 CYHR1Q6ZMK1 362 aa12.51□□□□□ -0.41
VPS16-202ENST00000380445 CAMK1DQ8IU85 385 aa12.51□□□□□ -0.41
VPS16-202ENST00000380445 DDIASQ8IXT1 998 aa12.51□□□□□ -0.41
VPS16-202ENST00000380445 OR56A4Q8NGH8 313 aa12.51□□□□□ -0.41
VPS16-202ENST00000380445 MIPOL1Q8TD10 442 aa12.51□□□□□ -0.41
VPS16-202ENST00000380445 EEF1AKMT1Q8WVE0 214 aa12.51□□□□□ -0.41
VPS16-202ENST00000380445 CCT7Q99832 543 aa12.51□□□□□ -0.41
VPS16-202ENST00000380445 KLHL4Q9C0H6 718 aa12.51□□□□□ -0.41
VPS16-202ENST00000380445 CLPBQ9H078 707 aa12.51□□□□□ -0.41
VPS16-202ENST00000380445 CACNA2D2Q9NY47 1150 aa12.51□□□□□ -0.41
VPS16-202ENST00000380445 EVLQ9UI08 416 aaPredicted RBP12.51□□□□□ -0.41
VPS16-202ENST00000380445 SARDHQ9UL12 918 aa12.51□□□□□ -0.41
VPS16-202ENST00000380445 DHRS7Q9Y394 339 aa12.51□□□□□ -0.41
VPS16-202ENST00000380445 K7ERQ8 282 aa12.5□□□□□ -0.41
VPS16-202ENST00000380445 PIP5K1BO14986 540 aa12.5□□□□□ -0.41
VPS16-202ENST00000380445 TSPAN12O95859 305 aa12.5□□□□□ -0.41
VPS16-202ENST00000380445 LBPP18428 481 aa12.5□□□□□ -0.41
VPS16-202ENST00000380445 PKNOX1P55347 436 aa12.5□□□□□ -0.41
VPS16-202ENST00000380445 CEACAM7Q14002 265 aa12.5□□□□□ -0.41
VPS16-202ENST00000380445 LRP8Q14114 963 aa12.5□□□□□ -0.41
VPS16-202ENST00000380445 MYBPC3Q14896 1274 aa12.5□□□□□ -0.41
VPS16-202ENST00000380445 REP15Q6BDI9 236 aa12.5□□□□□ -0.41
VPS16-202ENST00000380445 TMEM126BQ8IUX1 230 aa12.5□□□□□ -0.41
VPS16-202ENST00000380445 BBS7Q8IWZ6 715 aa12.5□□□□□ -0.41
VPS16-202ENST00000380445 TMEM199Q8N511 208 aa12.5□□□□□ -0.41
VPS16-202ENST00000380445 FIBCD1Q8N539 461 aa12.5□□□□□ -0.41
VPS16-202ENST00000380445 DIS3LQ8TF46 1054 aaKnown RBP12.5□□□□□ -0.41
VPS16-202ENST00000380445 C3orf30Q96M34 536 aa12.5□□□□□ -0.41
VPS16-202ENST00000380445 NSUN5Q96P11 429 aaKnown RBP12.5□□□□□ -0.41
VPS16-202ENST00000380445 YIPF2Q9BWQ6 316 aa12.5□□□□□ -0.41
VPS16-202ENST00000380445 ADA2Q9NZK5 511 aa12.5□□□□□ -0.41
VPS16-202ENST00000380445 CD274Q9NZQ7 290 aa12.5□□□□□ -0.41
VPS16-202ENST00000380445 GALPQ9UBC7 116 aa12.5□□□□□ -0.41
VPS16-202ENST00000380445 C1orf232A0A0U1RR37 186 aa12.5□□□□□ -0.41
VPS16-202ENST00000380445 LRRC14BA6NHZ5 514 aa12.5□□□□□ -0.41
VPS16-202ENST00000380445 OBSL1O75147 1896 aa12.5□□□□□ -0.41
VPS16-202ENST00000380445 BCAS2O75934 225 aaPredicted RBP12.5□□□□□ -0.41
VPS16-202ENST00000380445 XRCC1P18887 633 aaPredicted RBP12.5□□□□□ -0.41
VPS16-202ENST00000380445 ITGALP20701 1170 aa12.5□□□□□ -0.41
VPS16-202ENST00000380445 RPS3P23396 243 aaKnown RBP eCLIP12.5□□□□□ -0.41
VPS16-202ENST00000380445 SERPINA4P29622 427 aa12.5□□□□□ -0.41
VPS16-202ENST00000380445 MAGEA10P43363 369 aaPredicted RBP12.5□□□□□ -0.41
VPS16-202ENST00000380445 LMAN2Q12907 356 aa12.5□□□□□ -0.41
VPS16-202ENST00000380445 PLEKHG6Q3KR16 790 aa12.5□□□□□ -0.41
VPS16-202ENST00000380445 PTRHD1Q6GMV3 140 aaKnown RBP12.5□□□□□ -0.41
VPS16-202ENST00000380445 SNX20Q7Z614 316 aa12.5□□□□□ -0.41
VPS16-202ENST00000380445 TMC8Q8IU68 726 aa12.5□□□□□ -0.41
VPS16-202ENST00000380445 CPNE9Q8IYJ1 553 aa12.5□□□□□ -0.41
VPS16-202ENST00000380445 RBFAQ8N0V3 343 aa12.5□□□□□ -0.41
VPS16-202ENST00000380445 ROPN1LQ96C74 230 aa12.5□□□□□ -0.41
VPS16-202ENST00000380445 TUBGCP3Q96CW5 907 aa12.5□□□□□ -0.41
VPS16-202ENST00000380445 NR1H4Q96RI1 486 aaPredicted RBP12.5□□□□□ -0.41
VPS16-202ENST00000380445 SLC30A3Q99726 388 aa12.5□□□□□ -0.41
VPS16-202ENST00000380445 SARS2Q9NP81 518 aaKnown RBP12.5□□□□□ -0.41
VPS16-202ENST00000380445 SPAG4Q9NPE6 437 aa12.5□□□□□ -0.41
VPS16-202ENST00000380445 SEMA4BQ9NPR2 832 aaPredicted RBP12.5□□□□□ -0.41
VPS16-202ENST00000380445 NUDT4Q9NZJ9 180 aa12.5□□□□□ -0.41
VPS16-202ENST00000380445 SUCOQ9UBS9 1254 aaKnown RBP12.5□□□□□ -0.41
VPS16-202ENST00000380445 SCOCQ9UIL1 159 aa12.5□□□□□ -0.41
VPS16-202ENST00000380445 GNPTGQ9UJJ9 305 aa12.5□□□□□ -0.41
VPS16-202ENST00000380445 PCDHGA7Q9Y5G6 932 aa12.5□□□□□ -0.41
VPS16-202ENST00000380445 MAGEA13PA6NCF6 341 aa12.49□□□□□ -0.41
VPS16-202ENST00000380445 MRASO14807 208 aa12.49□□□□□ -0.41
VPS16-202ENST00000380445 CASQ2O14958 399 aaPredicted RBP12.49□□□□□ -0.41
VPS16-202ENST00000380445 SMAD6O43541 496 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms