RNA–Protein interactions for RNA: ENST00000378536.4

SKI-201, Transcript of SKI proto-oncogene, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKI, Length 5,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-201ENST00000378536 DNAJB14Q8TBM8 379 aa21.04■□□□□ 0.96
SKI-201ENST00000378536 ZNF840PA6NDX5 716 aa21.04■□□□□ 0.96
SKI-201ENST00000378536 SLC22A3O75751 556 aa21.04■□□□□ 0.96
SKI-201ENST00000378536 PIK3R1P27986 724 aa21.04■□□□□ 0.96
SKI-201ENST00000378536 BMPR1AP36894 532 aa21.04■□□□□ 0.96
SKI-201ENST00000378536 PRKD1Q15139 912 aaPredicted RBP21.04■□□□□ 0.96
SKI-201ENST00000378536 CAPRIN2Q6IMN6 1127 aaKnown RBP21.04■□□□□ 0.96
SKI-201ENST00000378536 C2orf73Q8N5S3 287 aaPredicted RBP21.04■□□□□ 0.96
SKI-201ENST00000378536 GLIS1Q8NBF1 620 aa21.04■□□□□ 0.96
SKI-201ENST00000378536 MCCC1Q96RQ3 725 aaPredicted RBP21.04■□□□□ 0.96
SKI-201ENST00000378536 ZIC5Q96T25 663 aa21.04■□□□□ 0.96
SKI-201ENST00000378536 PRRG3Q9BZD7 231 aa21.04■□□□□ 0.96
SKI-201ENST00000378536 OR51F1A6NGY5 319 aa21.03■□□□□ 0.96
SKI-201ENST00000378536 LCP2Q13094 533 aa21.03■□□□□ 0.96
SKI-201ENST00000378536 C22orf39Q6P5X5 142 aa21.03■□□□□ 0.96
SKI-201ENST00000378536 LYSMD3Q7Z3D4 306 aa21.03■□□□□ 0.96
SKI-201ENST00000378536 DLG3Q92796 817 aa21.03■□□□□ 0.96
SKI-201ENST00000378536 SFXN1Q9H9B4 322 aa21.03■□□□□ 0.96
SKI-201ENST00000378536 KRT84Q9NSB2 600 aa21.03■□□□□ 0.96
SKI-201ENST00000378536 ALFQ53S48 1182 aa21.03■□□□□ 0.96
SKI-201ENST00000378536 FSTL5Q8N475 847 aaPredicted RBP21.03■□□□□ 0.96
SKI-201ENST00000378536 BANPQ8N9N5 519 aa21.03■□□□□ 0.96
SKI-201ENST00000378536 BHLHE22Q8NFJ8 381 aaPredicted RBP21.03■□□□□ 0.96
SKI-201ENST00000378536 CDKN2AIPNLQ96HQ2 116 aa21.03■□□□□ 0.96
SKI-201ENST00000378536 EBF3Q9H4W6 596 aa21.03■□□□□ 0.96
SKI-201ENST00000378536 VPS4AQ9UN37 437 aa21.03■□□□□ 0.96
SKI-201ENST00000378536 PITX1P78337 314 aaPredicted RBP21.03■□□□□ 0.96
SKI-201ENST00000378536 PLEKHG4Q58EX7 1191 aa21.03■□□□□ 0.96
SKI-201ENST00000378536 CHST15Q7LFX5 561 aaPredicted RBP21.03■□□□□ 0.96
SKI-201ENST00000378536 TAF8Q7Z7C8 310 aa21.03■□□□□ 0.96
SKI-201ENST00000378536 BCORQ6W2J9 1755 aa21.03■□□□□ 0.96
SKI-201ENST00000378536 TK2O00142 265 aa21.03■□□□□ 0.96
SKI-201ENST00000378536 UGT1A9O60656 530 aa21.03■□□□□ 0.96
SKI-201ENST00000378536 ADAMTS4O75173 837 aa21.03■□□□□ 0.96
SKI-201ENST00000378536 ZNHIT3Q15649 155 aaPredicted RBP21.03■□□□□ 0.96
SKI-201ENST00000378536 PITRM1Q5JRX3 1037 aa21.03■□□□□ 0.96
SKI-201ENST00000378536 TMCO2Q7Z6W1 182 aaPredicted RBP21.03■□□□□ 0.96
SKI-201ENST00000378536 OR2AG1Q9H205 316 aa21.03■□□□□ 0.96
SKI-201ENST00000378536 UGT1A7Q9HAW7 530 aa21.03■□□□□ 0.96
SKI-201ENST00000378536 UGT1A10Q9HAW8 530 aa21.03■□□□□ 0.96
SKI-201ENST00000378536 UGT1A8Q9HAW9 530 aa21.03■□□□□ 0.96
SKI-201ENST00000378536 ACSS2Q9NR19 701 aa21.03■□□□□ 0.96
SKI-201ENST00000378536 ANKRD66B4E2M5 251 aa21.03■□□□□ 0.96
SKI-201ENST00000378536 LRATO95237 230 aa21.03■□□□□ 0.96
SKI-201ENST00000378536 CAPZA2P47755 286 aa21.03■□□□□ 0.96
SKI-201ENST00000378536 CCNHP51946 323 aaPredicted RBP21.03■□□□□ 0.96
SKI-201ENST00000378536 GTF2H2Q13888 395 aa21.03■□□□□ 0.96
SKI-201ENST00000378536 TSNQ15631 228 aaKnown RBP21.03■□□□□ 0.96
SKI-201ENST00000378536 GTF2H2CQ6P1K8 395 aa21.03■□□□□ 0.96
SKI-201ENST00000378536 TWIST2Q8WVJ9 160 aa21.03■□□□□ 0.96
SKI-201ENST00000378536 IRF7Q92985 503 aa21.03■□□□□ 0.96
SKI-201ENST00000378536 WDR55Q9H6Y2 383 aaPredicted RBP21.03■□□□□ 0.96
SKI-201ENST00000378536 CCDC177Q9NQR7 707 aaPredicted RBP21.03■□□□□ 0.96
SKI-201ENST00000378536 KAT6AQ92794 2004 aa21.02■□□□□ 0.96
SKI-201ENST00000378536 FAM72CH0Y354 149 aa21.02■□□□□ 0.96
SKI-201ENST00000378536 GNPDA1P46926 289 aa21.02■□□□□ 0.96
SKI-201ENST00000378536 PWP1Q13610 501 aa21.02■□□□□ 0.96
SKI-201ENST00000378536 CCDC142Q17RM4 750 aa21.02■□□□□ 0.96
SKI-201ENST00000378536 ARL13AQ5H913 290 aaPredicted RBP21.02■□□□□ 0.96
SKI-201ENST00000378536 FAM72AQ5TYM5 149 aa21.02■□□□□ 0.96
SKI-201ENST00000378536 ANXA8L1Q5VT79 327 aa21.02■□□□□ 0.96
SKI-201ENST00000378536 FAM72DQ6L9T8 149 aa21.02■□□□□ 0.96
SKI-201ENST00000378536 C16orf87Q6PH81 154 aa21.02■□□□□ 0.96
SKI-201ENST00000378536 FAM72BQ86X60 149 aa21.02■□□□□ 0.96
SKI-201ENST00000378536 ZNF514Q96K75 400 aaPredicted RBP21.02■□□□□ 0.96
SKI-201ENST00000378536 TRBV23OR9-2A0A075B6M9 112 aa21.02■□□□□ 0.96
SKI-201ENST00000378536 AADATQ8N5Z0 425 aa21.02■□□□□ 0.96
SKI-201ENST00000378536 RETREG1Q9H6L5 497 aa21.02■□□□□ 0.96
SKI-201ENST00000378536 KRT75O95678 551 aa21.02■□□□□ 0.96
SKI-201ENST00000378536 VIPR1P32241 457 aa21.02■□□□□ 0.96
SKI-201ENST00000378536 MRPS35P82673 323 aaKnown RBP21.02■□□□□ 0.96
SKI-201ENST00000378536 KPNB1Q14974 876 aaKnown RBP21.02■□□□□ 0.96
SKI-201ENST00000378536 ZNF783Q6ZMS7 281 aa21.02■□□□□ 0.96
SKI-201ENST00000378536 ZNF366Q8N895 744 aa21.02■□□□□ 0.96
SKI-201ENST00000378536 GDPD5Q8WTR4 605 aa21.02■□□□□ 0.96
SKI-201ENST00000378536 KLK6Q92876 244 aa21.02■□□□□ 0.96
SKI-201ENST00000378536 ITCHQ96J02 903 aa21.02■□□□□ 0.96
SKI-201ENST00000378536 PANX1Q96RD7 426 aa21.02■□□□□ 0.96
SKI-201ENST00000378536 BATF3Q9NR55 127 aa21.02■□□□□ 0.96
SKI-201ENST00000378536 DNAJC28Q9NX36 388 aa21.02■□□□□ 0.96
SKI-201ENST00000378536 N4BP2Q86UW6 1770 aaPredicted RBP21.02■□□□□ 0.96
SKI-201ENST00000378536 A0A0D9SEW6 157 aa21.02■□□□□ 0.95
SKI-201ENST00000378536 RCN3Q96D15 328 aa21.02■□□□□ 0.95
SKI-201ENST00000378536 PSMD13Q9UNM6 376 aa21.02■□□□□ 0.95
SKI-201ENST00000378536 OR10H2O60403 315 aa21.01■□□□□ 0.95
SKI-201ENST00000378536 TCEA3O75764 348 aa21.01■□□□□ 0.95
SKI-201ENST00000378536 RECQL5O94762 991 aaPredicted RBP21.01■□□□□ 0.95
SKI-201ENST00000378536 CCDC81Q6ZN84 652 aa21.01■□□□□ 0.95
SKI-201ENST00000378536 GCNT7Q6ZNI0 430 aa21.01■□□□□ 0.95
SKI-201ENST00000378536 PLD3Q8IV08 490 aa21.01■□□□□ 0.95
SKI-201ENST00000378536 OR52E6Q96RD3 313 aa21.01■□□□□ 0.95
SKI-201ENST00000378536 ZDHHC3Q9NYG2 299 aa21.01■□□□□ 0.95
SKI-201ENST00000378536 ANAPC2Q9UJX6 822 aa21.01■□□□□ 0.95
SKI-201ENST00000378536 MYH11P35749 1972 aa21.01■□□□□ 0.95
SKI-201ENST00000378536 ITGB1P05556 798 aa21.01■□□□□ 0.95
SKI-201ENST00000378536 VAV1P15498 845 aa21.01■□□□□ 0.95
SKI-201ENST00000378536 RAB33AQ14088 237 aa21.01■□□□□ 0.95
SKI-201ENST00000378536 TRIM69Q86WT6 500 aa21.01■□□□□ 0.95
SKI-201ENST00000378536 TSTD1Q8NFU3 115 aa21.01■□□□□ 0.95
SKI-201ENST00000378536 RIOK2Q9BVS4 552 aaKnown RBP21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms