RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 FBXO48Q5FWF7 155 aa14.94□□□□□ -0.02
NPHP4-201ENST00000378156 MTX3Q5HYI7 312 aa14.94□□□□□ -0.02
NPHP4-201ENST00000378156 UBE2R2Q712K3 238 aaPredicted RBP14.94□□□□□ -0.02
NPHP4-201ENST00000378156 GPR180Q86V85 440 aa14.94□□□□□ -0.02
NPHP4-201ENST00000378156 PLD4Q96BZ4 506 aa14.94□□□□□ -0.02
NPHP4-201ENST00000378156 SUSD3Q96L08 255 aa14.94□□□□□ -0.02
NPHP4-201ENST00000378156 TIMMDC1Q9NPL8 285 aa14.94□□□□□ -0.02
NPHP4-201ENST00000378156 EIF2B3Q9NR50 452 aaKnown RBP14.94□□□□□ -0.02
NPHP4-201ENST00000378156 TBX10O75333 385 aa14.93□□□□□ -0.02
NPHP4-201ENST00000378156 IDO1P14902 403 aa14.93□□□□□ -0.02
NPHP4-201ENST00000378156 HNF4AP41235 474 aa14.93□□□□□ -0.02
NPHP4-201ENST00000378156 CRATP43155 626 aa14.93□□□□□ -0.02
NPHP4-201ENST00000378156 PRKAG1P54619 331 aa14.93□□□□□ -0.02
NPHP4-201ENST00000378156 AP1S1P61966 158 aa14.93□□□□□ -0.02
NPHP4-201ENST00000378156 TRAP1Q12931 704 aaKnown RBP14.93□□□□□ -0.02
NPHP4-201ENST00000378156 SIX1Q15475 284 aaPredicted RBP14.93□□□□□ -0.02
NPHP4-201ENST00000378156 UBAP2Q5T6F2 1119 aaKnown RBP14.93□□□□□ -0.02
NPHP4-201ENST00000378156 CLP1Q92989 425 aaKnown RBP14.93□□□□□ -0.02
NPHP4-201ENST00000378156 REEP1Q9H902 201 aa14.93□□□□□ -0.02
NPHP4-201ENST00000378156 CLK4Q9HAZ1 481 aaKnown RBP14.93□□□□□ -0.02
NPHP4-201ENST00000378156 KCTD5Q9NXV2 234 aa14.93□□□□□ -0.02
NPHP4-201ENST00000378156 MRPL39Q9NYK5 338 aaKnown RBP14.93□□□□□ -0.02
NPHP4-201ENST00000378156 EHD3Q9NZN3 535 aa14.93□□□□□ -0.02
NPHP4-201ENST00000378156 SLC7A8Q9UHI5 535 aa14.93□□□□□ -0.02
NPHP4-201ENST00000378156 A0A0J9YYE9 177 aa14.93□□□□□ -0.02
NPHP4-201ENST00000378156 CHRNGP07510 517 aa14.93□□□□□ -0.02
NPHP4-201ENST00000378156 TSPAN19P0C672 248 aa14.93□□□□□ -0.02
NPHP4-201ENST00000378156 PTPN2P17706 415 aa14.93□□□□□ -0.02
NPHP4-201ENST00000378156 AMD1P17707 334 aa14.93□□□□□ -0.02
NPHP4-201ENST00000378156 IRF9Q00978 393 aa14.93□□□□□ -0.02
NPHP4-201ENST00000378156 TSTD2Q5T7W7 516 aa14.93□□□□□ -0.02
NPHP4-201ENST00000378156 PAGE2Q7Z2X7 111 aa14.93□□□□□ -0.02
NPHP4-201ENST00000378156 MYOCQ99972 504 aa14.93□□□□□ -0.02
NPHP4-201ENST00000378156 C9JVG2 144 aa14.93□□□□□ -0.02
NPHP4-201ENST00000378156 DNTTP04053 509 aa14.93□□□□□ -0.02
NPHP4-201ENST00000378156 PAICSP22234 425 aaKnown RBP14.93□□□□□ -0.02
NPHP4-201ENST00000378156 TLX1P31314 330 aaPredicted RBP14.93□□□□□ -0.02
NPHP4-201ENST00000378156 SPAM1P38567 509 aa14.93□□□□□ -0.02
NPHP4-201ENST00000378156 TAS2R39P59534 338 aa14.93□□□□□ -0.02
NPHP4-201ENST00000378156 BNIP2Q12982 314 aa14.93□□□□□ -0.02
NPHP4-201ENST00000378156 GCNT7Q6ZNI0 430 aa14.93□□□□□ -0.02
NPHP4-201ENST00000378156 CHST9Q7L1S5 443 aa14.93□□□□□ -0.02
NPHP4-201ENST00000378156 ZNF655Q8N720 491 aaPredicted RBP14.93□□□□□ -0.02
NPHP4-201ENST00000378156 POC5Q8NA72 575 aa14.93□□□□□ -0.02
NPHP4-201ENST00000378156 KREMEN2Q8NCW0 462 aa14.93□□□□□ -0.02
NPHP4-201ENST00000378156 FAM156AQ8NDB6 213 aa14.93□□□□□ -0.02
NPHP4-201ENST00000378156 GPR156Q8NFN8 814 aa14.93□□□□□ -0.02
NPHP4-201ENST00000378156 USP7Q93009 1102 aa14.93□□□□□ -0.02
NPHP4-201ENST00000378156 PCYT2Q99447 389 aa14.93□□□□□ -0.02
NPHP4-201ENST00000378156 GPR21Q99679 349 aa14.93□□□□□ -0.02
NPHP4-201ENST00000378156 NOL11Q9H8H0 719 aaKnown RBP14.93□□□□□ -0.02
NPHP4-201ENST00000378156 PIGVQ9NUD9 493 aa14.93□□□□□ -0.02
NPHP4-201ENST00000378156 RWDD3Q9Y3V2 267 aa14.93□□□□□ -0.02
NPHP4-201ENST00000378156 VAV1P15498 845 aa14.93□□□□□ -0.02
NPHP4-201ENST00000378156 S100A1P23297 94 aa14.93□□□□□ -0.02
NPHP4-201ENST00000378156 ATAT1Q5SQI0 421 aa14.93□□□□□ -0.02
NPHP4-201ENST00000378156 HLA-DQA1Q5Y7H0 255 aa14.93□□□□□ -0.02
NPHP4-201ENST00000378156 CRTC3Q6UUV7 619 aa14.93□□□□□ -0.02
NPHP4-201ENST00000378156 GIPC3Q8TF64 312 aa14.93□□□□□ -0.02
NPHP4-201ENST00000378156 CIB1Q99828 191 aa14.93□□□□□ -0.02
NPHP4-201ENST00000378156 FAIM2Q9BWQ8 316 aa14.93□□□□□ -0.02
NPHP4-201ENST00000378156 STRA6Q9BX79 667 aa14.93□□□□□ -0.02
NPHP4-201ENST00000378156 ADAM7Q9H2U9 754 aa14.93□□□□□ -0.02
NPHP4-201ENST00000378156 RHBGQ9H310 441 aa14.93□□□□□ -0.02
NPHP4-201ENST00000378156 NMUR1Q9HB89 426 aa14.93□□□□□ -0.02
NPHP4-201ENST00000378156 PCDH12Q9NPG4 1184 aa14.93□□□□□ -0.02
NPHP4-201ENST00000378156 EURLQ9NYK6 297 aa14.93□□□□□ -0.02
NPHP4-201ENST00000378156 POMPQ9Y244 141 aa14.93□□□□□ -0.02
NPHP4-201ENST00000378156 H3BN98 237 aa14.92□□□□□ -0.02
NPHP4-201ENST00000378156 ZW10O43264 779 aa14.92□□□□□ -0.02
NPHP4-201ENST00000378156 TOP3BO95985 862 aaKnown RBP14.92□□□□□ -0.02
NPHP4-201ENST00000378156 RPL3P39023 403 aaKnown RBP14.92□□□□□ -0.02
NPHP4-201ENST00000378156 EMC10Q5UCC4 262 aa14.92□□□□□ -0.02
NPHP4-201ENST00000378156 MZT2AQ6P582 158 aa14.92□□□□□ -0.02
NPHP4-201ENST00000378156 RAVER1Q8IY67 606 aaKnown RBP14.92□□□□□ -0.02
NPHP4-201ENST00000378156 SLC35F5Q8WV83 523 aa14.92□□□□□ -0.02
NPHP4-201ENST00000378156 TCF12Q99081 682 aa14.92□□□□□ -0.02
NPHP4-201ENST00000378156 WDR12Q9GZL7 423 aaKnown RBP14.92□□□□□ -0.02
NPHP4-201ENST00000378156 ABCG8Q9H221 673 aa14.92□□□□□ -0.02
NPHP4-201ENST00000378156 TNKS2Q9H2K2 1166 aa14.92□□□□□ -0.02
NPHP4-201ENST00000378156 GDAP2Q9NXN4 497 aa14.92□□□□□ -0.02
NPHP4-201ENST00000378156 DOT1LQ8TEK3 1739 aa14.92□□□□□ -0.02
NPHP4-201ENST00000378156 WNT7BP56706 349 aa14.92□□□□□ -0.02
NPHP4-201ENST00000378156 STX4Q12846 297 aa14.92□□□□□ -0.02
NPHP4-201ENST00000378156 COL26A1Q96A83 441 aa14.92□□□□□ -0.02
NPHP4-201ENST00000378156 TCF25Q9BQ70 676 aa14.92□□□□□ -0.02
NPHP4-201ENST00000378156 RHOBTB2Q9BYZ6 727 aa14.92□□□□□ -0.02
NPHP4-201ENST00000378156 XYLT2Q9H1B5 865 aa14.92□□□□□ -0.02
NPHP4-201ENST00000378156 TBC1D3DA0A087WVF3 549 aa14.92□□□□□ -0.02
NPHP4-201ENST00000378156 TBC1D3IA0A087WXS9 549 aa14.92□□□□□ -0.02
NPHP4-201ENST00000378156 TBC1D3EA0A087X179 549 aa14.92□□□□□ -0.02
NPHP4-201ENST00000378156 TBC1D3KA0A087X1G2 549 aa14.92□□□□□ -0.02
NPHP4-201ENST00000378156 TBC1D3FA6NER0 549 aaPredicted RBP14.92□□□□□ -0.02
NPHP4-201ENST00000378156 FAM159BA6NKW6 160 aa14.92□□□□□ -0.02
NPHP4-201ENST00000378156 TBC1D3LB9A6J9 549 aa14.92□□□□□ -0.02
NPHP4-201ENST00000378156 AREL1O15033 823 aa14.92□□□□□ -0.02
NPHP4-201ENST00000378156 TBX18O95935 607 aa14.92□□□□□ -0.02
NPHP4-201ENST00000378156 TBC1D3HP0C7X1 549 aa14.92□□□□□ -0.02
NPHP4-201ENST00000378156 FEN1P39748 380 aaKnown RBP14.92□□□□□ -0.02
NPHP4-201ENST00000378156 MTTPP55157 894 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms