RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 RCAN2Q14206 197 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 KHDRBS2Q5VWX1 349 aaKnown RBP4.9□□□□□ -1.62
PCDH9-201ENST00000377861 ZNF470Q6ECI4 717 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 TAPT1Q6NXT6 567 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 GADL1Q6ZQY3 521 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 PRSS48Q7RTY5 328 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 ADGRA1Q86SQ6 560 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 SPATA7Q9P0W8 599 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 PKMP14618 531 aaKnown RBP4.9□□□□□ -1.62
PCDH9-201ENST00000377861 GOLGA7BQ2TAP0 167 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 ARMC8Q8IUR7 673 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 CCDC115Q96NT0 180 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 TSEN34Q9BSV6 310 aaKnown RBP4.9□□□□□ -1.62
PCDH9-201ENST00000377861 EPHX3Q9H6B9 360 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 C3P01024 1663 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 PPRC1Q5VV67 1664 aaKnown RBP4.9□□□□□ -1.62
PCDH9-201ENST00000377861 SULT1E1P49888 294 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 TBX4P57082 545 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 KCNJ2P63252 427 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 MEF2AQ02078 507 aaPredicted RBP4.9□□□□□ -1.62
PCDH9-201ENST00000377861 ELAC1Q9H777 363 aaKnown RBP4.9□□□□□ -1.62
PCDH9-201ENST00000377861 HCN4Q9Y3Q4 1203 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 SNAP23O00161 211 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 PRAF2O60831 178 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 MAPK3P27361 379 aaPredicted RBP4.9□□□□□ -1.62
PCDH9-201ENST00000377861 HOXC13P31276 330 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 VWA5B1Q5TIE3 1220 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 SERPINA11Q86U17 422 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 C2CD4AQ8NCU7 369 aaPredicted RBP4.9□□□□□ -1.62
PCDH9-201ENST00000377861 KAT5Q92993 513 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 C11orf49Q9H6J7 331 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 RPF2Q9H7B2 306 aaKnown RBP4.9□□□□□ -1.62
PCDH9-201ENST00000377861 GBA2Q9HCG7 927 aaPredicted RBP4.9□□□□□ -1.62
PCDH9-201ENST00000377861 TCAF1Q9Y4C2 921 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 MEGF11A6BM72 1044 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 RTL3Q8N8U3 475 aaKnown RBP4.9□□□□□ -1.62
PCDH9-201ENST00000377861 DEPDC7Q96QD5 511 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 SETD1AO15047 1707 aaKnown RBP4.9□□□□□ -1.62
PCDH9-201ENST00000377861 TRIM64BA6NI03 449 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 LZTS3O60299 673 aaPredicted RBP4.9□□□□□ -1.62
PCDH9-201ENST00000377861 RPP40O75818 363 aaKnown RBP4.9□□□□□ -1.62
PCDH9-201ENST00000377861 THRBP10828 461 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 GPR15P49685 360 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 POLR2JP52435 117 aaKnown RBP4.9□□□□□ -1.62
PCDH9-201ENST00000377861 LDLRAP1Q5SW96 308 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 ARMC12Q5T9G4 340 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 OR5K1Q8NHB7 308 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 CCNL2Q96S94 520 aaPredicted RBP4.9□□□□□ -1.62
PCDH9-201ENST00000377861 MAT2BQ9NZL9 334 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 MN1Q10571 1320 aaPredicted RBP4.9□□□□□ -1.62
PCDH9-201ENST00000377861 IFNGP01579 166 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 KITP10721 976 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 BGNP21810 368 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 HPCAP84074 193 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 P2RY8Q86VZ1 359 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 PAPD5Q8NDF8 572 aaKnown RBP4.9□□□□□ -1.62
PCDH9-201ENST00000377861 PLD4Q96BZ4 506 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 C1orf109Q9NX04 203 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 SERPINA1P01009 418 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 UGT2B4P06133 528 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 BMP7P18075 431 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 ATXN7L2Q5T6C5 722 aaPredicted RBP4.9□□□□□ -1.62
PCDH9-201ENST00000377861 LNX1Q8TBB1 728 aaPredicted RBP4.9□□□□□ -1.62
PCDH9-201ENST00000377861 FNDC8Q8TC99 324 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 VPS4AQ9UN37 437 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 PITPNM1O00562 1244 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 RBL1P28749 1068 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 CCDC157Q569K6 752 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 ACSBG2Q5FVE4 666 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 ZNF382Q96SR6 550 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 GPRC5DQ9NZD1 345 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 DDI2Q5TDH0 399 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 TMEM159Q96B96 161 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 FAM118BQ9BPY3 351 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 ERVK-5Q9HDB9 667 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 XPNPEP3Q9NQH7 507 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 NANSQ9NR45 359 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 SMYD2Q9NRG4 433 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 ZC3HC1Q86WB0 502 aaKnown RBP4.9□□□□□ -1.62
PCDH9-201ENST00000377861 ASIC5Q9NY37 505 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 MARCH2Q9P0N8 246 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 NR1D2Q14995 579 aa4.9□□□□□ -1.63
PCDH9-201ENST00000377861 KCNJ8Q15842 424 aa4.9□□□□□ -1.63
PCDH9-201ENST00000377861 COL21A1Q96P44 957 aa4.9□□□□□ -1.63
PCDH9-201ENST00000377861 CNOT2Q9NZN8 540 aaKnown RBP4.9□□□□□ -1.63
PCDH9-201ENST00000377861 CACNA1FO60840 1977 aa4.9□□□□□ -1.63
PCDH9-201ENST00000377861 RCBTB2O95199 551 aa4.9□□□□□ -1.63
PCDH9-201ENST00000377861 RPL7AP62424 266 aaKnown RBP4.9□□□□□ -1.63
PCDH9-201ENST00000377861 ADGRE1Q14246 886 aa4.9□□□□□ -1.63
PCDH9-201ENST00000377861 DTLQ9NZJ0 730 aa4.9□□□□□ -1.63
PCDH9-201ENST00000377861 PPT2Q9UMR5 302 aa4.9□□□□□ -1.63
PCDH9-201ENST00000377861 RAB19A4D1S5 217 aa4.9□□□□□ -1.63
PCDH9-201ENST00000377861 POLR1CO15160 346 aaPredicted RBP4.9□□□□□ -1.63
PCDH9-201ENST00000377861 LIMK1P53667 647 aa4.9□□□□□ -1.63
PCDH9-201ENST00000377861 LILRA4P59901 499 aa4.9□□□□□ -1.63
PCDH9-201ENST00000377861 TFAP2DQ7Z6R9 452 aa4.9□□□□□ -1.63
PCDH9-201ENST00000377861 A0A0U1RQF3 1178 aa4.9□□□□□ -1.63
PCDH9-201ENST00000377861 ABCB7O75027 752 aa4.9□□□□□ -1.63
PCDH9-201ENST00000377861 SMYD1Q8NB12 490 aa4.9□□□□□ -1.63
PCDH9-201ENST00000377861 CCDC106Q9BWC9 280 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms