RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 LRRC43Q8N309 656 aa13.12□□□□□ -0.31
ACTN1-202ENST00000376839 PAPD5Q8NDF8 572 aaKnown RBP13.12□□□□□ -0.31
ACTN1-202ENST00000376839 NUDT8Q8WV74 236 aa13.12□□□□□ -0.31
ACTN1-202ENST00000376839 BIRC7Q96CA5 298 aa13.12□□□□□ -0.31
ACTN1-202ENST00000376839 GPR21Q99679 349 aa13.12□□□□□ -0.31
ACTN1-202ENST00000376839 NANOGQ9H9S0 305 aa13.12□□□□□ -0.31
ACTN1-202ENST00000376839 LCHNA4D1U4 455 aa13.12□□□□□ -0.31
ACTN1-202ENST00000376839 BTN3A1O00481 513 aa13.12□□□□□ -0.31
ACTN1-202ENST00000376839 B4GAT1O43505 415 aa13.12□□□□□ -0.31
ACTN1-202ENST00000376839 VPS4BO75351 444 aa13.12□□□□□ -0.31
ACTN1-202ENST00000376839 LDLRP01130 860 aa13.12□□□□□ -0.31
ACTN1-202ENST00000376839 TFPTP0C1Z6 253 aa13.12□□□□□ -0.31
ACTN1-202ENST00000376839 C7P10643 843 aa13.12□□□□□ -0.31
ACTN1-202ENST00000376839 OR1E1P30953 314 aa13.12□□□□□ -0.31
ACTN1-202ENST00000376839 POLR2IP36954 125 aaKnown RBP13.12□□□□□ -0.31
ACTN1-202ENST00000376839 PBX3P40426 434 aa13.12□□□□□ -0.31
ACTN1-202ENST00000376839 PLA2G4EQ3MJ16 856 aa13.12□□□□□ -0.31
ACTN1-202ENST00000376839 SLC2A7Q6PXP3 512 aa13.12□□□□□ -0.31
ACTN1-202ENST00000376839 RALGPS2Q86X27 583 aaPredicted RBP13.12□□□□□ -0.31
ACTN1-202ENST00000376839 TBC1D21Q8IYX1 336 aa13.12□□□□□ -0.31
ACTN1-202ENST00000376839 TMEM199Q8N511 208 aa13.12□□□□□ -0.31
ACTN1-202ENST00000376839 PLEKHG4BQ96PX9 1271 aa13.12□□□□□ -0.31
ACTN1-202ENST00000376839 ADAM2Q99965 735 aa13.12□□□□□ -0.31
ACTN1-202ENST00000376839 CHID1Q9BWS9 393 aa13.12□□□□□ -0.31
ACTN1-202ENST00000376839 INTS10Q9NVR2 710 aaKnown RBP13.12□□□□□ -0.31
ACTN1-202ENST00000376839 ZNHIT2Q9UHR6 403 aa13.12□□□□□ -0.31
ACTN1-202ENST00000376839 PCTPQ9UKL6 214 aa13.12□□□□□ -0.31
ACTN1-202ENST00000376839 ANKRD36A6QL64 1941 aa13.11□□□□□ -0.31
ACTN1-202ENST00000376839 A0A0U1RQF3 1178 aa13.11□□□□□ -0.31
ACTN1-202ENST00000376839 SH3PXD2BA1X283 911 aa13.11□□□□□ -0.31
ACTN1-202ENST00000376839 H0Y858 1186 aa13.11□□□□□ -0.31
ACTN1-202ENST00000376839 SOAT2O75908 522 aa13.11□□□□□ -0.31
ACTN1-202ENST00000376839 TYMPP19971 482 aa13.11□□□□□ -0.31
ACTN1-202ENST00000376839 DCKP27707 260 aa13.11□□□□□ -0.31
ACTN1-202ENST00000376839 POLR2JP52435 117 aaKnown RBP13.11□□□□□ -0.31
ACTN1-202ENST00000376839 MAPK10P53779 464 aa13.11□□□□□ -0.31
ACTN1-202ENST00000376839 IRF5Q13568 498 aa13.11□□□□□ -0.31
ACTN1-202ENST00000376839 RBBP7Q16576 425 aa13.11□□□□□ -0.31
ACTN1-202ENST00000376839 ZIK1Q3SY52 487 aaPredicted RBP13.11□□□□□ -0.31
ACTN1-202ENST00000376839 HABP4Q5JVS0 413 aaKnown RBP13.11□□□□□ -0.31
ACTN1-202ENST00000376839 GNASQ5JWF2 1037 aa13.11□□□□□ -0.31
ACTN1-202ENST00000376839 OTUD3Q5T2D3 398 aaPredicted RBP13.11□□□□□ -0.31
ACTN1-202ENST00000376839 TMEM214Q6NUQ4 689 aaKnown RBP13.11□□□□□ -0.31
ACTN1-202ENST00000376839 USP51Q70EK9 711 aa13.11□□□□□ -0.31
ACTN1-202ENST00000376839 TSPEARQ8WU66 669 aa13.11□□□□□ -0.31
ACTN1-202ENST00000376839 BTN2A3PQ96KV6 586 aa13.11□□□□□ -0.31
ACTN1-202ENST00000376839 DOK1Q99704 481 aa13.11□□□□□ -0.31
ACTN1-202ENST00000376839 BRINP2Q9C0B6 783 aa13.11□□□□□ -0.31
ACTN1-202ENST00000376839 SYTL2Q9HCH5 934 aa13.11□□□□□ -0.31
ACTN1-202ENST00000376839 TLR9Q9NR96 1032 aa13.11□□□□□ -0.31
ACTN1-202ENST00000376839 TAS2R13Q9NYV9 303 aa13.11□□□□□ -0.31
ACTN1-202ENST00000376839 LEF1Q9UJU2 399 aaPredicted RBP13.11□□□□□ -0.31
ACTN1-202ENST00000376839 SNAP91O60641 907 aa13.11□□□□□ -0.31
ACTN1-202ENST00000376839 SNX2O60749 519 aa13.11□□□□□ -0.31
ACTN1-202ENST00000376839 PRAMEF11O60813 436 aa13.11□□□□□ -0.31
ACTN1-202ENST00000376839 ESRRBO95718 433 aa13.11□□□□□ -0.31
ACTN1-202ENST00000376839 THPOP40225 353 aa13.11□□□□□ -0.31
ACTN1-202ENST00000376839 HK3P52790 923 aa13.11□□□□□ -0.31
ACTN1-202ENST00000376839 ADARB1P78563 741 aaKnown RBP13.11□□□□□ -0.31
ACTN1-202ENST00000376839 RAD51Q06609 339 aa13.11□□□□□ -0.31
ACTN1-202ENST00000376839 SELPLGQ14242 412 aa13.11□□□□□ -0.31
ACTN1-202ENST00000376839 ZBTB46Q86UZ6 589 aa13.11□□□□□ -0.31
ACTN1-202ENST00000376839 SERINC5Q86VE9 423 aa13.11□□□□□ -0.31
ACTN1-202ENST00000376839 ATP6V0D2Q8N8Y2 350 aa13.11□□□□□ -0.31
ACTN1-202ENST00000376839 OR4K2Q8NGD2 314 aa13.11□□□□□ -0.31
ACTN1-202ENST00000376839 MIPOL1Q8TD10 442 aa13.11□□□□□ -0.31
ACTN1-202ENST00000376839 PEX13Q92968 403 aa13.11□□□□□ -0.31
ACTN1-202ENST00000376839 RNF145Q96MT1 663 aa13.11□□□□□ -0.31
ACTN1-202ENST00000376839 CDK15Q96Q40 435 aa13.11□□□□□ -0.31
ACTN1-202ENST00000376839 HGH1Q9BTY7 390 aa13.11□□□□□ -0.31
ACTN1-202ENST00000376839 MUC13Q9H3R2 512 aa13.11□□□□□ -0.31
ACTN1-202ENST00000376839 Q9Y3F1 56 aa13.11□□□□□ -0.31
ACTN1-202ENST00000376839 A0A0D9SEW6 157 aa13.1□□□□□ -0.31
ACTN1-202ENST00000376839 ELK4P28324 431 aa13.1□□□□□ -0.31
ACTN1-202ENST00000376839 ZNF140P52738 457 aaPredicted RBP13.1□□□□□ -0.31
ACTN1-202ENST00000376839 EEFSECP57772 596 aaKnown RBP13.1□□□□□ -0.31
ACTN1-202ENST00000376839 PARP15Q460N3 678 aa13.1□□□□□ -0.31
ACTN1-202ENST00000376839 SPATS1Q496A3 300 aa13.1□□□□□ -0.31
ACTN1-202ENST00000376839 XKR5Q6UX68 686 aa13.1□□□□□ -0.31
ACTN1-202ENST00000376839 CROCCP3Q8IVE0 287 aa13.1□□□□□ -0.31
ACTN1-202ENST00000376839 CFAP52Q8N1V2 620 aa13.1□□□□□ -0.31
ACTN1-202ENST00000376839 PROKR1Q8TCW9 393 aa13.1□□□□□ -0.31
ACTN1-202ENST00000376839 B3GALT6Q96L58 329 aa13.1□□□□□ -0.31
ACTN1-202ENST00000376839 TRIB3Q96RU7 358 aa13.1□□□□□ -0.31
ACTN1-202ENST00000376839 HBEGFQ99075 208 aa13.1□□□□□ -0.31
ACTN1-202ENST00000376839 ZBED2Q9BTP6 218 aa13.1□□□□□ -0.31
ACTN1-202ENST00000376839 IFT80Q9P2H3 777 aaPredicted RBP13.1□□□□□ -0.31
ACTN1-202ENST00000376839 EIF2B4Q9UI10 523 aaKnown RBP13.1□□□□□ -0.31
ACTN1-202ENST00000376839 ZNF639Q9UID6 485 aa13.1□□□□□ -0.31
ACTN1-202ENST00000376839 PCDHB8Q9UN66 801 aa13.1□□□□□ -0.31
ACTN1-202ENST00000376839 MAGED1Q9Y5V3 778 aaPredicted RBP13.1□□□□□ -0.31
ACTN1-202ENST00000376839 DRGXA6NNA5 263 aa13.1□□□□□ -0.31
ACTN1-202ENST00000376839 OR4F21O95013 312 aa13.1□□□□□ -0.31
ACTN1-202ENST00000376839 HNRNPCP07910 306 aaKnown RBP eCLIP13.1□□□□□ -0.31
ACTN1-202ENST00000376839 UROSP10746 265 aa13.1□□□□□ -0.31
ACTN1-202ENST00000376839 RGRP47804 291 aa13.1□□□□□ -0.31
ACTN1-202ENST00000376839 DSC3Q14574 896 aa13.1□□□□□ -0.31
ACTN1-202ENST00000376839 PTPRNQ16849 979 aa13.1□□□□□ -0.31
ACTN1-202ENST00000376839 AAK1Q2M2I8 961 aa13.1□□□□□ -0.31
ACTN1-202ENST00000376839 SPRYD7Q5W111 196 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms