RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 CLLU1OSQ5K130 101 aa17.84■□□□□ 0.45
PTPDC1-202ENST00000375360 CHST15Q7LFX5 561 aaPredicted RBP17.84■□□□□ 0.45
PTPDC1-202ENST00000375360 MMAAQ8IVH4 418 aaKnown RBP17.84■□□□□ 0.45
PTPDC1-202ENST00000375360 PGAP2Q9UHJ9 254 aa17.84■□□□□ 0.45
PTPDC1-202ENST00000375360 SQORQ9Y6N5 450 aa17.84■□□□□ 0.45
PTPDC1-202ENST00000375360 A0A1W2PQ67 120 aa17.83■□□□□ 0.45
PTPDC1-202ENST00000375360 RALGDSQ12967 914 aa17.83■□□□□ 0.45
PTPDC1-202ENST00000375360 OR2AP1Q8NGE2 309 aa17.83■□□□□ 0.45
PTPDC1-202ENST00000375360 NUMA1Q14980 2115 aa17.83■□□□□ 0.45
PTPDC1-202ENST00000375360 MYH4Q9Y623 1939 aa17.83■□□□□ 0.45
PTPDC1-202ENST00000375360 GSC2O15499 205 aa17.83■□□□□ 0.44
PTPDC1-202ENST00000375360 SGTAO43765 313 aa17.83■□□□□ 0.44
PTPDC1-202ENST00000375360 RFPL2O75678 378 aa17.83■□□□□ 0.44
PTPDC1-202ENST00000375360 FCGR1AP12314 374 aa17.83■□□□□ 0.44
PTPDC1-202ENST00000375360 CCNHP51946 323 aaPredicted RBP17.83■□□□□ 0.44
PTPDC1-202ENST00000375360 ERVK-21P61565 698 aa17.83■□□□□ 0.44
PTPDC1-202ENST00000375360 LSM12Q3MHD2 195 aaKnown RBP17.83■□□□□ 0.44
PTPDC1-202ENST00000375360 VPS26BQ4G0F5 336 aa17.83■□□□□ 0.44
PTPDC1-202ENST00000375360 FGD3Q5JSP0 725 aa17.83■□□□□ 0.44
PTPDC1-202ENST00000375360 TMEM198Q66K66 360 aa17.83■□□□□ 0.44
PTPDC1-202ENST00000375360 ADAM7Q9H2U9 754 aa17.83■□□□□ 0.44
PTPDC1-202ENST00000375360 CAPN1P07384 714 aa17.83■□□□□ 0.44
PTPDC1-202ENST00000375360 CARD16Q5EG05 197 aa17.83■□□□□ 0.44
PTPDC1-202ENST00000375360 SLC39A5Q6ZMH5 540 aa17.83■□□□□ 0.44
PTPDC1-202ENST00000375360 BADQ92934 168 aa17.83■□□□□ 0.44
PTPDC1-202ENST00000375360 SLC2A13Q96QE2 648 aa17.83■□□□□ 0.44
PTPDC1-202ENST00000375360 FAM159BA6NKW6 160 aa17.82■□□□□ 0.44
PTPDC1-202ENST00000375360 NBNO60934 754 aa17.82■□□□□ 0.44
PTPDC1-202ENST00000375360 TYRP14679 529 aa17.82■□□□□ 0.44
PTPDC1-202ENST00000375360 GDI1P31150 447 aa17.82■□□□□ 0.44
PTPDC1-202ENST00000375360 POLD2P49005 469 aa17.82■□□□□ 0.44
PTPDC1-202ENST00000375360 VITQ6UXI7 678 aa17.82■□□□□ 0.44
PTPDC1-202ENST00000375360 EBF3Q9H4W6 596 aa17.82■□□□□ 0.44
PTPDC1-202ENST00000375360 GJD2Q9UKL4 321 aa17.82■□□□□ 0.44
PTPDC1-202ENST00000375360 C15orf41Q9Y2V0 281 aa17.82■□□□□ 0.44
PTPDC1-202ENST00000375360 IDO1P14902 403 aa17.82■□□□□ 0.44
PTPDC1-202ENST00000375360 TM4SF4P48230 202 aa17.82■□□□□ 0.44
PTPDC1-202ENST00000375360 PTDSS1P48651 473 aaKnown RBP17.82■□□□□ 0.44
PTPDC1-202ENST00000375360 RFTN1Q14699 578 aaPredicted RBP17.82■□□□□ 0.44
PTPDC1-202ENST00000375360 IL23RQ5VWK5 629 aa17.82■□□□□ 0.44
PTPDC1-202ENST00000375360 FAM13CQ8NE31 585 aa17.82■□□□□ 0.44
PTPDC1-202ENST00000375360 PRKAG3Q9UGI9 489 aa17.82■□□□□ 0.44
PTPDC1-202ENST00000375360 ENTPD4Q9Y227 616 aa17.82■□□□□ 0.44
PTPDC1-202ENST00000375360 AXIN1O15169 862 aa17.82■□□□□ 0.44
PTPDC1-202ENST00000375360 CSTF3Q12996 717 aaKnown RBP17.82■□□□□ 0.44
PTPDC1-202ENST00000375360 LCP2Q13094 533 aa17.82■□□□□ 0.44
PTPDC1-202ENST00000375360 TJAP1Q5JTD0 557 aa17.82■□□□□ 0.44
PTPDC1-202ENST00000375360 ZNF438Q7Z4V0 828 aa17.82■□□□□ 0.44
PTPDC1-202ENST00000375360 ZC3HC1Q86WB0 502 aaKnown RBP17.82■□□□□ 0.44
PTPDC1-202ENST00000375360 ZDHHC13Q8IUH4 622 aa17.82■□□□□ 0.44
PTPDC1-202ENST00000375360 PHYKPLQ8IUZ5 450 aa17.82■□□□□ 0.44
PTPDC1-202ENST00000375360 ZC3H7AQ8IWR0 971 aaKnown RBP17.82■□□□□ 0.44
PTPDC1-202ENST00000375360 MAGEE2Q8TD90 523 aaPredicted RBP17.82■□□□□ 0.44
PTPDC1-202ENST00000375360 OSCP1Q8WVF1 389 aa17.82■□□□□ 0.44
PTPDC1-202ENST00000375360 UBE2E3Q969T4 207 aa17.82■□□□□ 0.44
PTPDC1-202ENST00000375360 ANAPC2Q9UJX6 822 aa17.82■□□□□ 0.44
PTPDC1-202ENST00000375360 PTGES3LE9PB15 166 aa17.82■□□□□ 0.44
PTPDC1-202ENST00000375360 M0R3G1 203 aa17.82■□□□□ 0.44
PTPDC1-202ENST00000375360 RFXANKO14593 260 aa17.82■□□□□ 0.44
PTPDC1-202ENST00000375360 CXCR2P25025 360 aa17.82■□□□□ 0.44
PTPDC1-202ENST00000375360 GNPDA1P46926 289 aa17.82■□□□□ 0.44
PTPDC1-202ENST00000375360 SF1Q15637 639 aaKnown RBP17.82■□□□□ 0.44
PTPDC1-202ENST00000375360 PHKG1Q16816 387 aa17.82■□□□□ 0.44
PTPDC1-202ENST00000375360 ZIK1Q3SY52 487 aaPredicted RBP17.82■□□□□ 0.44
PTPDC1-202ENST00000375360 PLEKHG4Q58EX7 1191 aa17.82■□□□□ 0.44
PTPDC1-202ENST00000375360 SGK2Q9HBY8 427 aa17.82■□□□□ 0.44
PTPDC1-202ENST00000375360 DNAJC11Q9NVH1 559 aa17.82■□□□□ 0.44
PTPDC1-202ENST00000375360 SOHLH2Q9NX45 425 aa17.82■□□□□ 0.44
PTPDC1-202ENST00000375360 HNRNPRO43390 633 aaKnown RBP17.81■□□□□ 0.44
PTPDC1-202ENST00000375360 ITM2AO43736 263 aa17.81■□□□□ 0.44
PTPDC1-202ENST00000375360 TCEA3O75764 348 aa17.81■□□□□ 0.44
PTPDC1-202ENST00000375360 CLPTM1O96005 669 aa17.81■□□□□ 0.44
PTPDC1-202ENST00000375360 CREB5Q02930 508 aa17.81■□□□□ 0.44
PTPDC1-202ENST00000375360 SERINC3Q13530 473 aa17.81■□□□□ 0.44
PTPDC1-202ENST00000375360 CAPN13Q6MZZ7 669 aaPredicted RBP17.81■□□□□ 0.44
PTPDC1-202ENST00000375360 ZFP1Q6P2D0 407 aa17.81■□□□□ 0.44
PTPDC1-202ENST00000375360 PARGQ86W56 976 aa17.81■□□□□ 0.44
PTPDC1-202ENST00000375360 COLGALT2Q8IYK4 626 aa17.81■□□□□ 0.44
PTPDC1-202ENST00000375360 SPACA7Q96KW9 195 aa17.81■□□□□ 0.44
PTPDC1-202ENST00000375360 SLC28A1O00337 649 aa17.81■□□□□ 0.44
PTPDC1-202ENST00000375360 NSG1P42857 185 aa17.81■□□□□ 0.44
PTPDC1-202ENST00000375360 CENPAP49450 140 aa17.81■□□□□ 0.44
PTPDC1-202ENST00000375360 CHRNA6Q15825 494 aa17.81■□□□□ 0.44
PTPDC1-202ENST00000375360 ATAD3BQ5T9A4 648 aa17.81■□□□□ 0.44
PTPDC1-202ENST00000375360 RPS27LQ71UM5 84 aaKnown RBP17.81■□□□□ 0.44
PTPDC1-202ENST00000375360 C17orf64Q86WR6 236 aa17.81■□□□□ 0.44
PTPDC1-202ENST00000375360 PLD3Q8IV08 490 aa17.81■□□□□ 0.44
PTPDC1-202ENST00000375360 NPWQ8N729 165 aa17.81■□□□□ 0.44
PTPDC1-202ENST00000375360 ZNF778Q96MU6 729 aa17.81■□□□□ 0.44
PTPDC1-202ENST00000375360 UGT2B28Q9BY64 529 aa17.81■□□□□ 0.44
PTPDC1-202ENST00000375360 LRMDAQ9H2I8 198 aa17.81■□□□□ 0.44
PTPDC1-202ENST00000375360 H0YGN5 161 aa17.81■□□□□ 0.44
PTPDC1-202ENST00000375360 BNIP1Q12981 228 aa17.81■□□□□ 0.44
PTPDC1-202ENST00000375360 ACTRT2Q8TDY3 377 aa17.81■□□□□ 0.44
PTPDC1-202ENST00000375360 ZNF599Q96NL3 588 aa17.81■□□□□ 0.44
PTPDC1-202ENST00000375360 SSU72Q9NP77 194 aaKnown RBP17.81■□□□□ 0.44
PTPDC1-202ENST00000375360 NFS1Q9Y697 457 aa17.81■□□□□ 0.44
PTPDC1-202ENST00000375360 ZNF840PA6NDX5 716 aa17.8■□□□□ 0.44
PTPDC1-202ENST00000375360 GABRDO14764 452 aa17.8■□□□□ 0.44
PTPDC1-202ENST00000375360 OCM2P0CE71 109 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms