RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 SLC51AQ86UW1 340 aa11.46□□□□□ -0.57
PTCH1-203ENST00000375274 P2RY8Q86VZ1 359 aa11.46□□□□□ -0.57
PTCH1-203ENST00000375274 HJURPQ8NCD3 748 aaPredicted RBP11.46□□□□□ -0.57
PTCH1-203ENST00000375274 OR10A6Q8NH74 314 aa11.46□□□□□ -0.57
PTCH1-203ENST00000375274 CLP1Q92989 425 aaKnown RBP11.46□□□□□ -0.57
PTCH1-203ENST00000375274 NTAN1Q96AB6 310 aa11.46□□□□□ -0.57
PTCH1-203ENST00000375274 FCRL5Q96RD9 977 aa11.46□□□□□ -0.57
PTCH1-203ENST00000375274 ZFYVE1Q9HBF4 777 aa11.46□□□□□ -0.57
PTCH1-203ENST00000375274 SSR3Q9UNL2 185 aa11.46□□□□□ -0.57
PTCH1-203ENST00000375274 RAI2Q9Y5P3 530 aa11.46□□□□□ -0.57
PTCH1-203ENST00000375274 HAT1O14929 419 aa11.46□□□□□ -0.57
PTCH1-203ENST00000375274 SCELO95171 688 aa11.46□□□□□ -0.57
PTCH1-203ENST00000375274 C22orf31O95567 290 aa11.46□□□□□ -0.57
PTCH1-203ENST00000375274 CLCNKBP51801 687 aa11.46□□□□□ -0.57
PTCH1-203ENST00000375274 SRP54P61011 504 aaKnown RBP11.46□□□□□ -0.57
PTCH1-203ENST00000375274 ZSWIM7Q19AV6 140 aa11.46□□□□□ -0.57
PTCH1-203ENST00000375274 ANXA8L1Q5VT79 327 aa11.46□□□□□ -0.57
PTCH1-203ENST00000375274 UXS1Q8NBZ7 420 aa11.46□□□□□ -0.57
PTCH1-203ENST00000375274 LPIN3Q9BQK8 851 aa11.46□□□□□ -0.57
PTCH1-203ENST00000375274 TPK1Q9H3S4 243 aa11.46□□□□□ -0.57
PTCH1-203ENST00000375274 GMIPQ9P107 970 aa11.46□□□□□ -0.57
PTCH1-203ENST00000375274 RAB23Q9ULC3 237 aa11.46□□□□□ -0.57
PTCH1-203ENST00000375274 ARIH1Q9Y4X5 557 aaPredicted RBP11.46□□□□□ -0.57
PTCH1-203ENST00000375274 LMO7Q8WWI1 1683 aa11.46□□□□□ -0.57
PTCH1-203ENST00000375274 GUCY1B2O75343 617 aa11.46□□□□□ -0.58
PTCH1-203ENST00000375274 CSNK2BP67870 215 aa11.46□□□□□ -0.58
PTCH1-203ENST00000375274 QPRTQ15274 297 aa11.46□□□□□ -0.58
PTCH1-203ENST00000375274 ERICH5Q6P6B1 374 aa11.46□□□□□ -0.58
PTCH1-203ENST00000375274 FBXL19Q6PCT2 694 aa11.46□□□□□ -0.58
PTCH1-203ENST00000375274 PTCHD4Q6ZW05 846 aa11.46□□□□□ -0.58
PTCH1-203ENST00000375274 AHSA2Q719I0 299 aa11.46□□□□□ -0.58
PTCH1-203ENST00000375274 R3HCC1LQ7Z5L2 792 aaKnown RBP11.46□□□□□ -0.58
PTCH1-203ENST00000375274 AKAP14Q86UN6 197 aa11.46□□□□□ -0.58
PTCH1-203ENST00000375274 GATAD2AQ86YP4 633 aa11.46□□□□□ -0.58
PTCH1-203ENST00000375274 SLC7A6OSQ96CW6 309 aaPredicted RBP11.46□□□□□ -0.58
PTCH1-203ENST00000375274 OSBPL10Q9BXB5 764 aa11.46□□□□□ -0.58
PTCH1-203ENST00000375274 TRIM39Q9HCM9 518 aa11.46□□□□□ -0.58
PTCH1-203ENST00000375274 MRPS7Q9Y2R9 242 aaKnown RBP11.46□□□□□ -0.58
PTCH1-203ENST00000375274 MFHAS1Q9Y4C4 1052 aa11.46□□□□□ -0.58
PTCH1-203ENST00000375274 CCDC162PA2VCL2 907 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 OR6C75A6NL08 312 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 DLX3O60479 287 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 NR2F1P10589 423 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 NTSP30990 170 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 UGT2B15P54855 530 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 SFT2D3Q587I9 215 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 MZT2AQ6P582 158 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 KLHDC10Q6PID8 442 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 TIFABQ6ZNK6 161 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 PDSS2Q86YH6 399 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 ERI1Q8IV48 349 aaKnown RBP11.45□□□□□ -0.58
PTCH1-203ENST00000375274 MTMR14Q8NCE2 650 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 ZNF671Q8TAW3 534 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 ACBD6Q9BR61 282 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 CNTN3Q9P232 1028 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 CIDEBQ9UHD4 219 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 PSME2Q9UL46 239 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 TMA7Q9Y2S6 64 aaKnown RBP11.45□□□□□ -0.58
PTCH1-203ENST00000375274 E7ENX8 843 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 TRBC1P01850 177 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 POLR2EP19388 210 aaKnown RBP11.45□□□□□ -0.58
PTCH1-203ENST00000375274 CXCR2P25025 360 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 CPTPQ5TA50 214 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 DOK6Q6PKX4 331 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 METTL3Q86U44 580 aaKnown RBP11.45□□□□□ -0.58
PTCH1-203ENST00000375274 RASAL3Q86YV0 1011 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 BRSK1Q8TDC3 778 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 PSMG2Q969U7 264 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 PKP2Q99959 881 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 SLC39A8Q9C0K1 460 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 BRD9Q9H8M2 597 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 PIGVQ9NUD9 493 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 EIF2B4Q9UI10 523 aaKnown RBP11.45□□□□□ -0.58
PTCH1-203ENST00000375274 ZDHHC2Q9UIJ5 367 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 OAZ3Q9UMX2 235 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 SLC9A8Q9Y2E8 581 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 WBP11Q9Y2W2 641 aaKnown RBP11.45□□□□□ -0.58
PTCH1-203ENST00000375274 KCPQ6ZWJ8 1503 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 C1RP00736 705 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 ELP6Q0PNE2 266 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 DUSP4Q13115 394 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 SPRED3Q2MJR0 410 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 MBLAC2Q68D91 279 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 CYP20A1Q6UW02 462 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 OLFML1Q6UWY5 402 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 USP50Q70EL3 339 aaPredicted RBP11.45□□□□□ -0.58
PTCH1-203ENST00000375274 ZC3HC1Q86WB0 502 aaKnown RBP11.45□□□□□ -0.58
PTCH1-203ENST00000375274 CPNE9Q8IYJ1 553 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 SLC34A3Q8N130 599 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 ZNF557Q8N988 423 aaPredicted RBP11.45□□□□□ -0.58
PTCH1-203ENST00000375274 PIK3C3Q8NEB9 887 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 NUSAP1Q9BXS6 441 aaKnown RBP11.45□□□□□ -0.58
PTCH1-203ENST00000375274 ADAM7Q9H2U9 754 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 NUDT4Q9NZJ9 180 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 SUCOQ9UBS9 1254 aaKnown RBP11.45□□□□□ -0.58
PTCH1-203ENST00000375274 PCDHGC4Q9Y5F7 938 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 TMEM233B4DJY2 109 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 PDLIM1O00151 329 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 PQBP1O60828 265 aaKnown RBP11.45□□□□□ -0.58
PTCH1-203ENST00000375274 BMP10O95393 424 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms