RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 TDRD1Q9BXT4 1180 aaKnown RBP16.92■□□□□ 0.3
RXRB-201ENST00000374680 MAGEH1Q9H213 219 aa16.92■□□□□ 0.3
RXRB-201ENST00000374680 INTS7Q9NVH2 962 aaKnown RBP16.92■□□□□ 0.3
RXRB-201ENST00000374680 NUP214P35658 2090 aaPredicted RBP16.91■□□□□ 0.3
RXRB-201ENST00000374680 H3BNC9 293 aa16.91■□□□□ 0.3
RXRB-201ENST00000374680 SYNCRIPO60506 623 aaKnown RBP16.91■□□□□ 0.3
RXRB-201ENST00000374680 KERAO60938 352 aa16.91■□□□□ 0.3
RXRB-201ENST00000374680 PRKCQQ04759 706 aa16.91■□□□□ 0.3
RXRB-201ENST00000374680 LRRC58Q96CX6 371 aa16.91■□□□□ 0.3
RXRB-201ENST00000374680 TFB2MQ9H5Q4 396 aaKnown RBP16.91■□□□□ 0.3
RXRB-201ENST00000374680 RAB26Q9ULW5 256 aa16.91■□□□□ 0.3
RXRB-201ENST00000374680 TMEM189-UBE2V1I3L0A0 370 aa16.91■□□□□ 0.3
RXRB-201ENST00000374680 VPS26AO75436 327 aa16.91■□□□□ 0.3
RXRB-201ENST00000374680 HSPA8P11142 646 aaKnown RBP16.91■□□□□ 0.3
RXRB-201ENST00000374680 SLC6A2P23975 617 aa16.91■□□□□ 0.3
RXRB-201ENST00000374680 ALDH7A1P49419 539 aaKnown RBP16.91■□□□□ 0.3
RXRB-201ENST00000374680 DGKQP52824 942 aa16.91■□□□□ 0.3
RXRB-201ENST00000374680 ARF5P84085 180 aa16.91■□□□□ 0.3
RXRB-201ENST00000374680 CYP51A1Q16850 503 aa16.91■□□□□ 0.3
RXRB-201ENST00000374680 CTSL3PQ5NE16 218 aa16.91■□□□□ 0.3
RXRB-201ENST00000374680 LYSMD3Q7Z3D4 306 aa16.91■□□□□ 0.3
RXRB-201ENST00000374680 TRIML2Q8N7C3 387 aa16.91■□□□□ 0.3
RXRB-201ENST00000374680 ZFP28Q8NHY6 868 aa16.91■□□□□ 0.3
RXRB-201ENST00000374680 WFDC5Q8TCV5 224 aa16.91■□□□□ 0.3
RXRB-201ENST00000374680 MTFMTQ96DP5 389 aaKnown RBP16.91■□□□□ 0.3
RXRB-201ENST00000374680 PPM1MQ96MI6 270 aa16.91■□□□□ 0.3
RXRB-201ENST00000374680 PLEKHG4BQ96PX9 1271 aa16.91■□□□□ 0.3
RXRB-201ENST00000374680 FNIP2Q9P278 1114 aa16.91■□□□□ 0.3
RXRB-201ENST00000374680 PCNAP12004 261 aa16.9■□□□□ 0.3
RXRB-201ENST00000374680 SELPP16109 830 aa16.9■□□□□ 0.3
RXRB-201ENST00000374680 IL2P60568 153 aa16.9■□□□□ 0.3
RXRB-201ENST00000374680 ACVR1Q04771 509 aa16.9■□□□□ 0.3
RXRB-201ENST00000374680 LRRC73Q5JTD7 316 aa16.9■□□□□ 0.3
RXRB-201ENST00000374680 SLC2A7Q6PXP3 512 aa16.9■□□□□ 0.3
RXRB-201ENST00000374680 AFTPHQ6ULP2 937 aa16.9■□□□□ 0.3
RXRB-201ENST00000374680 PHYKPLQ8IUZ5 450 aa16.9■□□□□ 0.3
RXRB-201ENST00000374680 OR2T34Q8NGX1 318 aa16.9■□□□□ 0.3
RXRB-201ENST00000374680 OR2T3Q8NH03 318 aa16.9■□□□□ 0.3
RXRB-201ENST00000374680 EID2BQ96D98 161 aa16.9■□□□□ 0.3
RXRB-201ENST00000374680 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.9■□□□□ 0.3
RXRB-201ENST00000374680 FXYD1O00168 92 aa16.9■□□□□ 0.3
RXRB-201ENST00000374680 KDELR3O43731 214 aa16.9■□□□□ 0.3
RXRB-201ENST00000374680 EPOP01588 193 aa16.9■□□□□ 0.3
RXRB-201ENST00000374680 CYBBP04839 570 aa16.9■□□□□ 0.3
RXRB-201ENST00000374680 RPLP2P05387 115 aaKnown RBP16.9■□□□□ 0.3
RXRB-201ENST00000374680 PABPC4LP0CB38 370 aaKnown RBP16.9■□□□□ 0.3
RXRB-201ENST00000374680 MBL2P11226 248 aaPredicted RBP16.9■□□□□ 0.3
RXRB-201ENST00000374680 CDH4P55283 916 aa16.9■□□□□ 0.3
RXRB-201ENST00000374680 RHOAP61586 193 aa16.9■□□□□ 0.3
RXRB-201ENST00000374680 RING1Q06587 406 aa16.9■□□□□ 0.3
RXRB-201ENST00000374680 KANK2Q63ZY3 851 aa16.9■□□□□ 0.3
RXRB-201ENST00000374680 IL27RAQ6UWB1 636 aa16.9■□□□□ 0.3
RXRB-201ENST00000374680 DNAJC14Q6Y2X3 702 aaPredicted RBP16.9■□□□□ 0.3
RXRB-201ENST00000374680 FRA10AC1Q70Z53 315 aa16.9■□□□□ 0.3
RXRB-201ENST00000374680 FAM47BQ8NA70 645 aa16.9■□□□□ 0.3
RXRB-201ENST00000374680 METTL6Q8TCB7 284 aa16.9■□□□□ 0.3
RXRB-201ENST00000374680 CCT7Q99832 543 aa16.9■□□□□ 0.3
RXRB-201ENST00000374680 FAM8A1Q9UBU6 413 aa16.9■□□□□ 0.3
RXRB-201ENST00000374680 AFF4Q9UHB7 1163 aaKnown RBP16.9■□□□□ 0.3
RXRB-201ENST00000374680 LCHNA4D1U4 455 aa16.9■□□□□ 0.3
RXRB-201ENST00000374680 CLGNO14967 610 aa16.9■□□□□ 0.3
RXRB-201ENST00000374680 TNFAIP8O95379 198 aa16.9■□□□□ 0.3
RXRB-201ENST00000374680 SLC7A1P30825 629 aa16.9■□□□□ 0.3
RXRB-201ENST00000374680 RPL5P46777 297 aaKnown RBP16.9■□□□□ 0.3
RXRB-201ENST00000374680 KCNK10P57789 538 aa16.9■□□□□ 0.3
RXRB-201ENST00000374680 SMAD3P84022 425 aaKnown RBP16.9■□□□□ 0.3
RXRB-201ENST00000374680 TAF1AQ15573 450 aaPredicted RBP16.9■□□□□ 0.3
RXRB-201ENST00000374680 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.9■□□□□ 0.31e-19■■■■■ 54.9
RXRB-201ENST00000374680 TPGS1Q6ZTW0 290 aa16.9■□□□□ 0.3
RXRB-201ENST00000374680 CATSPER1Q8NEC5 780 aa16.9■□□□□ 0.3
RXRB-201ENST00000374680 CYGBQ8WWM9 190 aa16.9■□□□□ 0.3
RXRB-201ENST00000374680 TNKS2Q9H2K2 1166 aa16.9■□□□□ 0.3
RXRB-201ENST00000374680 DHRS12A0PJE2 317 aa16.89■□□□□ 0.29
RXRB-201ENST00000374680 SMAD6O43541 496 aaKnown RBP16.89■□□□□ 0.29
RXRB-201ENST00000374680 PYGLP06737 847 aa16.89■□□□□ 0.29
RXRB-201ENST00000374680 OGNP20774 298 aaKnown RBP16.89■□□□□ 0.29
RXRB-201ENST00000374680 TM4SF4P48230 202 aa16.89■□□□□ 0.29
RXRB-201ENST00000374680 GALNT1Q10472 559 aaPredicted RBP16.89■□□□□ 0.29
RXRB-201ENST00000374680 PPP1R8Q12972 351 aaKnown RBP16.89■□□□□ 0.29
RXRB-201ENST00000374680 ARMC3Q5W041 872 aa16.89■□□□□ 0.29
RXRB-201ENST00000374680 TXNDC8Q6A555 127 aa16.89■□□□□ 0.29
RXRB-201ENST00000374680 ANKS3Q6ZW76 656 aa16.89■□□□□ 0.29
RXRB-201ENST00000374680 OFCC1Q8IZS5 231 aa16.89■□□□□ 0.29
RXRB-201ENST00000374680 GPR150Q8NGU9 434 aa16.89■□□□□ 0.29
RXRB-201ENST00000374680 EFHD1Q9BUP0 239 aa16.89■□□□□ 0.29
RXRB-201ENST00000374680 OCEL1Q9H607 264 aa16.89■□□□□ 0.29
RXRB-201ENST00000374680 TRPM5Q9NZQ8 1165 aa16.89■□□□□ 0.29
RXRB-201ENST00000374680 C8BP07358 591 aa16.89■□□□□ 0.29
RXRB-201ENST00000374680 CAPN1P07384 714 aa16.89■□□□□ 0.29
RXRB-201ENST00000374680 GJA1P17302 382 aa16.89■□□□□ 0.29
RXRB-201ENST00000374680 IL12AP29459 219 aa16.89■□□□□ 0.29
RXRB-201ENST00000374680 HSPA7P48741 367 aa16.89■□□□□ 0.29
RXRB-201ENST00000374680 ERVPABLB-1P60509 514 aa16.89■□□□□ 0.29
RXRB-201ENST00000374680 TYSND1Q2T9J0 566 aa16.89■□□□□ 0.29
RXRB-201ENST00000374680 LETMD1Q6P1Q0 360 aa16.89■□□□□ 0.29
RXRB-201ENST00000374680 KLHDC10Q6PID8 442 aa16.89■□□□□ 0.29
RXRB-201ENST00000374680 APLFQ8IW19 511 aaPredicted RBP16.89■□□□□ 0.29
RXRB-201ENST00000374680 ARL14EPQ8N8R7 260 aaPredicted RBP16.89■□□□□ 0.29
RXRB-201ENST00000374680 CD200R1Q8TD46 325 aa16.89■□□□□ 0.29
RXRB-201ENST00000374680 DERL2Q9GZP9 239 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms