RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 ZDHHC18Q9NUE0 388 aa11.25□□□□□ -0.61
HSPG2-202ENST00000374676 TRNAU1APQ9NX07 287 aaKnown RBP11.25□□□□□ -0.61
HSPG2-202ENST00000374676 ATXN10Q9UBB4 475 aa11.25□□□□□ -0.61
HSPG2-202ENST00000374676 CRLS1Q9UJA2 301 aa11.25□□□□□ -0.61
HSPG2-202ENST00000374676 TMEM98Q9Y2Y6 226 aa11.25□□□□□ -0.61
HSPG2-202ENST00000374676 MAD1L1Q9Y6D9 718 aa11.25□□□□□ -0.61
HSPG2-202ENST00000374676 TEX264Q9Y6I9 313 aa11.25□□□□□ -0.61
HSPG2-202ENST00000374676 RPS6KL1Q9Y6S9 549 aa11.25□□□□□ -0.61
HSPG2-202ENST00000374676 FAM169AQ9Y6X4 670 aa11.25□□□□□ -0.61
HSPG2-202ENST00000374676 IGLV3-16A0A075B6K0 115 aa11.24□□□□□ -0.61
HSPG2-202ENST00000374676 ZCWPW2A0A1B0GU75 182 aa11.24□□□□□ -0.61
HSPG2-202ENST00000374676 ESYT3A0FGR9 886 aa11.24□□□□□ -0.61
HSPG2-202ENST00000374676 PRSS38A1L453 326 aa11.24□□□□□ -0.61
HSPG2-202ENST00000374676 C4orf47A7E2U8 309 aa11.24□□□□□ -0.61
HSPG2-202ENST00000374676 CHUKO15111 745 aa11.24□□□□□ -0.61
HSPG2-202ENST00000374676 GPR39O43194 453 aa11.24□□□□□ -0.61
HSPG2-202ENST00000374676 GDF9O60383 454 aa11.24□□□□□ -0.61
HSPG2-202ENST00000374676 DNAJC6O75061 913 aa11.24□□□□□ -0.61
HSPG2-202ENST00000374676 CDK14O94921 469 aa11.24□□□□□ -0.61
HSPG2-202ENST00000374676 VAPBO95292 243 aa11.24□□□□□ -0.61
HSPG2-202ENST00000374676 EPHA8P29322 1005 aaPredicted RBP11.24□□□□□ -0.61
HSPG2-202ENST00000374676 PPARGP37231 505 aaPredicted RBP11.24□□□□□ -0.61
HSPG2-202ENST00000374676 ELK3P41970 407 aa11.24□□□□□ -0.61
HSPG2-202ENST00000374676 ARCN1P48444 511 aaKnown RBP11.24□□□□□ -0.61
HSPG2-202ENST00000374676 POLD2P49005 469 aa11.24□□□□□ -0.61
HSPG2-202ENST00000374676 BNIP3Q12983 259 aa11.24□□□□□ -0.61
HSPG2-202ENST00000374676 PDIA2Q13087 525 aaKnown RBP11.24□□□□□ -0.61
HSPG2-202ENST00000374676 ITIH4Q14624 930 aa11.24□□□□□ -0.61
HSPG2-202ENST00000374676 FASTKD1Q53R41 847 aaKnown RBP11.24□□□□□ -0.61
HSPG2-202ENST00000374676 ZNF542PQ5EBM4 170 aa11.24□□□□□ -0.61
HSPG2-202ENST00000374676 SPANXN3Q5MJ09 141 aa11.24□□□□□ -0.61
HSPG2-202ENST00000374676 STPG1Q5TH74 334 aa11.24□□□□□ -0.61
HSPG2-202ENST00000374676 LYPLAL1Q5VWZ2 237 aa11.24□□□□□ -0.61
HSPG2-202ENST00000374676 PSAPL1Q6NUJ1 521 aa11.24□□□□□ -0.61
HSPG2-202ENST00000374676 CERS6Q6ZMG9 384 aa11.24□□□□□ -0.61
HSPG2-202ENST00000374676 CENPUQ71F23 418 aa11.24□□□□□ -0.61
HSPG2-202ENST00000374676 TAS2R42Q7RTR8 314 aa11.24□□□□□ -0.61
HSPG2-202ENST00000374676 KANSL1Q7Z3B3 1105 aa11.24□□□□□ -0.61
HSPG2-202ENST00000374676 SERPINA9Q86WD7 417 aa11.24□□□□□ -0.61
HSPG2-202ENST00000374676 IGDCC3Q8IVU1 814 aa11.24□□□□□ -0.61
HSPG2-202ENST00000374676 PIANPQ8IYJ0 282 aa11.24□□□□□ -0.61
HSPG2-202ENST00000374676 PHACTR4Q8IZ21 702 aa11.24□□□□□ -0.61
HSPG2-202ENST00000374676 FSTL5Q8N475 847 aaPredicted RBP11.24□□□□□ -0.61
HSPG2-202ENST00000374676 LRRN4CLQ8ND94 238 aa11.24□□□□□ -0.61
HSPG2-202ENST00000374676 OR2I1PQ8NGU4 316 aa11.24□□□□□ -0.61
HSPG2-202ENST00000374676 GDAP1Q8TB36 358 aa11.24□□□□□ -0.61
HSPG2-202ENST00000374676 SAP25Q8TEE9 199 aa11.24□□□□□ -0.61
HSPG2-202ENST00000374676 ZNF669Q96BR6 464 aaPredicted RBP11.24□□□□□ -0.61
HSPG2-202ENST00000374676 ZNF514Q96K75 400 aaPredicted RBP11.24□□□□□ -0.61
HSPG2-202ENST00000374676 TTC1Q99614 292 aa11.24□□□□□ -0.61
HSPG2-202ENST00000374676 COPS8Q99627 209 aa11.24□□□□□ -0.61
HSPG2-202ENST00000374676 ZCCHC2Q9C0B9 1178 aaKnown RBP11.24□□□□□ -0.61
HSPG2-202ENST00000374676 TCEAL2Q9H3H9 227 aaPredicted RBP11.24□□□□□ -0.61
HSPG2-202ENST00000374676 FAM96AQ9H5X1 160 aa11.24□□□□□ -0.61
HSPG2-202ENST00000374676 CYP4F12Q9HCS2 524 aa11.24□□□□□ -0.61
HSPG2-202ENST00000374676 MRPL40Q9NQ50 206 aaKnown RBP11.24□□□□□ -0.61
HSPG2-202ENST00000374676 TM7SF3Q9NS93 570 aa11.24□□□□□ -0.61
HSPG2-202ENST00000374676 ZDHHC3Q9NYG2 299 aa11.24□□□□□ -0.61
HSPG2-202ENST00000374676 SPASTQ9UBP0 616 aa11.24□□□□□ -0.61
HSPG2-202ENST00000374676 ZC3H7BQ9UGR2 993 aaKnown RBP11.24□□□□□ -0.61
HSPG2-202ENST00000374676 SUFUQ9UMX1 484 aa11.24□□□□□ -0.61
HSPG2-202ENST00000374676 GPR34Q9UPC5 381 aa11.24□□□□□ -0.61
HSPG2-202ENST00000374676 CSNK1G3Q9Y6M4 447 aa11.24□□□□□ -0.61
HSPG2-202ENST00000374676 OR51F1A6NGY5 319 aa11.23□□□□□ -0.61
HSPG2-202ENST00000374676 CFAP99D6REC4 459 aa11.23□□□□□ -0.61
HSPG2-202ENST00000374676 CD3EAPO15446 510 aaKnown RBP11.23□□□□□ -0.61
HSPG2-202ENST00000374676 MTX2O75431 263 aa11.23□□□□□ -0.61
HSPG2-202ENST00000374676 BANF1O75531 89 aa11.23□□□□□ -0.61
HSPG2-202ENST00000374676 SLU7O95391 586 aaKnown RBP11.23□□□□□ -0.61
HSPG2-202ENST00000374676 RALBP11234 206 aa11.23□□□□□ -0.61
HSPG2-202ENST00000374676 CTSEP14091 401 aa11.23□□□□□ -0.61
HSPG2-202ENST00000374676 ZNF8P17098 575 aaPredicted RBP11.23□□□□□ -0.61
HSPG2-202ENST00000374676 MSH3P20585 1137 aa11.23□□□□□ -0.61
HSPG2-202ENST00000374676 DGKAP23743 735 aa11.23□□□□□ -0.61
HSPG2-202ENST00000374676 ACRV1P26436 265 aa11.23□□□□□ -0.61
HSPG2-202ENST00000374676 ARNTP27540 789 aa11.23□□□□□ -0.61
HSPG2-202ENST00000374676 CDKN1CP49918 316 aaPredicted RBP11.23□□□□□ -0.61
HSPG2-202ENST00000374676 CUL1Q13616 776 aa11.23□□□□□ -0.61
HSPG2-202ENST00000374676 GTF2H3Q13889 308 aa11.23□□□□□ -0.61
HSPG2-202ENST00000374676 FRG1Q14331 258 aaKnown RBP11.23□□□□□ -0.61
HSPG2-202ENST00000374676 LONRF1Q17RB8 773 aa11.23□□□□□ -0.61
HSPG2-202ENST00000374676 KHDC1Q4VXA5 237 aaKnown RBP11.23□□□□□ -0.61
HSPG2-202ENST00000374676 PYCR3Q53H96 274 aa11.23□□□□□ -0.61
HSPG2-202ENST00000374676 AARS2Q5JTZ9 985 aaKnown RBP11.23□□□□□ -0.61
HSPG2-202ENST00000374676 ZNF648Q5T619 568 aaPredicted RBP11.23□□□□□ -0.61
HSPG2-202ENST00000374676 STEAP4Q687X5 459 aa11.23□□□□□ -0.61
HSPG2-202ENST00000374676 KCTD16Q68DU8 428 aa11.23□□□□□ -0.61
HSPG2-202ENST00000374676 NEPROQ6NW34 567 aa11.23□□□□□ -0.61
HSPG2-202ENST00000374676 DOK6Q6PKX4 331 aa11.23□□□□□ -0.61
HSPG2-202ENST00000374676 CEP128Q6ZU80 1094 aa11.23□□□□□ -0.61
HSPG2-202ENST00000374676 RD3Q7Z3Z2 195 aa11.23□□□□□ -0.61
HSPG2-202ENST00000374676 ALYREFQ86V81 257 aaKnown RBP11.23□□□□□ -0.61
HSPG2-202ENST00000374676 LMNTD2Q8IXW0 634 aa11.23□□□□□ -0.61
HSPG2-202ENST00000374676 IFT20Q8IY31 132 aa11.23□□□□□ -0.61
HSPG2-202ENST00000374676 KIAA2013Q8IYS2 634 aa11.23□□□□□ -0.61
HSPG2-202ENST00000374676 RBFAQ8N0V3 343 aa11.23□□□□□ -0.61
HSPG2-202ENST00000374676 SLC25A45Q8N413 288 aa11.23□□□□□ -0.61
HSPG2-202ENST00000374676 GPR150Q8NGU9 434 aa11.23□□□□□ -0.61
HSPG2-202ENST00000374676 SCG3Q8WXD2 468 aaKnown RBP11.23□□□□□ -0.61
HSPG2-202ENST00000374676 PDXPQ96GD0 296 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms