RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 TRIM54Q9BYV2 358 aa13.84□□□□□ -0.19
HMGCL-203ENST00000374490 GPR62Q9BZJ7 368 aa13.84□□□□□ -0.19
HMGCL-203ENST00000374490 FBRSL1Q9HCM7 1045 aaKnown RBP13.84□□□□□ -0.19
HMGCL-203ENST00000374490 RIC8BQ9NVN3 520 aa13.84□□□□□ -0.19
HMGCL-203ENST00000374490 PTTG2Q9NZH5 202 aa13.84□□□□□ -0.19
HMGCL-203ENST00000374490 CXXC1Q9P0U4 656 aaPredicted RBP13.84□□□□□ -0.19
HMGCL-203ENST00000374490 POLG2Q9UHN1 485 aa13.84□□□□□ -0.19
HMGCL-203ENST00000374490 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.83□□□□□ -0.2
HMGCL-203ENST00000374490 ATP6AP2A0A1C7CYW4 349 aa13.83□□□□□ -0.2
HMGCL-203ENST00000374490 ARHGAP10A1A4S6 786 aa13.83□□□□□ -0.2
HMGCL-203ENST00000374490 GRXCR2A6NFK2 248 aa13.83□□□□□ -0.2
HMGCL-203ENST00000374490 GIPC1O14908 333 aa13.83□□□□□ -0.2
HMGCL-203ENST00000374490 ECI2O75521 394 aa13.83□□□□□ -0.2
HMGCL-203ENST00000374490 ATP6AP2O75787 350 aa13.83□□□□□ -0.2
HMGCL-203ENST00000374490 SIX3O95343 332 aaPredicted RBP13.83□□□□□ -0.2
HMGCL-203ENST00000374490 GALTP07902 379 aa13.83□□□□□ -0.2
HMGCL-203ENST00000374490 RHOCP08134 193 aa13.83□□□□□ -0.2
HMGCL-203ENST00000374490 PRR35P0CG20 571 aa13.83□□□□□ -0.2
HMGCL-203ENST00000374490 UROSP10746 265 aa13.83□□□□□ -0.2
HMGCL-203ENST00000374490 FCGR1AP12314 374 aa13.83□□□□□ -0.2
HMGCL-203ENST00000374490 HGFP14210 728 aa13.83□□□□□ -0.2
HMGCL-203ENST00000374490 PKMP14618 531 aaKnown RBP13.83□□□□□ -0.2
HMGCL-203ENST00000374490 FMO4P31512 558 aa13.83□□□□□ -0.2
HMGCL-203ENST00000374490 SLC6A4P31645 630 aa13.83□□□□□ -0.2
HMGCL-203ENST00000374490 KCNQ1P51787 676 aa13.83□□□□□ -0.2
HMGCL-203ENST00000374490 NR1H2P55055 460 aa13.83□□□□□ -0.2
HMGCL-203ENST00000374490 CDKL1Q00532 357 aa13.83□□□□□ -0.2
HMGCL-203ENST00000374490 ZNF177Q13360 481 aaPredicted RBP13.83□□□□□ -0.2
HMGCL-203ENST00000374490 LSAMPQ13449 338 aa13.83□□□□□ -0.2
HMGCL-203ENST00000374490 UGT3A1Q6NUS8 523 aa13.83□□□□□ -0.2
HMGCL-203ENST00000374490 LAYNQ6UX15 382 aa13.83□□□□□ -0.2
HMGCL-203ENST00000374490 ZNF783Q6ZMS7 281 aa13.83□□□□□ -0.2
HMGCL-203ENST00000374490 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.83□□□□□ -0.2
HMGCL-203ENST00000374490 SATL1Q86VE3 508 aa13.83□□□□□ -0.2
HMGCL-203ENST00000374490 RETREG3Q86VR2 466 aa13.83□□□□□ -0.2
HMGCL-203ENST00000374490 HOMEZQ8IX15 550 aa13.83□□□□□ -0.2
HMGCL-203ENST00000374490 STK40Q8N2I9 435 aa13.83□□□□□ -0.2
HMGCL-203ENST00000374490 OR7D4Q8NG98 312 aa13.83□□□□□ -0.2
HMGCL-203ENST00000374490 OR4K2Q8NGD2 314 aa13.83□□□□□ -0.2
HMGCL-203ENST00000374490 OR56A4Q8NGH8 313 aa13.83□□□□□ -0.2
HMGCL-203ENST00000374490 OR9I1Q8NGQ6 314 aa13.83□□□□□ -0.2
HMGCL-203ENST00000374490 LRTOMTQ8WZ04 291 aa13.83□□□□□ -0.2
HMGCL-203ENST00000374490 SLCO4A1Q96BD0 722 aa13.83□□□□□ -0.2
HMGCL-203ENST00000374490 MYEOVQ96EZ4 313 aa13.83□□□□□ -0.2
HMGCL-203ENST00000374490 SPON2Q9BUD6 331 aa13.83□□□□□ -0.2
HMGCL-203ENST00000374490 NACA2Q9H009 215 aa13.83□□□□□ -0.2
HMGCL-203ENST00000374490 NKX2-4Q9H2Z4 354 aa13.83□□□□□ -0.2
HMGCL-203ENST00000374490 CWH43Q9H720 699 aa13.83□□□□□ -0.2
HMGCL-203ENST00000374490 COQ10BQ9H8M1 238 aa13.83□□□□□ -0.2
HMGCL-203ENST00000374490 CCM2LQ9NUG4 571 aaPredicted RBP13.83□□□□□ -0.2
HMGCL-203ENST00000374490 HCSTQ9UBK5 93 aa13.83□□□□□ -0.2
HMGCL-203ENST00000374490 TRMT6Q9UJA5 497 aaKnown RBP13.83□□□□□ -0.2
HMGCL-203ENST00000374490 AGO1Q9UL18 857 aaKnown RBP13.83□□□□□ -0.2
HMGCL-203ENST00000374490 DMTF1Q9Y222 760 aa13.83□□□□□ -0.2
HMGCL-203ENST00000374490 SPO11Q9Y5K1 396 aa13.83□□□□□ -0.2
HMGCL-203ENST00000374490 SNX13Q9Y5W8 968 aa13.83□□□□□ -0.2
HMGCL-203ENST00000374490 ZFP37Q9Y6Q3 630 aaPredicted RBP13.83□□□□□ -0.2
HMGCL-203ENST00000374490 ANKRD36A6QL64 1941 aa13.83□□□□□ -0.2
HMGCL-203ENST00000374490 ABHD14A-ACY1A0A1B0GW23 586 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 KANSL1LA0AUZ9 987 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 EME2A4GXA9 379 aaPredicted RBP13.82□□□□□ -0.2
HMGCL-203ENST00000374490 H3BNC9 293 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 H7C0S8 307 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 TNFRSF10AO00220 468 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 VNN2O95498 520 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 ESRRBO95718 433 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 MT-CO1P00395 513 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 TFAP2AP05549 437 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 C7P10643 843 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 ARSAP15289 507 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 IL10P22301 178 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 TUFMP49411 452 aaKnown RBP13.82□□□□□ -0.2
HMGCL-203ENST00000374490 ALDH7A1P49419 539 aaKnown RBP13.82□□□□□ -0.2
HMGCL-203ENST00000374490 KCNK10P57789 538 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 PTPRCAPQ14761 206 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 PDCD4Q53EL6 469 aaKnown RBP13.82□□□□□ -0.2
HMGCL-203ENST00000374490 HECTD3Q5T447 861 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 PPP4R4Q6NUP7 873 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 BLOC1S3Q6QNY0 202 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 DTNBP1Q96EV8 351 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 SLC45A3Q96JT2 553 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 GPR21Q99679 349 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 TTPALQ9BTX7 342 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 AIG1Q9NVV5 245 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 ACTR3BQ9P1U1 418 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 MAP10Q9P2G4 905 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 CDH23Q9H251 3354 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 A0A0D9SEW6 157 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 A0A1B0GVM2 712 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 A0A1W2PP18 115 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 ZNF839A8K0R7 811 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 ZBBXA8MT70 800 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 NT5C1B-RDH14C9J2C7 533 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 SNX2O60749 519 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 EFCAB14O75071 495 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 GJB3O75712 270 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 NPPAP01160 153 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 GPIP06744 558 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 PIRTP0C851 137 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 CAPN3P20807 821 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms