RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 SLC30A1Q9Y6M5 507 aa13.61□□□□□ -0.23
CXCL12-202ENST00000374426 A0A087X0T9 212 aa13.6□□□□□ -0.23
CXCL12-202ENST00000374426 PRR19A6NJB7 356 aa13.6□□□□□ -0.23
CXCL12-202ENST00000374426 FAM228BP0C875 321 aa13.6□□□□□ -0.23
CXCL12-202ENST00000374426 TYRP1P17643 537 aa13.6□□□□□ -0.23
CXCL12-202ENST00000374426 XRCC1P18887 633 aaPredicted RBP13.6□□□□□ -0.23
CXCL12-202ENST00000374426 CD86P42081 329 aa13.6□□□□□ -0.23
CXCL12-202ENST00000374426 SH3BP2P78314 561 aa13.6□□□□□ -0.23
CXCL12-202ENST00000374426 FOXM1Q08050 763 aa13.6□□□□□ -0.23
CXCL12-202ENST00000374426 NR1I3Q14994 352 aa13.6□□□□□ -0.23
CXCL12-202ENST00000374426 HADHQ16836 314 aaKnown RBP13.6□□□□□ -0.23
CXCL12-202ENST00000374426 TMEM26Q6ZUK4 368 aa13.6□□□□□ -0.23
CXCL12-202ENST00000374426 PQLC3Q8N755 202 aa13.6□□□□□ -0.23
CXCL12-202ENST00000374426 CNTD1Q8N815 330 aa13.6□□□□□ -0.23
CXCL12-202ENST00000374426 KCTD6Q8NC69 237 aa13.6□□□□□ -0.23
CXCL12-202ENST00000374426 GPR26Q8NDV2 337 aa13.6□□□□□ -0.23
CXCL12-202ENST00000374426 FAF2Q96CS3 445 aa13.6□□□□□ -0.23
CXCL12-202ENST00000374426 HDAC11Q96DB2 347 aa13.6□□□□□ -0.23
CXCL12-202ENST00000374426 OSGEPL1Q9H4B0 414 aa13.6□□□□□ -0.23
CXCL12-202ENST00000374426 SLC23A2Q9UGH3 650 aa13.6□□□□□ -0.23
CXCL12-202ENST00000374426 PLAAQ9Y263 795 aa13.6□□□□□ -0.23
CXCL12-202ENST00000374426 KCNMB2Q9Y691 235 aa13.6□□□□□ -0.23
CXCL12-202ENST00000374426 BZW2Q9Y6E2 419 aaKnown RBP13.6□□□□□ -0.23
CXCL12-202ENST00000374426 SMTNL1A8MU46 457 aa13.59□□□□□ -0.23
CXCL12-202ENST00000374426 K7EM74 188 aa13.59□□□□□ -0.23
CXCL12-202ENST00000374426 KCNK1O00180 336 aa13.59□□□□□ -0.23
CXCL12-202ENST00000374426 CHUKO15111 745 aa13.59□□□□□ -0.23
CXCL12-202ENST00000374426 UBXN7O94888 489 aa13.59□□□□□ -0.23
CXCL12-202ENST00000374426 SLC25A14O95258 325 aaPredicted RBP13.59□□□□□ -0.23
CXCL12-202ENST00000374426 JCHAINP01591 159 aa13.59□□□□□ -0.23
CXCL12-202ENST00000374426 FURINP09958 794 aa13.59□□□□□ -0.23
CXCL12-202ENST00000374426 MX2P20592 715 aa13.59□□□□□ -0.23
CXCL12-202ENST00000374426 DLSTP36957 453 aa13.59□□□□□ -0.23
CXCL12-202ENST00000374426 SLC19A1P41440 591 aa13.59□□□□□ -0.23
CXCL12-202ENST00000374426 NOP2P46087 812 aaKnown RBP13.59□□□□□ -0.23
CXCL12-202ENST00000374426 LEPRP48357 1165 aaKnown RBP13.59□□□□□ -0.23
CXCL12-202ENST00000374426 TAS2R40P59535 323 aa13.59□□□□□ -0.23
CXCL12-202ENST00000374426 ZBTB17Q13105 803 aa13.59□□□□□ -0.23
CXCL12-202ENST00000374426 SEPT6Q14141 434 aa13.59□□□□□ -0.23
CXCL12-202ENST00000374426 GALNT3Q14435 633 aa13.59□□□□□ -0.23
CXCL12-202ENST00000374426 PDK2Q15119 407 aa13.59□□□□□ -0.23
CXCL12-202ENST00000374426 ZNF569Q5MCW4 686 aa13.59□□□□□ -0.23
CXCL12-202ENST00000374426 FAM182AQ5T1J6 154 aa13.59□□□□□ -0.23
CXCL12-202ENST00000374426 ALS2CLQ60I27 953 aa13.59□□□□□ -0.23
CXCL12-202ENST00000374426 CRTC3Q6UUV7 619 aa13.59□□□□□ -0.23
CXCL12-202ENST00000374426 C6orf15Q6UXA7 325 aaPredicted RBP13.59□□□□□ -0.23
CXCL12-202ENST00000374426 ADGRG6Q86SQ4 1221 aa13.59□□□□□ -0.23
CXCL12-202ENST00000374426 CCDC13Q8IYE1 715 aa13.59□□□□□ -0.23
CXCL12-202ENST00000374426 GALNT6Q8NCL4 622 aa13.59□□□□□ -0.23
CXCL12-202ENST00000374426 SYN2Q92777 582 aaPredicted RBP13.59□□□□□ -0.23
CXCL12-202ENST00000374426 TGM7Q96PF1 710 aa13.59□□□□□ -0.23
CXCL12-202ENST00000374426 TRIB3Q96RU7 358 aa13.59□□□□□ -0.23
CXCL12-202ENST00000374426 SPATA16Q9BXB7 569 aa13.59□□□□□ -0.23
CXCL12-202ENST00000374426 ADGRE3Q9BY15 652 aa13.59□□□□□ -0.23
CXCL12-202ENST00000374426 ZFYVE1Q9HBF4 777 aa13.59□□□□□ -0.23
CXCL12-202ENST00000374426 TRIM39Q9HCM9 518 aa13.59□□□□□ -0.23
CXCL12-202ENST00000374426 TMEM63CQ9P1W3 806 aa13.59□□□□□ -0.23
CXCL12-202ENST00000374426 ZNF624Q9P2J8 865 aaPredicted RBP13.59□□□□□ -0.23
CXCL12-202ENST00000374426 CROTQ9UKG9 612 aa13.59□□□□□ -0.23
CXCL12-202ENST00000374426 TP53TG5Q9Y2B4 290 aa13.59□□□□□ -0.23
CXCL12-202ENST00000374426 KCTD3Q9Y597 815 aa13.59□□□□□ -0.23
CXCL12-202ENST00000374426 A0A1W2PQJ5 194 aa13.58□□□□□ -0.24
CXCL12-202ENST00000374426 GPR89AB7ZAQ6 455 aa13.58□□□□□ -0.24
CXCL12-202ENST00000374426 TOX3O15405 576 aaPredicted RBP13.58□□□□□ -0.24
CXCL12-202ENST00000374426 MTA2O94776 668 aa13.58□□□□□ -0.24
CXCL12-202ENST00000374426 MBD3O95983 291 aa13.58□□□□□ -0.24
CXCL12-202ENST00000374426 VIPP01282 170 aa13.58□□□□□ -0.24
CXCL12-202ENST00000374426 SERPING1P05155 500 aa13.58□□□□□ -0.24
CXCL12-202ENST00000374426 PIRTP0C851 137 aa13.58□□□□□ -0.24
CXCL12-202ENST00000374426 GPR89BP0CG08 455 aa13.58□□□□□ -0.24
CXCL12-202ENST00000374426 GP1BBP13224 206 aa13.58□□□□□ -0.24
CXCL12-202ENST00000374426 BRAFP15056 766 aa13.58□□□□□ -0.24
CXCL12-202ENST00000374426 NR1D1P20393 614 aa13.58□□□□□ -0.24
CXCL12-202ENST00000374426 SEPHS1P49903 392 aa13.58□□□□□ -0.24
CXCL12-202ENST00000374426 DCDC1P59894 354 aa13.58□□□□□ -0.24
CXCL12-202ENST00000374426 KLRB1Q12918 225 aa13.58□□□□□ -0.24
CXCL12-202ENST00000374426 IL11RAQ14626 422 aa13.58□□□□□ -0.24
CXCL12-202ENST00000374426 INSCQ1MX18 579 aa13.58□□□□□ -0.24
CXCL12-202ENST00000374426 PLA2G4EQ3MJ16 856 aa13.58□□□□□ -0.24
CXCL12-202ENST00000374426 ALKBH5Q6P6C2 394 aaKnown RBP13.58□□□□□ -0.24
CXCL12-202ENST00000374426 ZNF547Q8IVP9 402 aa13.58□□□□□ -0.24
CXCL12-202ENST00000374426 CCNYQ8ND76 341 aa13.58□□□□□ -0.24
CXCL12-202ENST00000374426 GLYATL1Q969I3 302 aa13.58□□□□□ -0.24
CXCL12-202ENST00000374426 MIB2Q96AX9 1013 aa13.58□□□□□ -0.24
CXCL12-202ENST00000374426 OR6C1Q96RD1 312 aa13.58□□□□□ -0.24
CXCL12-202ENST00000374426 ZSCAN5AQ9BUG6 496 aa13.58□□□□□ -0.24
CXCL12-202ENST00000374426 BRD8Q9H0E9 1235 aa13.58□□□□□ -0.24
CXCL12-202ENST00000374426 ZNF768Q9H5H4 540 aaKnown RBP13.58□□□□□ -0.24
CXCL12-202ENST00000374426 NFKBIL1Q9UBC1 381 aaPredicted RBP13.58□□□□□ -0.24
CXCL12-202ENST00000374426 SHOC2Q9UQ13 582 aa13.58□□□□□ -0.24
CXCL12-202ENST00000374426 MAN2B2Q9Y2E5 1009 aa13.58□□□□□ -0.24
CXCL12-202ENST00000374426 PCDHB3Q9Y5E6 796 aa13.58□□□□□ -0.24
CXCL12-202ENST00000374426 ICE1Q9Y2F5 2266 aa13.57□□□□□ -0.24
CXCL12-202ENST00000374426 CENPEQ02224 2701 aa13.57□□□□□ -0.24
CXCL12-202ENST00000374426 KIF1CO43896 1103 aaKnown RBP13.57□□□□□ -0.24
CXCL12-202ENST00000374426 MTX2O75431 263 aa13.57□□□□□ -0.24
CXCL12-202ENST00000374426 KIAA0754O94854 1291 aa13.57□□□□□ -0.24
CXCL12-202ENST00000374426 PROSCO94903 275 aa13.57□□□□□ -0.24
CXCL12-202ENST00000374426 NDUFA10O95299 355 aa13.57□□□□□ -0.24
CXCL12-202ENST00000374426 SERPINC1P01008 464 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms