RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 OR52B6Q8NGF0 335 aa15.84■□□□□ 0.13
CNKSR1-202ENST00000374253 SLC22A17Q8WUG5 538 aa15.84■□□□□ 0.13
CNKSR1-202ENST00000374253 HGH1Q9BTY7 390 aa15.84■□□□□ 0.13
CNKSR1-202ENST00000374253 C1orf50Q9BV19 199 aa15.84■□□□□ 0.13
CNKSR1-202ENST00000374253 SH3BP1Q9Y3L3 701 aa15.84■□□□□ 0.13
CNKSR1-202ENST00000374253 PRSS21Q9Y6M0 314 aa15.84■□□□□ 0.13
CNKSR1-202ENST00000374253 PLXNA4Q9HCM2 1894 aa15.84■□□□□ 0.13
CNKSR1-202ENST00000374253 ACOT8O14734 319 aa15.84■□□□□ 0.13
CNKSR1-202ENST00000374253 SNX2O60749 519 aa15.84■□□□□ 0.13
CNKSR1-202ENST00000374253 PGLSO95336 258 aa15.84■□□□□ 0.13
CNKSR1-202ENST00000374253 GUCA1CO95843 209 aa15.84■□□□□ 0.13
CNKSR1-202ENST00000374253 PENKP01210 267 aaPredicted RBP15.84■□□□□ 0.13
CNKSR1-202ENST00000374253 GPX3P22352 226 aa15.84■□□□□ 0.13
CNKSR1-202ENST00000374253 CES1P23141 567 aa15.84■□□□□ 0.13
CNKSR1-202ENST00000374253 ATP6V0D1P61421 351 aa15.84■□□□□ 0.13
CNKSR1-202ENST00000374253 WDR5P61964 334 aaKnown RBP15.84■□□□□ 0.13
CNKSR1-202ENST00000374253 MRPS35P82673 323 aaKnown RBP15.84■□□□□ 0.13
CNKSR1-202ENST00000374253 CAPRIN1Q14444 709 aaKnown RBP15.84■□□□□ 0.13
CNKSR1-202ENST00000374253 HABP4Q5JVS0 413 aaKnown RBP15.84■□□□□ 0.13
CNKSR1-202ENST00000374253 DDX53Q86TM3 631 aaKnown RBP15.84■□□□□ 0.13
CNKSR1-202ENST00000374253 GPSM1Q86YR5 675 aa15.84■□□□□ 0.13
CNKSR1-202ENST00000374253 CMTM8Q8IZV2 173 aa15.84■□□□□ 0.13
CNKSR1-202ENST00000374253 NKAPQ8N5F7 415 aaKnown RBP15.84■□□□□ 0.13
CNKSR1-202ENST00000374253 PHC3Q8NDX5 983 aa15.84■□□□□ 0.13
CNKSR1-202ENST00000374253 STON2Q8WXE9 905 aa15.84■□□□□ 0.13
CNKSR1-202ENST00000374253 ATP6V1E2Q96A05 226 aa15.84■□□□□ 0.13
CNKSR1-202ENST00000374253 C17orf80Q9BSJ5 609 aa15.84■□□□□ 0.13
CNKSR1-202ENST00000374253 RC3H2Q9HBD1 1191 aaKnown RBP15.84■□□□□ 0.13
CNKSR1-202ENST00000374253 HCFC1R1Q9NWW0 138 aa15.84■□□□□ 0.13
CNKSR1-202ENST00000374253 CCL26Q9Y258 94 aa15.84■□□□□ 0.13
CNKSR1-202ENST00000374253 EME2A4GXA9 379 aaPredicted RBP15.83■□□□□ 0.12
CNKSR1-202ENST00000374253 A6NHS1 94 aa15.83■□□□□ 0.12
CNKSR1-202ENST00000374253 LINGO3P0C6S8 592 aa15.83■□□□□ 0.12
CNKSR1-202ENST00000374253 SLC7A2P52569 658 aa15.83■□□□□ 0.12
CNKSR1-202ENST00000374253 DGKKQ5KSL6 1271 aa15.83■□□□□ 0.12
CNKSR1-202ENST00000374253 SERPINA9Q86WD7 417 aa15.83■□□□□ 0.12
CNKSR1-202ENST00000374253 PHYKPLQ8IUZ5 450 aa15.83■□□□□ 0.12
CNKSR1-202ENST00000374253 CDYL2Q8N8U2 506 aa15.83■□□□□ 0.12
CNKSR1-202ENST00000374253 DCAF4L2Q8NA75 395 aa15.83■□□□□ 0.12
CNKSR1-202ENST00000374253 CORO1BQ9BR76 489 aa15.83■□□□□ 0.12
CNKSR1-202ENST00000374253 CIPCQ9C0C6 399 aa15.83■□□□□ 0.12
CNKSR1-202ENST00000374253 RETREG1Q9H6L5 497 aa15.83■□□□□ 0.12
CNKSR1-202ENST00000374253 ASB8Q9H765 288 aa15.83■□□□□ 0.12
CNKSR1-202ENST00000374253 PCTPQ9UKL6 214 aa15.83■□□□□ 0.12
CNKSR1-202ENST00000374253 INTS6Q9UL03 887 aaKnown RBP15.83■□□□□ 0.12
CNKSR1-202ENST00000374253 PSMD13Q9UNM6 376 aa15.83■□□□□ 0.12
CNKSR1-202ENST00000374253 TRIM16O95361 564 aa15.83■□□□□ 0.12
CNKSR1-202ENST00000374253 CAPN3P20807 821 aa15.83■□□□□ 0.12
CNKSR1-202ENST00000374253 HNF1BP35680 557 aa15.83■□□□□ 0.12
CNKSR1-202ENST00000374253 HMGCLP35914 325 aa15.83■□□□□ 0.12
CNKSR1-202ENST00000374253 CLCN7P51798 805 aa15.83■□□□□ 0.12
CNKSR1-202ENST00000374253 BCL2L1Q07817 233 aa15.83■□□□□ 0.12
CNKSR1-202ENST00000374253 PTRHD1Q6GMV3 140 aaKnown RBP15.83■□□□□ 0.12
CNKSR1-202ENST00000374253 NUDT8Q8WV74 236 aa15.83■□□□□ 0.12
CNKSR1-202ENST00000374253 MRPS31Q92665 395 aaKnown RBP15.83■□□□□ 0.12
CNKSR1-202ENST00000374253 TEX37Q96LM6 180 aa15.83■□□□□ 0.12
CNKSR1-202ENST00000374253 TUBGCP5Q96RT8 1024 aa15.83■□□□□ 0.12
CNKSR1-202ENST00000374253 PKP2Q99959 881 aa15.83■□□□□ 0.12
CNKSR1-202ENST00000374253 SLC25A23Q9BV35 468 aa15.83■□□□□ 0.12
CNKSR1-202ENST00000374253 C2orf49Q9BVC5 232 aaPredicted RBP15.83■□□□□ 0.12
CNKSR1-202ENST00000374253 SEMA6AQ9H2E6 1030 aa15.83■□□□□ 0.12
CNKSR1-202ENST00000374253 ZFYVE1Q9HBF4 777 aa15.83■□□□□ 0.12
CNKSR1-202ENST00000374253 HSFX1Q9UBD0 423 aa15.83■□□□□ 0.12
CNKSR1-202ENST00000374253 SYCE1LA8MT33 242 aa15.82■□□□□ 0.12
CNKSR1-202ENST00000374253 TRIM38O00635 465 aa15.82■□□□□ 0.12
CNKSR1-202ENST00000374253 GAPDHSO14556 408 aaPredicted RBP15.82■□□□□ 0.12
CNKSR1-202ENST00000374253 CCL16O15467 120 aa15.82■□□□□ 0.12
CNKSR1-202ENST00000374253 BCAS2O75934 225 aaPredicted RBP15.82■□□□□ 0.12
CNKSR1-202ENST00000374253 OR4F21O95013 312 aa15.82■□□□□ 0.12
CNKSR1-202ENST00000374253 FGF4P08620 206 aa15.82■□□□□ 0.12
CNKSR1-202ENST00000374253 RPS17P08708 135 aaKnown RBP15.82■□□□□ 0.12
CNKSR1-202ENST00000374253 CLTBP09497 229 aa15.82■□□□□ 0.12
CNKSR1-202ENST00000374253 LAG3P18627 525 aa15.82■□□□□ 0.12
CNKSR1-202ENST00000374253 RPS6KA2Q15349 733 aa15.82■□□□□ 0.12
CNKSR1-202ENST00000374253 MAPRE2Q15555 327 aa15.82■□□□□ 0.12
CNKSR1-202ENST00000374253 TGFBIQ15582 683 aa15.82■□□□□ 0.12
CNKSR1-202ENST00000374253 PLA2G4EQ3MJ16 856 aa15.82■□□□□ 0.12
CNKSR1-202ENST00000374253 IL23RQ5VWK5 629 aa15.82■□□□□ 0.12
CNKSR1-202ENST00000374253 FAM110BQ8TC76 370 aa15.82■□□□□ 0.12
CNKSR1-202ENST00000374253 GATA6Q92908 595 aa15.82■□□□□ 0.12
CNKSR1-202ENST00000374253 VPS33AQ96AX1 596 aa15.82■□□□□ 0.12
CNKSR1-202ENST00000374253 LSM7Q9UK45 103 aaKnown RBP15.82■□□□□ 0.12
CNKSR1-202ENST00000374253 PIKFYVEQ9Y2I7 2098 aa15.82■□□□□ 0.12
CNKSR1-202ENST00000374253 KATNA1O75449 491 aa15.82■□□□□ 0.12
CNKSR1-202ENST00000374253 FGF18O76093 207 aa15.82■□□□□ 0.12
CNKSR1-202ENST00000374253 PTGER3P43115 390 aa15.82■□□□□ 0.12
CNKSR1-202ENST00000374253 PPP3CCP48454 512 aa15.82■□□□□ 0.12
CNKSR1-202ENST00000374253 CREB5Q02930 508 aa15.82■□□□□ 0.12
CNKSR1-202ENST00000374253 CACNG1Q06432 222 aa15.82■□□□□ 0.12
CNKSR1-202ENST00000374253 LRRC26Q2I0M4 334 aa15.82■□□□□ 0.12
CNKSR1-202ENST00000374253 RNF220Q5VTB9 566 aa15.82■□□□□ 0.12
CNKSR1-202ENST00000374253 RETSATQ6NUM9 610 aa15.82■□□□□ 0.12
CNKSR1-202ENST00000374253 RFLNAQ6ZTI6 216 aa15.82■□□□□ 0.12
CNKSR1-202ENST00000374253 ITIH5Q86UX2 942 aa15.82■□□□□ 0.12
CNKSR1-202ENST00000374253 GALNT4Q8N4A0 578 aa15.82■□□□□ 0.12
CNKSR1-202ENST00000374253 FIBCD1Q8N539 461 aa15.82■□□□□ 0.12
CNKSR1-202ENST00000374253 OR2T11Q8NH01 316 aa15.82■□□□□ 0.12
CNKSR1-202ENST00000374253 KCNJ9Q92806 393 aa15.82■□□□□ 0.12
CNKSR1-202ENST00000374253 LRGUKQ96M69 825 aa15.82■□□□□ 0.12
CNKSR1-202ENST00000374253 TOX2Q96NM4 488 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms