RNA–Protein interactions for RNA: ENST00000372972.6

CSTF2-201, Transcript of cleavage stimulation factor subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF2, Length 1,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-201ENST00000372972 PRAMEF1O95521 474 aa13.27□□□□□ -0.28
CSTF2-201ENST00000372972 ARSAP15289 507 aa13.27□□□□□ -0.28
CSTF2-201ENST00000372972 ZNF7P17097 686 aaPredicted RBP13.27□□□□□ -0.28
CSTF2-201ENST00000372972 SERPINA4P29622 427 aa13.27□□□□□ -0.28
CSTF2-201ENST00000372972 GKP32189 559 aa13.27□□□□□ -0.28
CSTF2-201ENST00000372972 IRS1P35568 1242 aa13.27□□□□□ -0.28
CSTF2-201ENST00000372972 CAMK1Q14012 370 aa13.27□□□□□ -0.28
CSTF2-201ENST00000372972 CDKN3Q16667 212 aa13.27□□□□□ -0.28
CSTF2-201ENST00000372972 ZNF423Q2M1K9 1284 aa13.27□□□□□ -0.28
CSTF2-201ENST00000372972 EML3Q32P44 896 aa13.27□□□□□ -0.28
CSTF2-201ENST00000372972 AGKQ53H12 422 aa13.27□□□□□ -0.28
CSTF2-201ENST00000372972 PIGGQ5H8A4 983 aa13.27□□□□□ -0.28
CSTF2-201ENST00000372972 KANK2Q63ZY3 851 aa13.27□□□□□ -0.28
CSTF2-201ENST00000372972 FAM151BQ6UXP7 276 aa13.27□□□□□ -0.28
CSTF2-201ENST00000372972 CPNE9Q8IYJ1 553 aa13.27□□□□□ -0.28
CSTF2-201ENST00000372972 CMTM8Q8IZV2 173 aa13.27□□□□□ -0.28
CSTF2-201ENST00000372972 OR2AP1Q8NGE2 309 aa13.27□□□□□ -0.28
CSTF2-201ENST00000372972 HMGCLL1Q8TB92 370 aa13.27□□□□□ -0.28
CSTF2-201ENST00000372972 GRIN3AQ8TCU5 1115 aa13.27□□□□□ -0.28
CSTF2-201ENST00000372972 TWIST2Q8WVJ9 160 aa13.27□□□□□ -0.28
CSTF2-201ENST00000372972 PDLIM5Q96HC4 596 aaKnown RBP13.27□□□□□ -0.28
CSTF2-201ENST00000372972 LMLNQ96KR4 655 aa13.27□□□□□ -0.28
CSTF2-201ENST00000372972 SARS2Q9NP81 518 aaKnown RBP13.27□□□□□ -0.28
CSTF2-201ENST00000372972 HCFC1R1Q9NWW0 138 aa13.27□□□□□ -0.28
CSTF2-201ENST00000372972 MTCL1Q9Y4B5 1905 aaKnown RBP13.27□□□□□ -0.29
CSTF2-201ENST00000372972 NCF1BA6NI72 391 aaPredicted RBP13.27□□□□□ -0.29
CSTF2-201ENST00000372972 IQCF5A8MTL0 148 aa13.27□□□□□ -0.29
CSTF2-201ENST00000372972 NCF1CA8MVU1 366 aaPredicted RBP13.27□□□□□ -0.29
CSTF2-201ENST00000372972 C5orf67F2Z3F1 127 aa13.27□□□□□ -0.29
CSTF2-201ENST00000372972 GPR39O43194 453 aa13.27□□□□□ -0.29
CSTF2-201ENST00000372972 CLDN7O95471 211 aa13.27□□□□□ -0.29
CSTF2-201ENST00000372972 SNRPB2P08579 225 aaKnown RBP13.27□□□□□ -0.29
CSTF2-201ENST00000372972 RPS17P08708 135 aaKnown RBP13.27□□□□□ -0.29
CSTF2-201ENST00000372972 NCF1P14598 390 aaPredicted RBP13.27□□□□□ -0.29
CSTF2-201ENST00000372972 RPS3P23396 243 aaKnown RBP eCLIP13.27□□□□□ -0.29
CSTF2-201ENST00000372972 FOXA1P55317 472 aa13.27□□□□□ -0.29
CSTF2-201ENST00000372972 SNRPD1P62314 119 aaKnown RBP13.27□□□□□ -0.29
CSTF2-201ENST00000372972 UBE3AQ05086 875 aa13.27□□□□□ -0.29
CSTF2-201ENST00000372972 PITRM1Q5JRX3 1037 aa13.27□□□□□ -0.29
CSTF2-201ENST00000372972 TRIM68Q6AZZ1 485 aa13.27□□□□□ -0.29
CSTF2-201ENST00000372972 PTRHD1Q6GMV3 140 aaKnown RBP13.27□□□□□ -0.29
CSTF2-201ENST00000372972 FAM109BQ6ICB4 259 aaPredicted RBP13.27□□□□□ -0.29
CSTF2-201ENST00000372972 SNX20Q7Z614 316 aa13.27□□□□□ -0.29
CSTF2-201ENST00000372972 KBTBD6Q86V97 674 aa13.27□□□□□ -0.29
CSTF2-201ENST00000372972 SERPINA9Q86WD7 417 aa13.27□□□□□ -0.29
CSTF2-201ENST00000372972 ISG20Q96AZ6 181 aaKnown RBP13.27□□□□□ -0.29
CSTF2-201ENST00000372972 RPL10LQ96L21 214 aaKnown RBP13.27□□□□□ -0.29
CSTF2-201ENST00000372972 HTATIP2Q9BUP3 242 aa13.27□□□□□ -0.29
CSTF2-201ENST00000372972 CLPBQ9H078 707 aa13.27□□□□□ -0.29
CSTF2-201ENST00000372972 ASB8Q9H765 288 aa13.27□□□□□ -0.29
CSTF2-201ENST00000372972 IL26Q9NPH9 171 aa13.27□□□□□ -0.29
CSTF2-201ENST00000372972 SEMA4BQ9NPR2 832 aaPredicted RBP13.27□□□□□ -0.29
CSTF2-201ENST00000372972 CCDC167Q9P0B6 97 aa13.27□□□□□ -0.29
CSTF2-201ENST00000372972 BCAP29Q9UHQ4 241 aa13.27□□□□□ -0.29
CSTF2-201ENST00000372972 LAMA2P24043 3122 aaKnown RBP13.26□□□□□ -0.29
CSTF2-201ENST00000372972 CAPN8A6NHC0 703 aa13.26□□□□□ -0.29
CSTF2-201ENST00000372972 GAPDHSO14556 408 aaPredicted RBP13.26□□□□□ -0.29
CSTF2-201ENST00000372972 PIP5K1BO14986 540 aa13.26□□□□□ -0.29
CSTF2-201ENST00000372972 SNX2O60749 519 aa13.26□□□□□ -0.29
CSTF2-201ENST00000372972 RFPL2O75678 378 aa13.26□□□□□ -0.29
CSTF2-201ENST00000372972 MLYCDO95822 493 aa13.26□□□□□ -0.29
CSTF2-201ENST00000372972 SRCP12931 536 aa13.26□□□□□ -0.29
CSTF2-201ENST00000372972 ITGALP20701 1170 aa13.26□□□□□ -0.29
CSTF2-201ENST00000372972 CCR2P41597 374 aa13.26□□□□□ -0.29
CSTF2-201ENST00000372972 CTSOP43234 321 aaPredicted RBP13.26□□□□□ -0.29
CSTF2-201ENST00000372972 ACADVLP49748 655 aa13.26□□□□□ -0.29
CSTF2-201ENST00000372972 HK3P52790 923 aa13.26□□□□□ -0.29
CSTF2-201ENST00000372972 STX1BP61266 288 aa13.26□□□□□ -0.29
CSTF2-201ENST00000372972 NFATC2Q13469 925 aa13.26□□□□□ -0.29
CSTF2-201ENST00000372972 MYLK3Q32MK0 819 aa13.26□□□□□ -0.29
CSTF2-201ENST00000372972 MMEL1Q495T6 779 aa13.26□□□□□ -0.29
CSTF2-201ENST00000372972 C9orf50Q5SZB4 431 aa13.26□□□□□ -0.29
CSTF2-201ENST00000372972 LYPLAL1Q5VWZ2 237 aa13.26□□□□□ -0.29
CSTF2-201ENST00000372972 DDIASQ8IXT1 998 aa13.26□□□□□ -0.29
CSTF2-201ENST00000372972 RBFAQ8N0V3 343 aa13.26□□□□□ -0.29
CSTF2-201ENST00000372972 CBARPQ8N350 705 aaPredicted RBP13.26□□□□□ -0.29
CSTF2-201ENST00000372972 HIPK4Q8NE63 616 aa13.26□□□□□ -0.29
CSTF2-201ENST00000372972 ZNF483Q8TF39 744 aaPredicted RBP13.26□□□□□ -0.29
CSTF2-201ENST00000372972 FBRSL1Q9HCM7 1045 aaKnown RBP13.26□□□□□ -0.29
CSTF2-201ENST00000372972 BATF3Q9NR55 127 aa13.26□□□□□ -0.29
CSTF2-201ENST00000372972 CD274Q9NZQ7 290 aa13.26□□□□□ -0.29
CSTF2-201ENST00000372972 PACSIN3Q9UKS6 424 aa13.26□□□□□ -0.29
CSTF2-201ENST00000372972 CCL26Q9Y258 94 aa13.26□□□□□ -0.29
CSTF2-201ENST00000372972 DOCK6Q96HP0 2047 aa13.26□□□□□ -0.29
CSTF2-201ENST00000372972 VPS4BO75351 444 aa13.25□□□□□ -0.29
CSTF2-201ENST00000372972 CRCPO75575 148 aa13.25□□□□□ -0.29
CSTF2-201ENST00000372972 FGF19O95750 216 aa13.25□□□□□ -0.29
CSTF2-201ENST00000372972 BPIP17213 487 aa13.25□□□□□ -0.29
CSTF2-201ENST00000372972 ME2P23368 584 aa13.25□□□□□ -0.29
CSTF2-201ENST00000372972 HLA-FP30511 346 aa13.25□□□□□ -0.29
CSTF2-201ENST00000372972 AGTR2P50052 363 aa13.25□□□□□ -0.29
CSTF2-201ENST00000372972 THOP1P52888 689 aa13.25□□□□□ -0.29
CSTF2-201ENST00000372972 CLNS1AP54105 237 aaKnown RBP13.25□□□□□ -0.29
CSTF2-201ENST00000372972 PKNOX1P55347 436 aa13.25□□□□□ -0.29
CSTF2-201ENST00000372972 CEACAM7Q14002 265 aa13.25□□□□□ -0.29
CSTF2-201ENST00000372972 FBXO48Q5FWF7 155 aa13.25□□□□□ -0.29
CSTF2-201ENST00000372972 FAM219BQ5XKK7 198 aa13.25□□□□□ -0.29
CSTF2-201ENST00000372972 GRAMD4Q6IC98 578 aa13.25□□□□□ -0.29
CSTF2-201ENST00000372972 KCNA7Q96RP8 456 aa13.25□□□□□ -0.29
CSTF2-201ENST00000372972 TUBGCP5Q96RT8 1024 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms