RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 HDAC11Q96DB2 347 aa11.4□□□□□ -0.58
TSPAN1-201ENST00000372003 HSPBAP1Q96EW2 488 aa11.4□□□□□ -0.58
TSPAN1-201ENST00000372003 LRRC3BQ96PB8 259 aa11.4□□□□□ -0.58
TSPAN1-201ENST00000372003 PPP1R2P1Q96PQ5 205 aa11.4□□□□□ -0.58
TSPAN1-201ENST00000372003 HOPXQ9BPY8 73 aaPredicted RBP11.4□□□□□ -0.58
TSPAN1-201ENST00000372003 C9orf16Q9BUW7 83 aa11.4□□□□□ -0.58
TSPAN1-201ENST00000372003 CAB39LQ9H9S4 337 aa11.4□□□□□ -0.58
TSPAN1-201ENST00000372003 KCNK12Q9HB15 430 aa11.4□□□□□ -0.58
TSPAN1-201ENST00000372003 IARS2Q9NSE4 1012 aaKnown RBP11.4□□□□□ -0.58
TSPAN1-201ENST00000372003 OLA1Q9NTK5 396 aaKnown RBP11.4□□□□□ -0.58
TSPAN1-201ENST00000372003 SNX13Q9Y5W8 968 aa11.4□□□□□ -0.58
TSPAN1-201ENST00000372003 C2orf16Q68DN1 1984 aa11.4□□□□□ -0.59
TSPAN1-201ENST00000372003 KCNU1A8MYU2 1149 aa11.39□□□□□ -0.59
TSPAN1-201ENST00000372003 LEFTY2O00292 366 aa11.39□□□□□ -0.59
TSPAN1-201ENST00000372003 EEF2KO00418 725 aaKnown RBP11.39□□□□□ -0.59
TSPAN1-201ENST00000372003 CD1EP15812 388 aa11.39□□□□□ -0.59
TSPAN1-201ENST00000372003 PFKLP17858 780 aa11.39□□□□□ -0.59
TSPAN1-201ENST00000372003 MSX2P35548 267 aaPredicted RBP11.39□□□□□ -0.59
TSPAN1-201ENST00000372003 SULT1E1P49888 294 aa11.39□□□□□ -0.59
TSPAN1-201ENST00000372003 ENTPD1P49961 510 aa11.39□□□□□ -0.59
TSPAN1-201ENST00000372003 ATXN1P54253 815 aaKnown RBP11.39□□□□□ -0.59
TSPAN1-201ENST00000372003 PRKCQQ04759 706 aa11.39□□□□□ -0.59
TSPAN1-201ENST00000372003 SCAPQ12770 1279 aa11.39□□□□□ -0.59
TSPAN1-201ENST00000372003 HTR4Q13639 388 aa11.39□□□□□ -0.59
TSPAN1-201ENST00000372003 INPP5AQ14642 412 aa11.39□□□□□ -0.59
TSPAN1-201ENST00000372003 MOGQ16653 247 aa11.39□□□□□ -0.59
TSPAN1-201ENST00000372003 MTX3Q5HYI7 312 aa11.39□□□□□ -0.59
TSPAN1-201ENST00000372003 TMEM198Q66K66 360 aa11.39□□□□□ -0.59
TSPAN1-201ENST00000372003 TTC33Q6PID6 262 aaPredicted RBP11.39□□□□□ -0.59
TSPAN1-201ENST00000372003 VITQ6UXI7 678 aa11.39□□□□□ -0.59
TSPAN1-201ENST00000372003 MTSS1LQ765P7 747 aa11.39□□□□□ -0.59
TSPAN1-201ENST00000372003 CLVS1Q8IUQ0 354 aaPredicted RBP11.39□□□□□ -0.59
TSPAN1-201ENST00000372003 MYO1HQ8N1T3 1032 aa11.39□□□□□ -0.59
TSPAN1-201ENST00000372003 DQX1Q8TE96 717 aaKnown RBP11.39□□□□□ -0.59
TSPAN1-201ENST00000372003 WBP2Q969T9 261 aa11.39□□□□□ -0.59
TSPAN1-201ENST00000372003 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.39□□□□□ -0.59
TSPAN1-201ENST00000372003 C12orf43Q96C57 262 aaKnown RBP11.39□□□□□ -0.59
TSPAN1-201ENST00000372003 MFSD3Q96ES6 412 aa11.39□□□□□ -0.59
TSPAN1-201ENST00000372003 FEM1CQ96JP0 617 aa11.39□□□□□ -0.59
TSPAN1-201ENST00000372003 GPR78Q96P69 363 aa11.39□□□□□ -0.59
TSPAN1-201ENST00000372003 SLC2A13Q96QE2 648 aa11.39□□□□□ -0.59
TSPAN1-201ENST00000372003 NPY6RQ99463 290 aa11.39□□□□□ -0.59
TSPAN1-201ENST00000372003 SLC29A1Q99808 456 aa11.39□□□□□ -0.59
TSPAN1-201ENST00000372003 TRMOQ9BU70 441 aa11.39□□□□□ -0.59
TSPAN1-201ENST00000372003 TRIM62Q9BVG3 475 aa11.39□□□□□ -0.59
TSPAN1-201ENST00000372003 TDRD1Q9BXT4 1180 aaKnown RBP11.39□□□□□ -0.59
TSPAN1-201ENST00000372003 SEPT10Q9P0V9 454 aa11.39□□□□□ -0.59
TSPAN1-201ENST00000372003 CFAP97Q9P2B7 532 aa11.39□□□□□ -0.59
TSPAN1-201ENST00000372003 GNPTGQ9UJJ9 305 aa11.39□□□□□ -0.59
TSPAN1-201ENST00000372003 B3GNT3Q9Y2A9 372 aa11.39□□□□□ -0.59
TSPAN1-201ENST00000372003 MTF2Q9Y483 593 aaPredicted RBP11.39□□□□□ -0.59
TSPAN1-201ENST00000372003 MFHAS1Q9Y4C4 1052 aa11.39□□□□□ -0.59
TSPAN1-201ENST00000372003 DOCK6Q96HP0 2047 aa11.39□□□□□ -0.59
TSPAN1-201ENST00000372003 NOTCH4Q99466 2003 aa11.39□□□□□ -0.59
TSPAN1-201ENST00000372003 PRORSD1PA6NEY8 169 aa11.38□□□□□ -0.59
TSPAN1-201ENST00000372003 ANHXE9PGG2 379 aa11.38□□□□□ -0.59
TSPAN1-201ENST00000372003 M0QYT0 321 aa11.38□□□□□ -0.59
TSPAN1-201ENST00000372003 FBP2O00757 339 aa11.38□□□□□ -0.59
TSPAN1-201ENST00000372003 MRASO14807 208 aa11.38□□□□□ -0.59
TSPAN1-201ENST00000372003 UBDO15205 165 aa11.38□□□□□ -0.59
TSPAN1-201ENST00000372003 CACNG3O60359 315 aa11.38□□□□□ -0.59
TSPAN1-201ENST00000372003 NRP2O60462 931 aa11.38□□□□□ -0.59
TSPAN1-201ENST00000372003 SNAP91O60641 907 aa11.38□□□□□ -0.59
TSPAN1-201ENST00000372003 STMN1P16949 149 aa11.38□□□□□ -0.59
TSPAN1-201ENST00000372003 IL10P22301 178 aa11.38□□□□□ -0.59
TSPAN1-201ENST00000372003 ATP6V0D1P61421 351 aa11.38□□□□□ -0.59
TSPAN1-201ENST00000372003 NME3Q13232 169 aa11.38□□□□□ -0.59
TSPAN1-201ENST00000372003 C16orf72Q14CZ0 275 aa11.38□□□□□ -0.59
TSPAN1-201ENST00000372003 MAP7D1Q3KQU3 841 aa11.38□□□□□ -0.59
TSPAN1-201ENST00000372003 SLC36A3Q495N2 470 aa11.38□□□□□ -0.59
TSPAN1-201ENST00000372003 COQ5Q5HYK3 327 aa11.38□□□□□ -0.59
TSPAN1-201ENST00000372003 PCID2Q5JVF3 399 aa11.38□□□□□ -0.59
TSPAN1-201ENST00000372003 C6orf10Q5SRN2 563 aa11.38□□□□□ -0.59
TSPAN1-201ENST00000372003 FAM182AQ5T1J6 154 aa11.38□□□□□ -0.59
TSPAN1-201ENST00000372003 GK5Q6ZS86 529 aa11.38□□□□□ -0.59
TSPAN1-201ENST00000372003 TAC4Q86UU9 113 aa11.38□□□□□ -0.59
TSPAN1-201ENST00000372003 YAF2Q8IY57 180 aa11.38□□□□□ -0.59
TSPAN1-201ENST00000372003 CENPLQ8N0S6 344 aaPredicted RBP11.38□□□□□ -0.59
TSPAN1-201ENST00000372003 GJD3Q8N144 294 aa11.38□□□□□ -0.59
TSPAN1-201ENST00000372003 PYROXD2Q8N2H3 581 aa11.38□□□□□ -0.59
TSPAN1-201ENST00000372003 SLC44A3Q8N4M1 653 aa11.38□□□□□ -0.59
TSPAN1-201ENST00000372003 RNF148Q8N7C7 305 aa11.38□□□□□ -0.59
TSPAN1-201ENST00000372003 FAM47BQ8NA70 645 aa11.38□□□□□ -0.59
TSPAN1-201ENST00000372003 DDHD1Q8NEL9 900 aa11.38□□□□□ -0.59
TSPAN1-201ENST00000372003 BPIFB1Q8TDL5 484 aa11.38□□□□□ -0.59
TSPAN1-201ENST00000372003 ADAMTS19Q8TE59 1207 aa11.38□□□□□ -0.59
TSPAN1-201ENST00000372003 GIPC3Q8TF64 312 aa11.38□□□□□ -0.59
TSPAN1-201ENST00000372003 KCTD4Q8WVF5 259 aa11.38□□□□□ -0.59
TSPAN1-201ENST00000372003 ELSPBP1Q96BH3 223 aa11.38□□□□□ -0.59
TSPAN1-201ENST00000372003 ATXN7L3BQ96GX2 97 aa11.38□□□□□ -0.59
TSPAN1-201ENST00000372003 NPLQ9BXD5 320 aaPredicted RBP11.38□□□□□ -0.59
TSPAN1-201ENST00000372003 KLF16Q9BXK1 252 aaPredicted RBP11.38□□□□□ -0.59
TSPAN1-201ENST00000372003 TRPV4Q9HBA0 871 aa11.38□□□□□ -0.59
TSPAN1-201ENST00000372003 XPR1Q9UBH6 696 aa11.38□□□□□ -0.59
TSPAN1-201ENST00000372003 ABCD2Q9UBJ2 740 aa11.38□□□□□ -0.59
TSPAN1-201ENST00000372003 SLC30A1Q9Y6M5 507 aa11.38□□□□□ -0.59
TSPAN1-201ENST00000372003 UNC80Q8N2C7 3258 aa11.38□□□□□ -0.59
TSPAN1-201ENST00000372003 E2F8A0AVK6 867 aa11.38□□□□□ -0.59
TSPAN1-201ENST00000372003 C19orf67A6NJJ6 358 aa11.38□□□□□ -0.59
TSPAN1-201ENST00000372003 GPC4O75487 556 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms