RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 DCLK1O15075 740 aa15.17■□□□□ 0.02
COL5A1-201ENST00000371817 IFNA21P01568 189 aa15.17■□□□□ 0.02
COL5A1-201ENST00000371817 APOC3P02656 99 aa15.17■□□□□ 0.02
COL5A1-201ENST00000371817 AMPD1P23109 780 aa15.17■□□□□ 0.02
COL5A1-201ENST00000371817 AQP1P29972 269 aa15.17■□□□□ 0.02
COL5A1-201ENST00000371817 OR3A3P47888 321 aa15.17■□□□□ 0.02
COL5A1-201ENST00000371817 OR3A2P47893 321 aa15.17■□□□□ 0.02
COL5A1-201ENST00000371817 SETMARQ53H47 684 aaPredicted RBP15.17■□□□□ 0.02
COL5A1-201ENST00000371817 EPHA10Q5JZY3 1008 aa15.17■□□□□ 0.02
COL5A1-201ENST00000371817 LPGAT1Q92604 370 aa15.17■□□□□ 0.02
COL5A1-201ENST00000371817 PHOX2BQ99453 314 aa15.17■□□□□ 0.02
COL5A1-201ENST00000371817 POLR2J2Q9GZM3 115 aaKnown RBP15.17■□□□□ 0.02
COL5A1-201ENST00000371817 BIN3Q9NQY0 253 aa15.17■□□□□ 0.02
COL5A1-201ENST00000371817 MTA2O94776 668 aa15.17■□□□□ 0.02
COL5A1-201ENST00000371817 EGFRP00533 1210 aa15.17■□□□□ 0.02
COL5A1-201ENST00000371817 NUMBP49757 651 aa15.17■□□□□ 0.02
COL5A1-201ENST00000371817 XRRA1Q6P2D8 792 aa15.17■□□□□ 0.02
COL5A1-201ENST00000371817 ORAI2Q96SN7 254 aa15.17■□□□□ 0.02
COL5A1-201ENST00000371817 TCEAL7Q9BRU2 100 aa15.17■□□□□ 0.02
COL5A1-201ENST00000371817 ZYG11BQ9C0D3 744 aa15.17■□□□□ 0.02
COL5A1-201ENST00000371817 UNC93B1Q9H1C4 597 aa15.17■□□□□ 0.02
COL5A1-201ENST00000371817 DHX33Q9H6R0 707 aaKnown RBP15.17■□□□□ 0.02
COL5A1-201ENST00000371817 MAT2BQ9NZL9 334 aa15.17■□□□□ 0.02
COL5A1-201ENST00000371817 TMEM9Q9P0T7 183 aa15.17■□□□□ 0.02
COL5A1-201ENST00000371817 TSPAN16Q9UKR8 245 aa15.17■□□□□ 0.02
COL5A1-201ENST00000371817 PCDHB7Q9Y5E2 793 aa15.17■□□□□ 0.02
COL5A1-201ENST00000371817 LRG1P02750 347 aa15.17■□□□□ 0.02
COL5A1-201ENST00000371817 MTMR2Q13614 643 aa15.17■□□□□ 0.02
COL5A1-201ENST00000371817 CCDC58Q4VC31 144 aa15.17■□□□□ 0.02
COL5A1-201ENST00000371817 ADGRG2Q8IZP9 1017 aa15.17■□□□□ 0.02
COL5A1-201ENST00000371817 SLC39A3Q9BRY0 314 aa15.17■□□□□ 0.02
COL5A1-201ENST00000371817 EBF2Q9HAK2 575 aa15.17■□□□□ 0.02
COL5A1-201ENST00000371817 TUBG2Q9NRH3 451 aa15.17■□□□□ 0.02
COL5A1-201ENST00000371817 BTNL10A8MVZ5 291 aa15.17■□□□□ 0.02
COL5A1-201ENST00000371817 ASMTP46597 345 aa15.17■□□□□ 0.02
COL5A1-201ENST00000371817 TUBP50607 506 aa15.17■□□□□ 0.02
COL5A1-201ENST00000371817 TKTL1P51854 596 aa15.17■□□□□ 0.02
COL5A1-201ENST00000371817 LIMK2P53671 638 aa15.17■□□□□ 0.02
COL5A1-201ENST00000371817 REP15Q6BDI9 236 aa15.17■□□□□ 0.02
COL5A1-201ENST00000371817 OR10H4Q8NGA5 316 aa15.17■□□□□ 0.02
COL5A1-201ENST00000371817 CNOT6Q9ULM6 557 aaKnown RBP15.17■□□□□ 0.02
COL5A1-201ENST00000371817 CDC42BPAQ5VT25 1732 aa15.17■□□□□ 0.02
COL5A1-201ENST00000371817 CIB4A0PJX0 185 aa15.17■□□□□ 0.02
COL5A1-201ENST00000371817 EML3Q32P44 896 aa15.17■□□□□ 0.02
COL5A1-201ENST00000371817 ZNF280BQ86YH2 543 aa15.17■□□□□ 0.02
COL5A1-201ENST00000371817 PHC3Q8NDX5 983 aa15.17■□□□□ 0.02
COL5A1-201ENST00000371817 POLR1EQ9GZS1 481 aaKnown RBP15.17■□□□□ 0.02
COL5A1-201ENST00000371817 IL1RAPQ9NPH3 570 aa15.17■□□□□ 0.02
COL5A1-201ENST00000371817 SLC17A7Q9P2U7 560 aa15.17■□□□□ 0.02
COL5A1-201ENST00000371817 GLS2Q9UI32 602 aa15.17■□□□□ 0.02
COL5A1-201ENST00000371817 PAQR7Q86WK9 346 aa15.16■□□□□ 0.02
COL5A1-201ENST00000371817 METTL25Q8N6Q8 603 aa15.16■□□□□ 0.02
COL5A1-201ENST00000371817 KIAA0895Q8NCT3 520 aa15.16■□□□□ 0.02
COL5A1-201ENST00000371817 YTHDF1Q9BYJ9 559 aaKnown RBP15.16■□□□□ 0.02
COL5A1-201ENST00000371817 C1orf109Q9NX04 203 aa15.16■□□□□ 0.02
COL5A1-201ENST00000371817 DDX43Q9NXZ2 648 aaKnown RBP15.16■□□□□ 0.02
COL5A1-201ENST00000371817 PCYT1BQ9Y5K3 369 aaPredicted RBP15.16■□□□□ 0.02
COL5A1-201ENST00000371817 AFDNP55196 1824 aaKnown RBP15.16■□□□□ 0.02
COL5A1-201ENST00000371817 H3BNH8 94 aa15.16■□□□□ 0.02
COL5A1-201ENST00000371817 CDKN2CP42773 168 aa15.16■□□□□ 0.02
COL5A1-201ENST00000371817 ZNF45Q02386 682 aa15.16■□□□□ 0.02
COL5A1-201ENST00000371817 FAM83AQ86UY5 434 aa15.16■□□□□ 0.02
COL5A1-201ENST00000371817 ZNF420Q8TAQ5 688 aaPredicted RBP15.16■□□□□ 0.02
COL5A1-201ENST00000371817 ADAM32Q8TC27 787 aa15.16■□□□□ 0.02
COL5A1-201ENST00000371817 GAD1Q99259 594 aa15.16■□□□□ 0.02
COL5A1-201ENST00000371817 TDRD3Q9H7E2 651 aaKnown RBP15.16■□□□□ 0.02
COL5A1-201ENST00000371817 OR10H1Q9Y4A9 318 aa15.16■□□□□ 0.02
COL5A1-201ENST00000371817 J3QRK9 145 aa15.16■□□□□ 0.02
COL5A1-201ENST00000371817 LYPLA1O75608 230 aaPredicted RBP15.16■□□□□ 0.02
COL5A1-201ENST00000371817 KAT7O95251 611 aa15.16■□□□□ 0.02
COL5A1-201ENST00000371817 MERTKQ12866 999 aa15.16■□□□□ 0.02
COL5A1-201ENST00000371817 MFSD10Q14728 455 aa15.16■□□□□ 0.02
COL5A1-201ENST00000371817 ACOX1Q15067 660 aa15.16■□□□□ 0.02
COL5A1-201ENST00000371817 FBXL8Q96CD0 374 aa15.16■□□□□ 0.02
COL5A1-201ENST00000371817 LGR4Q9BXB1 951 aa15.16■□□□□ 0.02
COL5A1-201ENST00000371817 FARSBQ9NSD9 589 aaKnown RBP15.16■□□□□ 0.02
COL5A1-201ENST00000371817 CPSF4LA6NMK7 179 aaKnown RBP15.16■□□□□ 0.02
COL5A1-201ENST00000371817 GRIA1P42261 906 aa15.16■□□□□ 0.02
COL5A1-201ENST00000371817 ABCG1P45844 678 aa15.16■□□□□ 0.02
COL5A1-201ENST00000371817 ZNF181Q2M3W8 571 aa15.16■□□□□ 0.02
COL5A1-201ENST00000371817 IQCKQ8N0W5 287 aa15.16■□□□□ 0.02
COL5A1-201ENST00000371817 OR52J3Q8NH60 311 aa15.16■□□□□ 0.02
COL5A1-201ENST00000371817 FBXO44Q9H4M3 255 aa15.16■□□□□ 0.02
COL5A1-201ENST00000371817 SAMD9Q5K651 1589 aa15.16■□□□□ 0.02
COL5A1-201ENST00000371817 KNL1Q8NG31 2342 aa15.16■□□□□ 0.02
COL5A1-201ENST00000371817 PGAM2P15259 253 aa15.16■□□□□ 0.02
COL5A1-201ENST00000371817 GNALP38405 381 aa15.16■□□□□ 0.02
COL5A1-201ENST00000371817 SNX20Q7Z614 316 aa15.16■□□□□ 0.02
COL5A1-201ENST00000371817 SCUBE3Q8IX30 993 aa15.16■□□□□ 0.02
COL5A1-201ENST00000371817 C7orf26Q96N11 449 aa15.16■□□□□ 0.02
COL5A1-201ENST00000371817 MRPL45Q9BRJ2 306 aaKnown RBP15.16■□□□□ 0.02
COL5A1-201ENST00000371817 TTLL2Q9BWV7 592 aa15.16■□□□□ 0.02
COL5A1-201ENST00000371817 OSBPL7Q9BZF2 842 aa15.16■□□□□ 0.02
COL5A1-201ENST00000371817 POMPQ9Y244 141 aa15.16■□□□□ 0.02
COL5A1-201ENST00000371817 PXDNLA1KZ92 1463 aa15.16■□□□□ 0.02
COL5A1-201ENST00000371817 CATP04040 527 aaKnown RBP15.16■□□□□ 0.02
COL5A1-201ENST00000371817 WASF2Q9Y6W5 498 aa15.16■□□□□ 0.02
COL5A1-201ENST00000371817 SCGB1D2O95969 90 aa15.16■□□□□ 0.02
COL5A1-201ENST00000371817 CHMP24386 653 aa15.16■□□□□ 0.02
COL5A1-201ENST00000371817 PRKCDQ05655 676 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms