RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 GBF1Q92538 1859 aa28.67■■■□□ 2.18
SSBP3-204ENST00000371320 C15orf38-AP3S2A0A0A6YYH1 394 aa28.67■■■□□ 2.18
SSBP3-204ENST00000371320 GIPC1O14908 333 aa28.67■■■□□ 2.18
SSBP3-204ENST00000371320 CSKP41240 450 aa28.67■■■□□ 2.18
SSBP3-204ENST00000371320 CCNHP51946 323 aaPredicted RBP28.67■■■□□ 2.18
SSBP3-204ENST00000371320 CDH18Q13634 790 aa28.67■■■□□ 2.18
SSBP3-204ENST00000371320 PABPC1LQ4VXU2 614 aaKnown RBP28.67■■■□□ 2.18
SSBP3-204ENST00000371320 PRMT9Q6P2P2 845 aa28.67■■■□□ 2.18
SSBP3-204ENST00000371320 SPATA19Q7Z5L4 167 aa28.67■■■□□ 2.18
SSBP3-204ENST00000371320 ARPINQ7Z6K5 226 aa28.67■■■□□ 2.18
SSBP3-204ENST00000371320 PBXIP1Q96AQ6 731 aa28.67■■■□□ 2.18
SSBP3-204ENST00000371320 AP4B1Q9Y6B7 739 aa28.67■■■□□ 2.18
SSBP3-204ENST00000371320 C9JVG2 144 aa28.66■■■□□ 2.18
SSBP3-204ENST00000371320 GPR39O43194 453 aa28.66■■■□□ 2.18
SSBP3-204ENST00000371320 CTPS1P17812 591 aa28.66■■■□□ 2.18
SSBP3-204ENST00000371320 HSPA13P48723 471 aa28.66■■■□□ 2.18
SSBP3-204ENST00000371320 IRX1P78414 480 aaPredicted RBP28.66■■■□□ 2.18
SSBP3-204ENST00000371320 OGFOD2Q6N063 350 aa28.66■■■□□ 2.18
SSBP3-204ENST00000371320 MAGEE1Q9HCI5 957 aa28.66■■■□□ 2.18
SSBP3-204ENST00000371320 ZNF225Q9UK10 706 aa28.66■■■□□ 2.18
SSBP3-204ENST00000371320 GPR45Q9Y5Y3 372 aa28.66■■■□□ 2.18
SSBP3-204ENST00000371320 IQCF5A8MTL0 148 aa28.66■■■□□ 2.18
SSBP3-204ENST00000371320 PRAMEF12O95522 483 aa28.66■■■□□ 2.18
SSBP3-204ENST00000371320 SLC7A1P30825 629 aa28.66■■■□□ 2.18
SSBP3-204ENST00000371320 DIO3P55073 304 aa28.66■■■□□ 2.18
SSBP3-204ENST00000371320 ARMC12Q5T9G4 340 aa28.66■■■□□ 2.18
SSBP3-204ENST00000371320 LYSMD3Q7Z3D4 306 aa28.66■■■□□ 2.18
SSBP3-204ENST00000371320 BHMTQ93088 406 aa28.66■■■□□ 2.18
SSBP3-204ENST00000371320 ESAMQ96AP7 390 aa28.66■■■□□ 2.18
SSBP3-204ENST00000371320 EME1Q96AY2 570 aa28.66■■■□□ 2.18
SSBP3-204ENST00000371320 DUS3LQ96G46 650 aaKnown RBP28.66■■■□□ 2.18
SSBP3-204ENST00000371320 TMEM169Q96HH4 297 aa28.66■■■□□ 2.18
SSBP3-204ENST00000371320 P2RY12Q9H244 342 aa28.66■■■□□ 2.18
SSBP3-204ENST00000371320 SLC24A3Q9HC58 644 aa28.66■■■□□ 2.18
SSBP3-204ENST00000371320 EIF2B4Q9UI10 523 aaKnown RBP28.66■■■□□ 2.18
SSBP3-204ENST00000371320 AP1G1O43747 822 aa28.65■■■□□ 2.18
SSBP3-204ENST00000371320 PARNO95453 639 aaKnown RBP28.65■■■□□ 2.18
SSBP3-204ENST00000371320 HMGCLP35914 325 aa28.65■■■□□ 2.18
SSBP3-204ENST00000371320 EPHB3P54753 998 aa28.65■■■□□ 2.18
SSBP3-204ENST00000371320 ARHGEF6Q15052 776 aa28.65■■■□□ 2.18
SSBP3-204ENST00000371320 MINDY1Q8N5J2 469 aa28.65■■■□□ 2.18
SSBP3-204ENST00000371320 LRTOMTQ8WZ04 291 aa28.65■■■□□ 2.18
SSBP3-204ENST00000371320 TBRG4Q969Z0 631 aaKnown RBP eCLIP28.65■■■□□ 2.181e-7■■■■■ 35.3
SSBP3-204ENST00000371320 SLCO4A1Q96BD0 722 aa28.65■■■□□ 2.18
SSBP3-204ENST00000371320 EID2BQ96D98 161 aa28.65■■■□□ 2.18
SSBP3-204ENST00000371320 MYO19Q96H55 970 aa28.65■■■□□ 2.18
SSBP3-204ENST00000371320 CENPKQ9BS16 269 aa28.65■■■□□ 2.18
SSBP3-204ENST00000371320 PFDN4Q9NQP4 134 aa28.65■■■□□ 2.18
SSBP3-204ENST00000371320 GID8Q9NWU2 228 aa28.65■■■□□ 2.18
SSBP3-204ENST00000371320 CNOT11Q9UKZ1 510 aaKnown RBP28.65■■■□□ 2.18
SSBP3-204ENST00000371320 CYBBP04839 570 aa28.65■■■□□ 2.18
SSBP3-204ENST00000371320 ALPIP09923 528 aa28.65■■■□□ 2.18
SSBP3-204ENST00000371320 PRR35P0CG20 571 aa28.65■■■□□ 2.18
SSBP3-204ENST00000371320 CLCN7P51798 805 aa28.65■■■□□ 2.18
SSBP3-204ENST00000371320 RAB33AQ14088 237 aa28.65■■■□□ 2.18
SSBP3-204ENST00000371320 IKBKEQ14164 716 aa28.65■■■□□ 2.18
SSBP3-204ENST00000371320 BLOC1S3Q6QNY0 202 aa28.65■■■□□ 2.18
SSBP3-204ENST00000371320 GPRIN3Q6ZVF9 776 aa28.65■■■□□ 2.18
SSBP3-204ENST00000371320 ARL14EPQ8N8R7 260 aaPredicted RBP28.65■■■□□ 2.18
SSBP3-204ENST00000371320 TTC16Q8NEE8 873 aa28.65■■■□□ 2.18
SSBP3-204ENST00000371320 WFDC5Q8TCV5 224 aa28.65■■■□□ 2.18
SSBP3-204ENST00000371320 TM6SF2Q9BZW4 377 aa28.65■■■□□ 2.18
SSBP3-204ENST00000371320 SEMA6AQ9H2E6 1030 aa28.65■■■□□ 2.18
SSBP3-204ENST00000371320 PIDD1Q9HB75 910 aa28.65■■■□□ 2.18
SSBP3-204ENST00000371320 GMPR2Q9P2T1 348 aaKnown RBP28.65■■■□□ 2.18
SSBP3-204ENST00000371320 ABCD2Q9UBJ2 740 aa28.65■■■□□ 2.18
SSBP3-204ENST00000371320 K7ERQ8 282 aa28.64■■■□□ 2.18
SSBP3-204ENST00000371320 NME4O00746 187 aa28.64■■■□□ 2.18
SSBP3-204ENST00000371320 AP1S1P61966 158 aa28.64■■■□□ 2.18
SSBP3-204ENST00000371320 TGFBIQ15582 683 aa28.64■■■□□ 2.18
SSBP3-204ENST00000371320 DCAF4L2Q8NA75 395 aa28.64■■■□□ 2.18
SSBP3-204ENST00000371320 ADAMTS19Q8TE59 1207 aa28.64■■■□□ 2.18
SSBP3-204ENST00000371320 ALG14Q96F25 216 aa28.64■■■□□ 2.18
SSBP3-204ENST00000371320 EFHD1Q9BUP0 239 aa28.64■■■□□ 2.18
SSBP3-204ENST00000371320 ENO4A6NNW6 628 aa28.63■■■□□ 2.17
SSBP3-204ENST00000371320 E2F3O00716 465 aa28.63■■■□□ 2.17
SSBP3-204ENST00000371320 PRMT5O14744 637 aaPredicted RBP28.63■■■□□ 2.17
SSBP3-204ENST00000371320 GREM1O60565 184 aa28.63■■■□□ 2.17
SSBP3-204ENST00000371320 PGLSO95336 258 aa28.63■■■□□ 2.17
SSBP3-204ENST00000371320 LIN52Q52LA3 116 aa28.63■■■□□ 2.17
SSBP3-204ENST00000371320 XKR7Q5GH72 579 aa28.63■■■□□ 2.17
SSBP3-204ENST00000371320 CAMK1DQ8IU85 385 aa28.63■■■□□ 2.17
SSBP3-204ENST00000371320 ZNF558Q96NG5 402 aa28.63■■■□□ 2.17
SSBP3-204ENST00000371320 DEFB118Q96PH6 123 aa28.63■■■□□ 2.17
SSBP3-204ENST00000371320 ZNF334Q9HCZ1 680 aaPredicted RBP28.63■■■□□ 2.17
SSBP3-204ENST00000371320 UBAP1Q9NZ09 502 aa28.63■■■□□ 2.17
SSBP3-204ENST00000371320 DNMT3BQ9UBC3 853 aaKnown RBP28.63■■■□□ 2.17
SSBP3-204ENST00000371320 DHRS7Q9Y394 339 aa28.63■■■□□ 2.17
SSBP3-204ENST00000371320 ASB1Q9Y576 335 aa28.63■■■□□ 2.17
SSBP3-204ENST00000371320 PCDHB1Q9Y5F3 818 aa28.63■■■□□ 2.17
SSBP3-204ENST00000371320 SNX13Q9Y5W8 968 aa28.63■■■□□ 2.17
SSBP3-204ENST00000371320 GOLGA8CPA6NN73 597 aa28.63■■■□□ 2.17
SSBP3-204ENST00000371320 FKTNO75072 461 aa28.63■■■□□ 2.17
SSBP3-204ENST00000371320 PRMT2P55345 433 aa28.63■■■□□ 2.17
SSBP3-204ENST00000371320 COQ5Q5HYK3 327 aa28.63■■■□□ 2.17
SSBP3-204ENST00000371320 C6orf52Q5T4I8 152 aa28.63■■■□□ 2.17
SSBP3-204ENST00000371320 TXNDC8Q6A555 127 aa28.63■■■□□ 2.17
SSBP3-204ENST00000371320 SCIMPQ6UWF3 145 aa28.63■■■□□ 2.17
SSBP3-204ENST00000371320 CERS6Q6ZMG9 384 aa28.63■■■□□ 2.17
SSBP3-204ENST00000371320 OR2T34Q8NGX1 318 aa28.63■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms