RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 OR2AG1Q9H205 316 aa20.3■□□□□ 0.84
SMNDC1-201ENST00000369592 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.3■□□□□ 0.842e-6■■■■□ 20.2
SMNDC1-201ENST00000369592 TBC1D29Q9UFV1 150 aa20.3■□□□□ 0.84
SMNDC1-201ENST00000369592 ZNHIT2Q9UHR6 403 aa20.3■□□□□ 0.84
SMNDC1-201ENST00000369592 AK5Q9Y6K8 562 aa20.3■□□□□ 0.84
SMNDC1-201ENST00000369592 VEGFDO43915 354 aa20.29■□□□□ 0.84
SMNDC1-201ENST00000369592 MPOP05164 745 aa20.29■□□□□ 0.84
SMNDC1-201ENST00000369592 SPAM1P38567 509 aa20.29■□□□□ 0.84
SMNDC1-201ENST00000369592 GPR3P46089 330 aa20.29■□□□□ 0.84
SMNDC1-201ENST00000369592 PTPRCAPQ14761 206 aa20.29■□□□□ 0.84
SMNDC1-201ENST00000369592 SIX1Q15475 284 aaPredicted RBP20.29■□□□□ 0.84
SMNDC1-201ENST00000369592 TAF1AQ15573 450 aaPredicted RBP20.29■□□□□ 0.84
SMNDC1-201ENST00000369592 CHRNA6Q15825 494 aa20.29■□□□□ 0.84
SMNDC1-201ENST00000369592 TBC1D25Q3MII6 688 aa20.29■□□□□ 0.84
SMNDC1-201ENST00000369592 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.29■□□□□ 0.84
SMNDC1-201ENST00000369592 PHYKPLQ8IUZ5 450 aa20.29■□□□□ 0.84
SMNDC1-201ENST00000369592 GFM1Q96RP9 751 aaKnown RBP20.29■□□□□ 0.84
SMNDC1-201ENST00000369592 TMEM121Q9BTD3 319 aa20.29■□□□□ 0.84
SMNDC1-201ENST00000369592 SLC23A2Q9UGH3 650 aa20.29■□□□□ 0.84
SMNDC1-201ENST00000369592 PCDHGA8Q9Y5G5 932 aa20.29■□□□□ 0.84
SMNDC1-201ENST00000369592 AHCTF1Q8WYP5 2266 aa20.28■□□□□ 0.84
SMNDC1-201ENST00000369592 PMS2P1A4D2B8 440 aa20.28■□□□□ 0.84
SMNDC1-201ENST00000369592 GABREP78334 506 aa20.28■□□□□ 0.84
SMNDC1-201ENST00000369592 PRPSAP1Q14558 356 aa20.28■□□□□ 0.84
SMNDC1-201ENST00000369592 IYDQ6PHW0 289 aa20.28■□□□□ 0.84
SMNDC1-201ENST00000369592 CHST15Q7LFX5 561 aaPredicted RBP20.28■□□□□ 0.84
SMNDC1-201ENST00000369592 C11orf96Q7Z7L8 435 aa20.28■□□□□ 0.84
SMNDC1-201ENST00000369592 SLITRK4Q8IW52 837 aa20.28■□□□□ 0.84
SMNDC1-201ENST00000369592 Q8N9G6 341 aaPredicted RBP20.28■□□□□ 0.84
SMNDC1-201ENST00000369592 BRSK1Q8TDC3 778 aa20.28■□□□□ 0.84
SMNDC1-201ENST00000369592 SLC37A2Q8TED4 501 aa20.28■□□□□ 0.84
SMNDC1-201ENST00000369592 ATG4AQ8WYN0 398 aa20.28■□□□□ 0.84
SMNDC1-201ENST00000369592 APOL2Q9BQE5 337 aa20.28■□□□□ 0.84
SMNDC1-201ENST00000369592 TLR10Q9BXR5 811 aa20.28■□□□□ 0.84
SMNDC1-201ENST00000369592 FRMD8P1Q9BZ68 369 aaPredicted RBP20.28■□□□□ 0.84
SMNDC1-201ENST00000369592 SMOXQ9NWM0 555 aa20.28■□□□□ 0.84
SMNDC1-201ENST00000369592 SATB2Q9UPW6 733 aa20.28■□□□□ 0.84
SMNDC1-201ENST00000369592 ARL5AQ9Y689 179 aa20.28■□□□□ 0.84
SMNDC1-201ENST00000369592 AGAP14A8MT82 685 aa20.27■□□□□ 0.84
SMNDC1-201ENST00000369592 BUD23O43709 281 aaKnown RBP20.27■□□□□ 0.84
SMNDC1-201ENST00000369592 LIASO43766 372 aa20.27■□□□□ 0.84
SMNDC1-201ENST00000369592 MTX2O75431 263 aa20.27■□□□□ 0.84
SMNDC1-201ENST00000369592 ACP5P13686 325 aa20.27■□□□□ 0.84
SMNDC1-201ENST00000369592 LPOP22079 712 aaPredicted RBP20.27■□□□□ 0.84
SMNDC1-201ENST00000369592 CD1CP29017 333 aa20.27■□□□□ 0.84
SMNDC1-201ENST00000369592 EIF2S3P41091 472 aaKnown RBP20.27■□□□□ 0.84
SMNDC1-201ENST00000369592 TNNT3P45378 269 aaPredicted RBP20.27■□□□□ 0.84
SMNDC1-201ENST00000369592 OR1D5P58170 312 aa20.27■□□□□ 0.84
SMNDC1-201ENST00000369592 XIAPP98170 497 aa20.27■□□□□ 0.84
SMNDC1-201ENST00000369592 RPS6KA1Q15418 735 aa20.27■□□□□ 0.84
SMNDC1-201ENST00000369592 CLPPQ16740 277 aaPredicted RBP20.27■□□□□ 0.84
SMNDC1-201ENST00000369592 LSMEM2Q8N112 164 aa20.27■□□□□ 0.84
SMNDC1-201ENST00000369592 DDHD1Q8NEL9 900 aa20.27■□□□□ 0.84
SMNDC1-201ENST00000369592 FGF11Q92914 225 aa20.27■□□□□ 0.84
SMNDC1-201ENST00000369592 ZNF578Q96N58 590 aaPredicted RBP20.27■□□□□ 0.84
SMNDC1-201ENST00000369592 SLC46A1Q96NT5 459 aa20.27■□□□□ 0.84
SMNDC1-201ENST00000369592 TBL1YQ9BQ87 522 aa20.27■□□□□ 0.84
SMNDC1-201ENST00000369592 LZTFL1Q9NQ48 299 aa20.27■□□□□ 0.84
SMNDC1-201ENST00000369592 FEZ2Q9UHY8 353 aaPredicted RBP20.27■□□□□ 0.84
SMNDC1-201ENST00000369592 ATXN7L1Q9ULK2 861 aaPredicted RBP20.27■□□□□ 0.84
SMNDC1-201ENST00000369592 KCNK6Q9Y257 313 aa20.27■□□□□ 0.84
SMNDC1-201ENST00000369592 KCTD3Q9Y597 815 aa20.27■□□□□ 0.84
SMNDC1-201ENST00000369592 IGSF10Q6WRI0 2623 aa20.26■□□□□ 0.83
SMNDC1-201ENST00000369592 CCDC187A0A096LP49 1063 aa20.26■□□□□ 0.83
SMNDC1-201ENST00000369592 GLYATL1P3A0A0U1RQE8 302 aa20.26■□□□□ 0.83
SMNDC1-201ENST00000369592 EIF4E1BA6NMX2 242 aaKnown RBP20.26■□□□□ 0.83
SMNDC1-201ENST00000369592 CDRT15L2A8MXV6 281 aa20.26■□□□□ 0.83
SMNDC1-201ENST00000369592 TMX2-CTNND1H3BSU7 103 aa20.26■□□□□ 0.83
SMNDC1-201ENST00000369592 GPR39O43194 453 aa20.26■□□□□ 0.83
SMNDC1-201ENST00000369592 UGT1A9O60656 530 aa20.26■□□□□ 0.83
SMNDC1-201ENST00000369592 UGT1A6P19224 532 aa20.26■□□□□ 0.83
SMNDC1-201ENST00000369592 UGT1A1P22309 533 aa20.26■□□□□ 0.83
SMNDC1-201ENST00000369592 UGT1A4P22310 534 aa20.26■□□□□ 0.83
SMNDC1-201ENST00000369592 PSMA3P25788 255 aa20.26■□□□□ 0.83
SMNDC1-201ENST00000369592 STIP1P31948 543 aaKnown RBP20.26■□□□□ 0.83
SMNDC1-201ENST00000369592 UGT1A3P35503 534 aa20.26■□□□□ 0.83
SMNDC1-201ENST00000369592 UGT1A5P35504 534 aa20.26■□□□□ 0.83
SMNDC1-201ENST00000369592 ZNF140P52738 457 aaPredicted RBP20.26■□□□□ 0.83
SMNDC1-201ENST00000369592 ERVPABLB-1P60509 514 aa20.26■□□□□ 0.83
SMNDC1-201ENST00000369592 CFHR1Q03591 330 aa20.26■□□□□ 0.83
SMNDC1-201ENST00000369592 TMEM115Q12893 351 aaPredicted RBP20.26■□□□□ 0.83
SMNDC1-201ENST00000369592 SPARCL1Q14515 664 aa20.26■□□□□ 0.83
SMNDC1-201ENST00000369592 FAM151BQ6UXP7 276 aa20.26■□□□□ 0.83
SMNDC1-201ENST00000369592 ZNF574Q6ZN55 896 aaPredicted RBP20.26■□□□□ 0.83
SMNDC1-201ENST00000369592 WDR36Q8NI36 951 aaKnown RBP20.26■□□□□ 0.83
SMNDC1-201ENST00000369592 BBC3Q96PG8 261 aaPredicted RBP20.26■□□□□ 0.83
SMNDC1-201ENST00000369592 TIMM29Q9BSF4 260 aa20.26■□□□□ 0.83
SMNDC1-201ENST00000369592 GRPEL1Q9HAV7 217 aa20.26■□□□□ 0.83
SMNDC1-201ENST00000369592 UGT1A7Q9HAW7 530 aa20.26■□□□□ 0.83
SMNDC1-201ENST00000369592 UGT1A10Q9HAW8 530 aa20.26■□□□□ 0.83
SMNDC1-201ENST00000369592 UGT1A8Q9HAW9 530 aa20.26■□□□□ 0.83
SMNDC1-201ENST00000369592 PPP2R2CQ9Y2T4 447 aa20.26■□□□□ 0.83
SMNDC1-201ENST00000369592 PKP3Q9Y446 797 aa20.26■□□□□ 0.83
SMNDC1-201ENST00000369592 RHPN2P1A8MT19 583 aa20.25■□□□□ 0.83
SMNDC1-201ENST00000369592 KMOO15229 486 aa20.25■□□□□ 0.83
SMNDC1-201ENST00000369592 STX7O15400 261 aaKnown RBP20.25■□□□□ 0.83
SMNDC1-201ENST00000369592 LDB2O43679 373 aa20.25■□□□□ 0.83
SMNDC1-201ENST00000369592 CDK14O94921 469 aa20.25■□□□□ 0.83
SMNDC1-201ENST00000369592 F3P13726 295 aa20.25■□□□□ 0.83
SMNDC1-201ENST00000369592 ZNF7P17097 686 aaPredicted RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms