RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 CTSLP07711 333 aa6.84□□□□□ -1.31
CSDE1-204ENST00000369530 GSTM1P09488 218 aa6.84□□□□□ -1.31
CSDE1-204ENST00000369530 TFPTP0C1Z6 253 aa6.84□□□□□ -1.31
CSDE1-204ENST00000369530 GRIK1P39086 918 aa6.84□□□□□ -1.31
CSDE1-204ENST00000369530 TRIP13Q15645 432 aaPredicted RBP6.84□□□□□ -1.31
CSDE1-204ENST00000369530 CYP2A13Q16696 494 aa6.84□□□□□ -1.31
CSDE1-204ENST00000369530 EFHC1Q5JVL4 640 aa6.84□□□□□ -1.31
CSDE1-204ENST00000369530 IRAK1BP1Q5VVH5 260 aa6.84□□□□□ -1.31
CSDE1-204ENST00000369530 LYSMD3Q7Z3D4 306 aa6.84□□□□□ -1.31
CSDE1-204ENST00000369530 TAB3Q8N5C8 712 aaPredicted RBP6.84□□□□□ -1.31
CSDE1-204ENST00000369530 ANKRD53Q8N9V6 530 aa6.84□□□□□ -1.31
CSDE1-204ENST00000369530 ACSF2Q96CM8 615 aaPredicted RBP6.84□□□□□ -1.31
CSDE1-204ENST00000369530 DCUN1D1Q96GG9 259 aa6.84□□□□□ -1.31
CSDE1-204ENST00000369530 SCARF2Q96GP6 870 aaPredicted RBP6.84□□□□□ -1.31
CSDE1-204ENST00000369530 FAM118BQ9BPY3 351 aa6.84□□□□□ -1.31
CSDE1-204ENST00000369530 TRMT61BQ9BVS5 477 aaKnown RBP6.84□□□□□ -1.31
CSDE1-204ENST00000369530 LIN7BQ9HAP6 207 aa6.84□□□□□ -1.31
CSDE1-204ENST00000369530 ZSCAN32Q9NX65 697 aa6.84□□□□□ -1.31
CSDE1-204ENST00000369530 ASIC3Q9UHC3 531 aa6.84□□□□□ -1.31
CSDE1-204ENST00000369530 PILRBQ9UKJ0 227 aa6.84□□□□□ -1.31
CSDE1-204ENST00000369530 MFHAS1Q9Y4C4 1052 aa6.84□□□□□ -1.31
CSDE1-204ENST00000369530 RALGAPA1Q6GYQ0 2036 aa6.84□□□□□ -1.31
CSDE1-204ENST00000369530 AP3B1O00203 1094 aa6.84□□□□□ -1.31
CSDE1-204ENST00000369530 PLTPP55058 493 aa6.84□□□□□ -1.31
CSDE1-204ENST00000369530 ATP1A4Q13733 1029 aa6.84□□□□□ -1.31
CSDE1-204ENST00000369530 GOLGA7BQ2TAP0 167 aa6.84□□□□□ -1.31
CSDE1-204ENST00000369530 ANKRD26P1Q6NSI1 321 aa6.84□□□□□ -1.31
CSDE1-204ENST00000369530 CAPN12Q6ZSI9 719 aa6.84□□□□□ -1.31
CSDE1-204ENST00000369530 SLC41A1Q8IVJ1 513 aa6.84□□□□□ -1.31
CSDE1-204ENST00000369530 SAMD14Q8IZD0 417 aaPredicted RBP6.84□□□□□ -1.31
CSDE1-204ENST00000369530 KRT35Q92764 455 aa6.84□□□□□ -1.31
CSDE1-204ENST00000369530 ATP2A3Q93084 1043 aa6.84□□□□□ -1.31
CSDE1-204ENST00000369530 REXO5Q96IC2 774 aaKnown RBP6.84□□□□□ -1.31
CSDE1-204ENST00000369530 HEXIM2Q96MH2 286 aaKnown RBP6.84□□□□□ -1.31
CSDE1-204ENST00000369530 GON7Q9BXV9 100 aa6.84□□□□□ -1.31
CSDE1-204ENST00000369530 RPF2Q9H7B2 306 aaKnown RBP6.84□□□□□ -1.31
CSDE1-204ENST00000369530 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.84□□□□□ -1.31
CSDE1-204ENST00000369530 POU2F3Q9UKI9 436 aa6.84□□□□□ -1.31
CSDE1-204ENST00000369530 NAALADL1Q9UQQ1 740 aa6.84□□□□□ -1.31
CSDE1-204ENST00000369530 NPC1O15118 1278 aa6.84□□□□□ -1.32
CSDE1-204ENST00000369530 TRIM24O15164 1050 aa6.84□□□□□ -1.32
CSDE1-204ENST00000369530 TSPAN3O60637 253 aa6.84□□□□□ -1.32
CSDE1-204ENST00000369530 IGHV4-34P06331 123 aa6.84□□□□□ -1.32
CSDE1-204ENST00000369530 GABRG2P18507 467 aa6.84□□□□□ -1.32
CSDE1-204ENST00000369530 CBX5P45973 191 aa6.84□□□□□ -1.32
CSDE1-204ENST00000369530 KCNJ1P48048 391 aa6.84□□□□□ -1.32
CSDE1-204ENST00000369530 MARCKSL1P49006 195 aa6.84□□□□□ -1.32
CSDE1-204ENST00000369530 CLK1P49759 484 aaKnown RBP6.84□□□□□ -1.32
CSDE1-204ENST00000369530 BMXP51813 675 aa6.84□□□□□ -1.32
CSDE1-204ENST00000369530 SIX1Q15475 284 aaPredicted RBP6.84□□□□□ -1.32
CSDE1-204ENST00000369530 LONRF1Q17RB8 773 aa6.84□□□□□ -1.32
CSDE1-204ENST00000369530 ITPRIPL2Q3MIP1 535 aa6.84□□□□□ -1.32
CSDE1-204ENST00000369530 DNAJC24Q6P3W2 148 aa6.84□□□□□ -1.32
CSDE1-204ENST00000369530 DGLUCYQ7Z3D6 616 aa6.84□□□□□ -1.32
CSDE1-204ENST00000369530 LILRB2Q8N423 598 aa6.84□□□□□ -1.32
CSDE1-204ENST00000369530 IGSF8Q969P0 613 aa6.84□□□□□ -1.32
CSDE1-204ENST00000369530 METTL2AQ96IZ6 378 aaKnown RBP6.84□□□□□ -1.32
CSDE1-204ENST00000369530 ZFYVE19Q96K21 471 aa6.84□□□□□ -1.32
CSDE1-204ENST00000369530 PHF12Q96QT6 1004 aa6.84□□□□□ -1.32
CSDE1-204ENST00000369530 TUBA1CQ9BQE3 449 aa6.84□□□□□ -1.32
CSDE1-204ENST00000369530 CCDC106Q9BWC9 280 aa6.84□□□□□ -1.32
CSDE1-204ENST00000369530 APOL5Q9BWW9 433 aa6.84□□□□□ -1.32
CSDE1-204ENST00000369530 MAGEB5Q9BZ81 275 aa6.84□□□□□ -1.32
CSDE1-204ENST00000369530 PCED1AQ9H1Q7 454 aa6.84□□□□□ -1.32
CSDE1-204ENST00000369530 KCNN2Q9H2S1 579 aa6.84□□□□□ -1.32
CSDE1-204ENST00000369530 MARCH7Q9H992 704 aa6.84□□□□□ -1.32
CSDE1-204ENST00000369530 ABCC13Q9NSE7 274 aa6.84□□□□□ -1.32
CSDE1-204ENST00000369530 VANGL2Q9ULK5 521 aa6.84□□□□□ -1.32
CSDE1-204ENST00000369530 SNX24Q9Y343 169 aa6.84□□□□□ -1.32
CSDE1-204ENST00000369530 TMEM191CA6NGB0 347 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 UGT1A9O60656 530 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 TMCC2O75069 709 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 USP1O94782 785 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 LRG1P02750 347 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 UGT2B4P06133 528 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 UGT1A6P19224 532 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 UGT1A1P22309 533 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 UGT1A4P22310 534 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 RFC1P35251 1148 aaPredicted RBP6.83□□□□□ -1.32
CSDE1-204ENST00000369530 IDUAP35475 653 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 UGT1A3P35503 534 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 UGT1A5P35504 534 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 GBE1Q04446 702 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 GEN1Q17RS7 908 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 SLC25A52Q3SY17 297 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 ACAD10Q6JQN1 1059 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 SLC23A3Q6PIS1 610 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 GPR141Q7Z602 305 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 CPNE8Q86YQ8 564 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 LACC1Q8IV20 430 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 FAM160A2Q8N612 972 aaPredicted RBP6.83□□□□□ -1.32
CSDE1-204ENST00000369530 TSPAN14Q8NG11 270 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 MGARPQ8TDB4 240 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 C1orf54Q8WWF1 131 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 MTBPQ96DY7 904 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 CDK5RAP1Q96SZ6 601 aaKnown RBP6.83□□□□□ -1.32
CSDE1-204ENST00000369530 UGT1A7Q9HAW7 530 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 UGT1A10Q9HAW8 530 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 UGT1A8Q9HAW9 530 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 ITM2CQ9NQX7 267 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms