RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 MRPL38Q96DV4 380 aaKnown RBP13.9□□□□□ -0.18
USF1-202ENST00000368020 MYCBPQ99417 103 aaPredicted RBP13.9□□□□□ -0.18
USF1-202ENST00000368020 VCXQ9H320 206 aa13.9□□□□□ -0.18
USF1-202ENST00000368020 NUDT4Q9NZJ9 180 aa13.9□□□□□ -0.18
USF1-202ENST00000368020 SUCOQ9UBS9 1254 aaKnown RBP13.9□□□□□ -0.18
USF1-202ENST00000368020 PPM1HQ9ULR3 514 aa13.9□□□□□ -0.18
USF1-202ENST00000368020 MED16Q9Y2X0 877 aa13.9□□□□□ -0.18
USF1-202ENST00000368020 TNPO3Q9Y5L0 923 aaKnown RBP13.9□□□□□ -0.18
USF1-202ENST00000368020 BTN3A1O00481 513 aa13.9□□□□□ -0.18
USF1-202ENST00000368020 TRIM38O00635 465 aa13.9□□□□□ -0.18
USF1-202ENST00000368020 CASQ2O14958 399 aaPredicted RBP13.9□□□□□ -0.18
USF1-202ENST00000368020 ECI2O75521 394 aa13.9□□□□□ -0.18
USF1-202ENST00000368020 ITGALP20701 1170 aa13.9□□□□□ -0.18
USF1-202ENST00000368020 DDX6P26196 483 aaKnown RBP eCLIP13.9□□□□□ -0.18
USF1-202ENST00000368020 SERPINA4P29622 427 aa13.9□□□□□ -0.18
USF1-202ENST00000368020 EEF1DP29692 281 aaKnown RBP13.9□□□□□ -0.18
USF1-202ENST00000368020 MRPL19P49406 292 aaKnown RBP13.9□□□□□ -0.18
USF1-202ENST00000368020 SH3BP2P78314 561 aa13.9□□□□□ -0.18
USF1-202ENST00000368020 SPATS1Q496A3 300 aa13.9□□□□□ -0.18
USF1-202ENST00000368020 PRMT9Q6P2P2 845 aa13.9□□□□□ -0.18
USF1-202ENST00000368020 TAS2R42Q7RTR8 314 aa13.9□□□□□ -0.18
USF1-202ENST00000368020 GPSM1Q86YR5 675 aa13.9□□□□□ -0.18
USF1-202ENST00000368020 RBFAQ8N0V3 343 aa13.9□□□□□ -0.18
USF1-202ENST00000368020 PLCD3Q8N3E9 789 aa13.9□□□□□ -0.18
USF1-202ENST00000368020 KREMEN2Q8NCW0 462 aa13.9□□□□□ -0.18
USF1-202ENST00000368020 OR56A4Q8NGH8 313 aa13.9□□□□□ -0.18
USF1-202ENST00000368020 GRIN3AQ8TCU5 1115 aa13.9□□□□□ -0.18
USF1-202ENST00000368020 CD200R1Q8TD46 325 aa13.9□□□□□ -0.18
USF1-202ENST00000368020 TWIST2Q8WVJ9 160 aa13.9□□□□□ -0.18
USF1-202ENST00000368020 ISG20Q96AZ6 181 aaKnown RBP13.9□□□□□ -0.18
USF1-202ENST00000368020 NR1H4Q96RI1 486 aaPredicted RBP13.9□□□□□ -0.18
USF1-202ENST00000368020 TUBGCP5Q96RT8 1024 aa13.9□□□□□ -0.18
USF1-202ENST00000368020 CDCA3Q99618 268 aaPredicted RBP13.9□□□□□ -0.18
USF1-202ENST00000368020 CLPBQ9H078 707 aa13.9□□□□□ -0.18
USF1-202ENST00000368020 P2RY12Q9H244 342 aa13.9□□□□□ -0.18
USF1-202ENST00000368020 ZNF576Q9H609 170 aa13.9□□□□□ -0.18
USF1-202ENST00000368020 ZFYVE1Q9HBF4 777 aa13.9□□□□□ -0.18
USF1-202ENST00000368020 ABCB8Q9NUT2 735 aa13.9□□□□□ -0.18
USF1-202ENST00000368020 ZDHHC7Q9NXF8 308 aa13.9□□□□□ -0.18
USF1-202ENST00000368020 GNPTGQ9UJJ9 305 aa13.9□□□□□ -0.18
USF1-202ENST00000368020 PSMD13Q9UNM6 376 aa13.9□□□□□ -0.18
USF1-202ENST00000368020 FCF1Q9Y324 198 aaKnown RBP13.9□□□□□ -0.18
USF1-202ENST00000368020 DNAJC15Q9Y5T4 150 aa13.9□□□□□ -0.18
USF1-202ENST00000368020 A0A0J9YYE9 177 aa13.89□□□□□ -0.19
USF1-202ENST00000368020 A0A1W2PQ67 120 aa13.89□□□□□ -0.19
USF1-202ENST00000368020 EPOPA6NHQ4 379 aa13.89□□□□□ -0.19
USF1-202ENST00000368020 SOBPA7XYQ1 873 aa13.89□□□□□ -0.19
USF1-202ENST00000368020 BCAS2O75934 225 aaPredicted RBP13.89□□□□□ -0.19
USF1-202ENST00000368020 STAMBPO95630 424 aa13.89□□□□□ -0.19
USF1-202ENST00000368020 TRBC1P01850 177 aa13.89□□□□□ -0.19
USF1-202ENST00000368020 IDO1P14902 403 aa13.89□□□□□ -0.19
USF1-202ENST00000368020 LBPP18428 481 aa13.89□□□□□ -0.19
USF1-202ENST00000368020 CHRM3P20309 590 aa13.89□□□□□ -0.19
USF1-202ENST00000368020 HOXA9P31269 272 aa13.89□□□□□ -0.19
USF1-202ENST00000368020 RGS4P49798 205 aa13.89□□□□□ -0.19
USF1-202ENST00000368020 PKNOX1P55347 436 aa13.89□□□□□ -0.19
USF1-202ENST00000368020 TSNQ15631 228 aaKnown RBP13.89□□□□□ -0.19
USF1-202ENST00000368020 GPR33Q49SQ1 333 aa13.89□□□□□ -0.19
USF1-202ENST00000368020 AGKQ53H12 422 aa13.89□□□□□ -0.19
USF1-202ENST00000368020 SETMARQ53H47 684 aaPredicted RBP13.89□□□□□ -0.19
USF1-202ENST00000368020 COQ5Q5HYK3 327 aa13.89□□□□□ -0.19
USF1-202ENST00000368020 CTSL3PQ5NE16 218 aa13.89□□□□□ -0.19
USF1-202ENST00000368020 ZDHHC20Q5W0Z9 365 aa13.89□□□□□ -0.19
USF1-202ENST00000368020 CLEC6AQ6EIG7 209 aa13.89□□□□□ -0.19
USF1-202ENST00000368020 OGFOD2Q6N063 350 aa13.89□□□□□ -0.19
USF1-202ENST00000368020 ELMSAN1Q6PJG2 1045 aa13.89□□□□□ -0.19
USF1-202ENST00000368020 SPATA19Q7Z5L4 167 aa13.89□□□□□ -0.19
USF1-202ENST00000368020 SNX20Q7Z614 316 aa13.89□□□□□ -0.19
USF1-202ENST00000368020 PIANPQ8IYJ0 282 aa13.89□□□□□ -0.19
USF1-202ENST00000368020 CBARPQ8N350 705 aaPredicted RBP13.89□□□□□ -0.19
USF1-202ENST00000368020 PAF1Q8N7H5 531 aa13.89□□□□□ -0.19
USF1-202ENST00000368020 ZNF483Q8TF39 744 aaPredicted RBP13.89□□□□□ -0.19
USF1-202ENST00000368020 SLC22A17Q8WUG5 538 aa13.89□□□□□ -0.19
USF1-202ENST00000368020 PIH1D2Q8WWB5 315 aa13.89□□□□□ -0.19
USF1-202ENST00000368020 PYDC1Q8WXC3 89 aa13.89□□□□□ -0.19
USF1-202ENST00000368020 PPP2R3CQ969Q6 453 aa13.89□□□□□ -0.19
USF1-202ENST00000368020 ASB9Q96DX5 294 aa13.89□□□□□ -0.19
USF1-202ENST00000368020 MARK4Q96L34 752 aa13.89□□□□□ -0.19
USF1-202ENST00000368020 SLC22A12Q96S37 553 aa13.89□□□□□ -0.19
USF1-202ENST00000368020 ECSITQ9BQ95 431 aa13.89□□□□□ -0.19
USF1-202ENST00000368020 KLHL4Q9C0H6 718 aa13.89□□□□□ -0.19
USF1-202ENST00000368020 SPAG4Q9NPE6 437 aa13.89□□□□□ -0.19
USF1-202ENST00000368020 CACNA2D2Q9NY47 1150 aa13.89□□□□□ -0.19
USF1-202ENST00000368020 LMCD1Q9NZU5 365 aa13.89□□□□□ -0.19
USF1-202ENST00000368020 CFAP97Q9P2B7 532 aa13.89□□□□□ -0.19
USF1-202ENST00000368020 COLQQ9Y215 455 aaPredicted RBP13.89□□□□□ -0.19
USF1-202ENST00000368020 DHRS7Q9Y394 339 aa13.89□□□□□ -0.19
USF1-202ENST00000368020 VGLL3A8MV65 326 aa13.88□□□□□ -0.19
USF1-202ENST00000368020 NRP2O60462 931 aa13.88□□□□□ -0.19
USF1-202ENST00000368020 MATN4O95460 622 aa13.88□□□□□ -0.19
USF1-202ENST00000368020 ESRRBO95718 433 aa13.88□□□□□ -0.19
USF1-202ENST00000368020 S100BP04271 92 aaPredicted RBP13.88□□□□□ -0.19
USF1-202ENST00000368020 UROSP10746 265 aa13.88□□□□□ -0.19
USF1-202ENST00000368020 THOP1P52888 689 aa13.88□□□□□ -0.19
USF1-202ENST00000368020 SNRPD1P62314 119 aaKnown RBP13.88□□□□□ -0.19
USF1-202ENST00000368020 TRAP1Q12931 704 aaKnown RBP13.88□□□□□ -0.19
USF1-202ENST00000368020 GRAMD4Q6IC98 578 aa13.88□□□□□ -0.19
USF1-202ENST00000368020 METTL2BQ6P1Q9 378 aaKnown RBP13.88□□□□□ -0.19
USF1-202ENST00000368020 IZUMO2Q6UXV1 221 aa13.88□□□□□ -0.19
USF1-202ENST00000368020 GAREM2Q75VX8 874 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms