RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 ISCA2Q86U28 154 aa14.62□□□□□ -0.07
PRKN-204ENST00000366896 AQP12AQ8IXF9 295 aa14.62□□□□□ -0.07
PRKN-204ENST00000366896 CLYBLQ8N0X4 340 aa14.62□□□□□ -0.07
PRKN-204ENST00000366896 TRUB1Q8WWH5 349 aaKnown RBP14.62□□□□□ -0.07
PRKN-204ENST00000366896 HERVK_113Q902F9 699 aa14.62□□□□□ -0.07
PRKN-204ENST00000366896 ACDQ96AP0 544 aa14.62□□□□□ -0.07
PRKN-204ENST00000366896 C3orf30Q96M34 536 aa14.62□□□□□ -0.07
PRKN-204ENST00000366896 KLHL5Q96PQ7 755 aa14.62□□□□□ -0.07
PRKN-204ENST00000366896 YIPF2Q9BWQ6 316 aa14.62□□□□□ -0.07
PRKN-204ENST00000366896 TDRD1Q9BXT4 1180 aaKnown RBP14.62□□□□□ -0.07
PRKN-204ENST00000366896 POPDC3Q9HBV1 291 aa14.62□□□□□ -0.07
PRKN-204ENST00000366896 NT5MQ9NPB1 228 aa14.62□□□□□ -0.07
PRKN-204ENST00000366896 C8orf4Q9NR00 106 aa14.62□□□□□ -0.07
PRKN-204ENST00000366896 MARCH4Q9P2E8 410 aaPredicted RBP14.62□□□□□ -0.07
PRKN-204ENST00000366896 SLC30A1Q9Y6M5 507 aa14.62□□□□□ -0.07
PRKN-204ENST00000366896 DYTNA2CJ06 578 aa14.61□□□□□ -0.07
PRKN-204ENST00000366896 HTR3EA5X5Y0 456 aa14.61□□□□□ -0.07
PRKN-204ENST00000366896 TNFRSF10BO14763 440 aa14.61□□□□□ -0.07
PRKN-204ENST00000366896 ITGB1P05556 798 aa14.61□□□□□ -0.07
PRKN-204ENST00000366896 GPX3P22352 226 aa14.61□□□□□ -0.07
PRKN-204ENST00000366896 CD86P42081 329 aa14.61□□□□□ -0.07
PRKN-204ENST00000366896 OR1G1P47890 313 aa14.61□□□□□ -0.07
PRKN-204ENST00000366896 STX1BP61266 288 aa14.61□□□□□ -0.07
PRKN-204ENST00000366896 ACVR1Q04771 509 aa14.61□□□□□ -0.07
PRKN-204ENST00000366896 ATP6AP1Q15904 470 aa14.61□□□□□ -0.07
PRKN-204ENST00000366896 GPR158Q5T848 1215 aa14.61□□□□□ -0.07
PRKN-204ENST00000366896 ABRAXAS1Q6UWZ7 409 aa14.61□□□□□ -0.07
PRKN-204ENST00000366896 TFAP2DQ7Z6R9 452 aa14.61□□□□□ -0.07
PRKN-204ENST00000366896 TEX26Q8N6G2 289 aa14.61□□□□□ -0.07
PRKN-204ENST00000366896 C9orf16Q9BUW7 83 aa14.61□□□□□ -0.07
PRKN-204ENST00000366896 ARMC7Q9H6L4 198 aa14.61□□□□□ -0.07
PRKN-204ENST00000366896 NMUR1Q9HB89 426 aa14.61□□□□□ -0.07
PRKN-204ENST00000366896 NDUFAF1Q9Y375 327 aa14.61□□□□□ -0.07
PRKN-204ENST00000366896 PTGDR2Q9Y5Y4 395 aa14.61□□□□□ -0.07
PRKN-204ENST00000366896 PATJQ8NI35 1801 aa14.61□□□□□ -0.07
PRKN-204ENST00000366896 TMEM189-UBE2V1I3L0A0 370 aa14.61□□□□□ -0.07
PRKN-204ENST00000366896 J3KR12 359 aa14.61□□□□□ -0.07
PRKN-204ENST00000366896 S1PR4O95977 384 aa14.61□□□□□ -0.07
PRKN-204ENST00000366896 MRPL19P49406 292 aaKnown RBP14.61□□□□□ -0.07
PRKN-204ENST00000366896 SUOXP51687 545 aa14.61□□□□□ -0.07
PRKN-204ENST00000366896 HERVK_113P63132 956 aa14.61□□□□□ -0.07
PRKN-204ENST00000366896 DSC2Q02487 901 aa14.61□□□□□ -0.07
PRKN-204ENST00000366896 NFATC3Q12968 1075 aa14.61□□□□□ -0.07
PRKN-204ENST00000366896 KCTD8Q6ZWB6 473 aa14.61□□□□□ -0.07
PRKN-204ENST00000366896 FUNDC1Q8IVP5 155 aa14.61□□□□□ -0.07
PRKN-204ENST00000366896 TSPEARQ8WU66 669 aa14.61□□□□□ -0.07
PRKN-204ENST00000366896 EXT2Q93063 718 aa14.61□□□□□ -0.07
PRKN-204ENST00000366896 C19orf60Q96EN9 201 aa14.61□□□□□ -0.07
PRKN-204ENST00000366896 SLC45A3Q96JT2 553 aa14.61□□□□□ -0.07
PRKN-204ENST00000366896 SERPINB11Q96P15 392 aa14.61□□□□□ -0.07
PRKN-204ENST00000366896 TUBA1CQ9BQE3 449 aa14.61□□□□□ -0.07
PRKN-204ENST00000366896 CORO1BQ9BR76 489 aa14.61□□□□□ -0.07
PRKN-204ENST00000366896 TMEM175Q9BSA9 504 aa14.61□□□□□ -0.07
PRKN-204ENST00000366896 ERVK-6Q9BXR3 956 aa14.61□□□□□ -0.07
PRKN-204ENST00000366896 TRNAU1APQ9NX07 287 aaKnown RBP14.61□□□□□ -0.07
PRKN-204ENST00000366896 GIMAP2Q9UG22 337 aa14.61□□□□□ -0.07
PRKN-204ENST00000366896 B3GNT3Q9Y2A9 372 aa14.61□□□□□ -0.07
PRKN-204ENST00000366896 PRG3Q9Y2Y8 225 aaPredicted RBP14.61□□□□□ -0.07
PRKN-204ENST00000366896 KCTD3Q9Y597 815 aa14.61□□□□□ -0.07
PRKN-204ENST00000366896 DHRS12A0PJE2 317 aa14.6□□□□□ -0.07
PRKN-204ENST00000366896 J3QRK9 145 aa14.6□□□□□ -0.07
PRKN-204ENST00000366896 CLOCKO15516 846 aa14.6□□□□□ -0.07
PRKN-204ENST00000366896 MATN4O95460 622 aa14.6□□□□□ -0.07
PRKN-204ENST00000366896 ALDOCP09972 364 aaKnown RBP14.6□□□□□ -0.07
PRKN-204ENST00000366896 HSD17B1P14061 328 aa14.6□□□□□ -0.07
PRKN-204ENST00000366896 ETFBP38117 255 aa14.6□□□□□ -0.07
PRKN-204ENST00000366896 SLC11A1P49279 550 aa14.6□□□□□ -0.07
PRKN-204ENST00000366896 ITKQ08881 620 aa14.6□□□□□ -0.07
PRKN-204ENST00000366896 BNIP2Q12982 314 aa14.6□□□□□ -0.07
PRKN-204ENST00000366896 UNC50Q53HI1 259 aa14.6□□□□□ -0.07
PRKN-204ENST00000366896 PIK3R6Q5UE93 754 aa14.6□□□□□ -0.07
PRKN-204ENST00000366896 SPRED1Q7Z699 444 aa14.6□□□□□ -0.07
PRKN-204ENST00000366896 SLC15A3Q8IY34 581 aa14.6□□□□□ -0.07
PRKN-204ENST00000366896 MINDY1Q8N5J2 469 aa14.6□□□□□ -0.07
PRKN-204ENST00000366896 SLC15A4Q8N697 577 aa14.6□□□□□ -0.07
PRKN-204ENST00000366896 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.6□□□□□ -0.073e-8■■■■■ 70.6
PRKN-204ENST00000366896 FBXL8Q96CD0 374 aa14.6□□□□□ -0.07
PRKN-204ENST00000366896 FBXL20Q96IG2 436 aa14.6□□□□□ -0.07
PRKN-204ENST00000366896 LRCH3Q96II8 777 aa14.6□□□□□ -0.07
PRKN-204ENST00000366896 TRIM15Q9C019 465 aa14.6□□□□□ -0.07
PRKN-204ENST00000366896 CWH43Q9H720 699 aa14.6□□□□□ -0.07
PRKN-204ENST00000366896 RIMKLBQ9ULI2 386 aa14.6□□□□□ -0.07
PRKN-204ENST00000366896 AURKCQ9UQB9 309 aa14.6□□□□□ -0.07
PRKN-204ENST00000366896 ERGIC3Q9Y282 383 aa14.6□□□□□ -0.07
PRKN-204ENST00000366896 CORINQ9Y5Q5 1042 aa14.6□□□□□ -0.07
PRKN-204ENST00000366896 RNF103-CHMP3A0A140T963 221 aa14.6□□□□□ -0.07
PRKN-204ENST00000366896 FAM149AA5PLN7 773 aa14.6□□□□□ -0.07
PRKN-204ENST00000366896 E2F6O75461 281 aa14.6□□□□□ -0.07
PRKN-204ENST00000366896 SUPT7LO94864 414 aa14.6□□□□□ -0.07
PRKN-204ENST00000366896 RASAL1O95294 804 aa14.6□□□□□ -0.07
PRKN-204ENST00000366896 CLIC3O95833 236 aa14.6□□□□□ -0.07
PRKN-204ENST00000366896 MMP2P08253 660 aa14.6□□□□□ -0.07
PRKN-204ENST00000366896 SLC2A3P11169 496 aa14.6□□□□□ -0.07
PRKN-204ENST00000366896 ZNF182P17025 639 aaPredicted RBP14.6□□□□□ -0.07
PRKN-204ENST00000366896 RHOQP17081 205 aa14.6□□□□□ -0.07
PRKN-204ENST00000366896 FASP25445 335 aa14.6□□□□□ -0.07
PRKN-204ENST00000366896 CCT8P50990 548 aa14.6□□□□□ -0.07
PRKN-204ENST00000366896 FOXM1Q08050 763 aa14.6□□□□□ -0.07
PRKN-204ENST00000366896 SLC10A7Q0GE19 358 aa14.6□□□□□ -0.07
PRKN-204ENST00000366896 NR1D2Q14995 579 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms