RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 RPL34P49207 117 aaKnown RBP8□□□□□ -1.13
YBX3-204ENST00000366290 CARSP49589 748 aaKnown RBP8□□□□□ -1.13
YBX3-204ENST00000366290 CCR3P51677 355 aa8□□□□□ -1.13
YBX3-204ENST00000366290 BCAT1P54687 386 aa8□□□□□ -1.13
YBX3-204ENST00000366290 SLC8A3P57103 927 aa8□□□□□ -1.13
YBX3-204ENST00000366290 GOLGA8FQ08AF8 430 aa8□□□□□ -1.13
YBX3-204ENST00000366290 GOLGA8DPQ0D2H9 430 aa8□□□□□ -1.13
YBX3-204ENST00000366290 BST2Q10589 180 aaKnown RBP8□□□□□ -1.13
YBX3-204ENST00000366290 GRSF1Q12849 480 aaKnown RBP eCLIP8□□□□□ -1.13
YBX3-204ENST00000366290 PON2Q15165 354 aa8□□□□□ -1.13
YBX3-204ENST00000366290 GOLGA7BQ2TAP0 167 aa8□□□□□ -1.13
YBX3-204ENST00000366290 FBXO43Q4G163 708 aa8□□□□□ -1.13
YBX3-204ENST00000366290 DENND1BQ6P3S1 775 aa8□□□□□ -1.13
YBX3-204ENST00000366290 LCLAT1Q6UWP7 414 aa8□□□□□ -1.13
YBX3-204ENST00000366290 CACNA2D4Q7Z3S7 1137 aa8□□□□□ -1.13
YBX3-204ENST00000366290 SCD5Q86SK9 330 aa8□□□□□ -1.13
YBX3-204ENST00000366290 PIGZQ86VD9 579 aa8□□□□□ -1.13
YBX3-204ENST00000366290 KIAA2013Q8IYS2 634 aa8□□□□□ -1.13
YBX3-204ENST00000366290 ARHGAP18Q8N392 663 aa8□□□□□ -1.13
YBX3-204ENST00000366290 WDTC1Q8N5D0 677 aa8□□□□□ -1.13
YBX3-204ENST00000366290 Q8NA96 180 aa8□□□□□ -1.13
YBX3-204ENST00000366290 SLC20A1Q8WUM9 679 aa8□□□□□ -1.13
YBX3-204ENST00000366290 SLC35F5Q8WV83 523 aa8□□□□□ -1.13
YBX3-204ENST00000366290 SPSB4Q96A44 273 aa8□□□□□ -1.13
YBX3-204ENST00000366290 SPAG5Q96R06 1193 aa8□□□□□ -1.13
YBX3-204ENST00000366290 P2RY13Q9BPV8 354 aa8□□□□□ -1.13
YBX3-204ENST00000366290 NUP58Q9BVL2 599 aa8□□□□□ -1.13
YBX3-204ENST00000366290 GRPEL1Q9HAV7 217 aa8□□□□□ -1.13
YBX3-204ENST00000366290 NMUR1Q9HB89 426 aa8□□□□□ -1.13
YBX3-204ENST00000366290 ARFGAP3Q9NP61 516 aa8□□□□□ -1.13
YBX3-204ENST00000366290 ZSCAN32Q9NX65 697 aa8□□□□□ -1.13
YBX3-204ENST00000366290 DLL3Q9NYJ7 618 aa8□□□□□ -1.13
YBX3-204ENST00000366290 AIPL1Q9NZN9 384 aa8□□□□□ -1.13
YBX3-204ENST00000366290 CYTH4Q9UIA0 394 aa8□□□□□ -1.13
YBX3-204ENST00000366290 KCNE5Q9UJ90 142 aa8□□□□□ -1.13
YBX3-204ENST00000366290 NEU2Q9Y3R4 380 aa8□□□□□ -1.13
YBX3-204ENST00000366290 TESMINQ9Y4I5 508 aa8□□□□□ -1.13
YBX3-204ENST00000366290 RAD54BQ9Y620 910 aa8□□□□□ -1.13
YBX3-204ENST00000366290 SPTBN2O15020 2390 aa8□□□□□ -1.13
YBX3-204ENST00000366290 SDK1Q7Z5N4 2213 aa7.99□□□□□ -1.13
YBX3-204ENST00000366290 THAP12O43422 761 aa7.99□□□□□ -1.13
YBX3-204ENST00000366290 RASSF9O75901 435 aa7.99□□□□□ -1.13
YBX3-204ENST00000366290 NCR1O76036 304 aa7.99□□□□□ -1.13
YBX3-204ENST00000366290 TBX18O95935 607 aa7.99□□□□□ -1.13
YBX3-204ENST00000366290 TGM1P22735 817 aa7.99□□□□□ -1.13
YBX3-204ENST00000366290 HNRNPH3P31942 346 aaKnown RBP7.99□□□□□ -1.13
YBX3-204ENST00000366290 CASP14P31944 242 aa7.99□□□□□ -1.13
YBX3-204ENST00000366290 CDH5P33151 784 aaPredicted RBP7.99□□□□□ -1.13
YBX3-204ENST00000366290 OPRD1P41143 372 aa7.99□□□□□ -1.13
YBX3-204ENST00000366290 PRKCIP41743 596 aa7.99□□□□□ -1.13
YBX3-204ENST00000366290 GPD2P43304 727 aa7.99□□□□□ -1.13
YBX3-204ENST00000366290 CXCL12P48061 93 aa7.99□□□□□ -1.13
YBX3-204ENST00000366290 ZBED6P86452 979 aa7.99□□□□□ -1.13
YBX3-204ENST00000366290 MC2RQ01718 297 aa7.99□□□□□ -1.13
YBX3-204ENST00000366290 CSTF1Q05048 431 aaKnown RBP7.99□□□□□ -1.13
YBX3-204ENST00000366290 B3GNTL1Q67FW5 361 aaPredicted RBP7.99□□□□□ -1.13
YBX3-204ENST00000366290 RHBDF2Q6PJF5 856 aa7.99□□□□□ -1.13
YBX3-204ENST00000366290 WDR59Q6PJI9 974 aa7.99□□□□□ -1.13
YBX3-204ENST00000366290 Q6ZS52 159 aa7.99□□□□□ -1.13
YBX3-204ENST00000366290 BHLHA9Q7RTU4 235 aa7.99□□□□□ -1.13
YBX3-204ENST00000366290 TADA2BQ86TJ2 420 aa7.99□□□□□ -1.13
YBX3-204ENST00000366290 TMEM132CQ8N3T6 1108 aa7.99□□□□□ -1.13
YBX3-204ENST00000366290 CCDC26Q8TAB7 109 aa7.99□□□□□ -1.13
YBX3-204ENST00000366290 IL17DQ8TAD2 202 aa7.99□□□□□ -1.13
YBX3-204ENST00000366290 UBA3Q8TBC4 463 aa7.99□□□□□ -1.13
YBX3-204ENST00000366290 SECISBP2LQ93073 1101 aaKnown RBP7.99□□□□□ -1.13
YBX3-204ENST00000366290 PCDHB18PQ96TA0 734 aa7.99□□□□□ -1.13
YBX3-204ENST00000366290 HEPHQ9BQS7 1158 aa7.99□□□□□ -1.13
YBX3-204ENST00000366290 MESP1Q9BRJ9 268 aa7.99□□□□□ -1.13
YBX3-204ENST00000366290 FBRSL1Q9HCM7 1045 aaKnown RBP7.99□□□□□ -1.13
YBX3-204ENST00000366290 MYO1AQ9UBC5 1043 aa7.99□□□□□ -1.13
YBX3-204ENST00000366290 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.99□□□□□ -1.13
YBX3-204ENST00000366290 PCDHGB2Q9Y5G2 931 aa7.99□□□□□ -1.13
YBX3-204ENST00000366290 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.99□□□□□ -1.13
YBX3-204ENST00000366290 TPRP12270 2363 aaKnown RBP7.98□□□□□ -1.13
YBX3-204ENST00000366290 GAGE12BA1L429 117 aa7.98□□□□□ -1.13
YBX3-204ENST00000366290 GAGE12HA6NDE8 117 aa7.98□□□□□ -1.13
YBX3-204ENST00000366290 GOLGA6L3A6NEY3 463 aa7.98□□□□□ -1.13
YBX3-204ENST00000366290 M0QYV0 167 aa7.98□□□□□ -1.13
YBX3-204ENST00000366290 RNASET2O00584 256 aaKnown RBP7.98□□□□□ -1.13
YBX3-204ENST00000366290 TOR1BO14657 336 aa7.98□□□□□ -1.13
YBX3-204ENST00000366290 HOXC11O43248 304 aaPredicted RBP7.98□□□□□ -1.13
YBX3-204ENST00000366290 ATG13O75143 517 aa7.98□□□□□ -1.13
YBX3-204ENST00000366290 ZFPL1O95159 310 aa7.98□□□□□ -1.13
YBX3-204ENST00000366290 PLEKP08567 350 aaPredicted RBP7.98□□□□□ -1.13
YBX3-204ENST00000366290 ATXN1LP0C7T5 689 aaKnown RBP7.98□□□□□ -1.13
YBX3-204ENST00000366290 RALAP11233 206 aa7.98□□□□□ -1.13
YBX3-204ENST00000366290 SKILP12757 684 aa7.98□□□□□ -1.13
YBX3-204ENST00000366290 RARGP13631 454 aa7.98□□□□□ -1.13
YBX3-204ENST00000366290 FERP16591 822 aa7.98□□□□□ -1.13
YBX3-204ENST00000366290 KRT9P35527 623 aa7.98□□□□□ -1.13
YBX3-204ENST00000366290 TKTL1P51854 596 aa7.98□□□□□ -1.13
YBX3-204ENST00000366290 CXADRP78310 365 aa7.98□□□□□ -1.13
YBX3-204ENST00000366290 SATB1Q01826 763 aa7.98□□□□□ -1.13
YBX3-204ENST00000366290 CDR2Q01850 454 aa7.98□□□□□ -1.13
YBX3-204ENST00000366290 TRIM14Q14142 442 aa7.98□□□□□ -1.13
YBX3-204ENST00000366290 ASIC2Q16515 512 aa7.98□□□□□ -1.13
YBX3-204ENST00000366290 ARL13BQ3SXY8 428 aa7.98□□□□□ -1.13
YBX3-204ENST00000366290 TAF3Q5VWG9 929 aa7.98□□□□□ -1.13
YBX3-204ENST00000366290 PMF1Q6P1K2 205 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms