RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 PMS2CLQ68D20 193 aa3.08□□□□□ -1.92
RNU4-48P-201ENST00000365559 KLHL35Q6PF15 583 aa3.08□□□□□ -1.92
RNU4-48P-201ENST00000365559 ZNF852Q6ZMS4 543 aa3.08□□□□□ -1.92
RNU4-48P-201ENST00000365559 Q75L30 129 aa3.08□□□□□ -1.92
RNU4-48P-201ENST00000365559 MARK2Q7KZI7 788 aaKnown RBP3.08□□□□□ -1.92
RNU4-48P-201ENST00000365559 CTAGE4Q8IX94 777 aa3.08□□□□□ -1.92
RNU4-48P-201ENST00000365559 TEX19Q8NA77 164 aa3.08□□□□□ -1.92
RNU4-48P-201ENST00000365559 SLC24A4Q8NFF2 622 aa3.08□□□□□ -1.92
RNU4-48P-201ENST00000365559 DMBX1Q8NFW5 382 aa3.08□□□□□ -1.92
RNU4-48P-201ENST00000365559 OR52I2Q8NH67 350 aa3.08□□□□□ -1.92
RNU4-48P-201ENST00000365559 UTP15Q8TED0 518 aaKnown RBP3.08□□□□□ -1.92
RNU4-48P-201ENST00000365559 USP6NLQ92738 828 aa3.08□□□□□ -1.92
RNU4-48P-201ENST00000365559 ALG14Q96F25 216 aa3.08□□□□□ -1.92
RNU4-48P-201ENST00000365559 CMTM3Q96MX0 182 aa3.08□□□□□ -1.92
RNU4-48P-201ENST00000365559 ZNF583Q96ND8 569 aa3.08□□□□□ -1.92
RNU4-48P-201ENST00000365559 NAP1L4Q99733 375 aaKnown RBP3.08□□□□□ -1.92
RNU4-48P-201ENST00000365559 NEURL2Q9BR09 285 aa3.08□□□□□ -1.92
RNU4-48P-201ENST00000365559 LRRC1Q9BTT6 524 aa3.08□□□□□ -1.92
RNU4-48P-201ENST00000365559 SIL1Q9H173 461 aa3.08□□□□□ -1.92
RNU4-48P-201ENST00000365559 EPB41L5Q9HCM4 733 aa3.08□□□□□ -1.92
RNU4-48P-201ENST00000365559 KLHL9Q9P2J3 617 aa3.08□□□□□ -1.92
RNU4-48P-201ENST00000365559 UBA2Q9UBT2 640 aaPredicted RBP3.08□□□□□ -1.92
RNU4-48P-201ENST00000365559 FAM172BPA6NC97 362 aa3.07□□□□□ -1.92
RNU4-48P-201ENST00000365559 OR5K3A6NET4 321 aa3.07□□□□□ -1.92
RNU4-48P-201ENST00000365559 C5orf60A6NFR6 353 aa3.07□□□□□ -1.92
RNU4-48P-201ENST00000365559 A8MZ25 164 aa3.07□□□□□ -1.92
RNU4-48P-201ENST00000365559 F5H0A9 414 aaPredicted RBP3.07□□□□□ -1.92
RNU4-48P-201ENST00000365559 TMEM178BH3BS89 294 aa3.07□□□□□ -1.92
RNU4-48P-201ENST00000365559 FGF17O60258 216 aa3.07□□□□□ -1.92
RNU4-48P-201ENST00000365559 DAB1O75553 588 aa3.07□□□□□ -1.92
RNU4-48P-201ENST00000365559 OR2C1O95371 312 aa3.07□□□□□ -1.92
RNU4-48P-201ENST00000365559 SCGB1D1O95968 90 aa3.07□□□□□ -1.92
RNU4-48P-201ENST00000365559 SP1P08047 785 aa3.07□□□□□ -1.92
RNU4-48P-201ENST00000365559 CD53P19397 219 aa3.07□□□□□ -1.92
RNU4-48P-201ENST00000365559 ANXA7P20073 488 aaKnown RBP3.07□□□□□ -1.92
RNU4-48P-201ENST00000365559 NR1D1P20393 614 aa3.07□□□□□ -1.92
RNU4-48P-201ENST00000365559 ARL3P36405 182 aa3.07□□□□□ -1.92
RNU4-48P-201ENST00000365559 ARCN1P48444 511 aaKnown RBP3.07□□□□□ -1.92
RNU4-48P-201ENST00000365559 EEF1A1P68104 462 aaKnown RBP3.07□□□□□ -1.92
RNU4-48P-201ENST00000365559 RPL24P83731 157 aaKnown RBP3.07□□□□□ -1.92
RNU4-48P-201ENST00000365559 PLIN5Q00G26 463 aa3.07□□□□□ -1.92
RNU4-48P-201ENST00000365559 TFAP4Q01664 338 aa3.07□□□□□ -1.92
RNU4-48P-201ENST00000365559 SREBF2Q12772 1141 aa3.07□□□□□ -1.92
RNU4-48P-201ENST00000365559 MAMLD1Q13495 774 aa3.07□□□□□ -1.92
RNU4-48P-201ENST00000365559 ASTE1Q2TB18 679 aaPredicted RBP3.07□□□□□ -1.92
RNU4-48P-201ENST00000365559 ZSCAN23Q3MJ62 389 aa3.07□□□□□ -1.92
RNU4-48P-201ENST00000365559 SIRPB2Q5JXA9 342 aa3.07□□□□□ -1.92
RNU4-48P-201ENST00000365559 EEF1A1P5Q5VTE0 462 aa3.07□□□□□ -1.92
RNU4-48P-201ENST00000365559 TMEM198Q66K66 360 aa3.07□□□□□ -1.92
RNU4-48P-201ENST00000365559 C19orf48Q6RUI8 117 aa3.07□□□□□ -1.92
RNU4-48P-201ENST00000365559 ZNF704Q6ZNC4 412 aaPredicted RBP3.07□□□□□ -1.92
RNU4-48P-201ENST00000365559 CFAP77Q6ZQR2 320 aa3.07□□□□□ -1.92
RNU4-48P-201ENST00000365559 C1orf122Q6ZSJ8 110 aa3.07□□□□□ -1.92
RNU4-48P-201ENST00000365559 SLC26A9Q7LBE3 791 aa3.07□□□□□ -1.92
RNU4-48P-201ENST00000365559 CCDC190Q86UF4 302 aa3.07□□□□□ -1.92
RNU4-48P-201ENST00000365559 NFE4Q86UQ8 179 aa3.07□□□□□ -1.92
RNU4-48P-201ENST00000365559 LRRC8CQ8TDW0 803 aa3.07□□□□□ -1.92
RNU4-48P-201ENST00000365559 DNAAF4Q8WXU2 420 aa3.07□□□□□ -1.92
RNU4-48P-201ENST00000365559 LINGO1Q96FE5 620 aa3.07□□□□□ -1.92
RNU4-48P-201ENST00000365559 NEUROD6Q96NK8 337 aa3.07□□□□□ -1.92
RNU4-48P-201ENST00000365559 PGLYRP2Q96PD5 576 aa3.07□□□□□ -1.92
RNU4-48P-201ENST00000365559 UHRF2Q96PU4 802 aa3.07□□□□□ -1.92
RNU4-48P-201ENST00000365559 OR2A14Q96R47 310 aa3.07□□□□□ -1.92
RNU4-48P-201ENST00000365559 CHMP4AQ9BY43 222 aa3.07□□□□□ -1.92
RNU4-48P-201ENST00000365559 VPS33BQ9H267 617 aa3.07□□□□□ -1.92
RNU4-48P-201ENST00000365559 LRMDAQ9H2I8 198 aa3.07□□□□□ -1.92
RNU4-48P-201ENST00000365559 KAT14Q9H8E8 782 aa3.07□□□□□ -1.92
RNU4-48P-201ENST00000365559 TCP11L1Q9NUJ3 509 aa3.07□□□□□ -1.92
RNU4-48P-201ENST00000365559 SEPT11Q9NVA2 429 aaKnown RBP3.07□□□□□ -1.92
RNU4-48P-201ENST00000365559 HCFC1R1Q9NWW0 138 aa3.07□□□□□ -1.92
RNU4-48P-201ENST00000365559 FAF1Q9UNN5 650 aaPredicted RBP3.07□□□□□ -1.92
RNU4-48P-201ENST00000365559 MTMR6Q9Y217 621 aa3.07□□□□□ -1.92
RNU4-48P-201ENST00000365559 B3GALT5Q9Y2C3 310 aa3.07□□□□□ -1.92
RNU4-48P-201ENST00000365559 PRAG1Q86YV5 1406 aa3.07□□□□□ -1.92
RNU4-48P-201ENST00000365559 PRR23AA6NEV1 266 aa3.06□□□□□ -1.92
RNU4-48P-201ENST00000365559 MYO1GB0I1T2 1018 aa3.06□□□□□ -1.92
RNU4-48P-201ENST00000365559 ERVV-2B6SEH9 535 aa3.06□□□□□ -1.92
RNU4-48P-201ENST00000365559 DVL1O14640 695 aa3.06□□□□□ -1.92
RNU4-48P-201ENST00000365559 MAP2K7O14733 419 aa3.06□□□□□ -1.92
RNU4-48P-201ENST00000365559 OGG1O15527 345 aa3.06□□□□□ -1.92
RNU4-48P-201ENST00000365559 KRT86O43790 486 aa3.06□□□□□ -1.92
RNU4-48P-201ENST00000365559 SLC22A3O75751 556 aa3.06□□□□□ -1.92
RNU4-48P-201ENST00000365559 BAIAP3O94812 1187 aa3.06□□□□□ -1.92
RNU4-48P-201ENST00000365559 ACADMP11310 421 aa3.06□□□□□ -1.92
RNU4-48P-201ENST00000365559 CAPN3P20807 821 aa3.06□□□□□ -1.92
RNU4-48P-201ENST00000365559 HRH2P25021 359 aa3.06□□□□□ -1.92
RNU4-48P-201ENST00000365559 TM4SF1P30408 202 aa3.06□□□□□ -1.92
RNU4-48P-201ENST00000365559 GPR143P51810 404 aa3.06□□□□□ -1.92
RNU4-48P-201ENST00000365559 DVL1P1P54792 670 aaPredicted RBP3.06□□□□□ -1.92
RNU4-48P-201ENST00000365559 LINC01547P58512 204 aaPredicted RBP3.06□□□□□ -1.92
RNU4-48P-201ENST00000365559 PHEXP78562 749 aa3.06□□□□□ -1.92
RNU4-48P-201ENST00000365559 SPOCK1Q08629 439 aa3.06□□□□□ -1.92
RNU4-48P-201ENST00000365559 KRT81Q14533 505 aa3.06□□□□□ -1.92
RNU4-48P-201ENST00000365559 PDSS1Q5T2R2 415 aa3.06□□□□□ -1.92
RNU4-48P-201ENST00000365559 GFI1BQ5VTD9 330 aa3.06□□□□□ -1.92
RNU4-48P-201ENST00000365559 ACSM2BQ68CK6 577 aa3.06□□□□□ -1.92
RNU4-48P-201ENST00000365559 KIAA0930Q6ICG6 404 aaPredicted RBP3.06□□□□□ -1.92
RNU4-48P-201ENST00000365559 JADE1Q6IE81 842 aa3.06□□□□□ -1.92
RNU4-48P-201ENST00000365559 SARM1Q6SZW1 724 aa3.06□□□□□ -1.92
RNU4-48P-201ENST00000365559 PM20D2Q8IYS1 436 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms