RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 ZG16O60844 167 aa4.3□□□□□ -1.72
RNU4-28P-201ENST00000364739 EIF2S1P05198 315 aaKnown RBP4.3□□□□□ -1.72
RNU4-28P-201ENST00000364739 PRSS1P07477 247 aa4.3□□□□□ -1.72
RNU4-28P-201ENST00000364739 HSPA1AP0DMV8 641 aaKnown RBP4.3□□□□□ -1.72
RNU4-28P-201ENST00000364739 HSPA1BP0DMV9 641 aaKnown RBP4.3□□□□□ -1.72
RNU4-28P-201ENST00000364739 BSGP35613 385 aa4.3□□□□□ -1.72
RNU4-28P-201ENST00000364739 GOLGA8DPQ0D2H9 430 aa4.3□□□□□ -1.72
RNU4-28P-201ENST00000364739 SREBF2Q12772 1141 aa4.3□□□□□ -1.72
RNU4-28P-201ENST00000364739 PDE1CQ14123 709 aaPredicted RBP4.3□□□□□ -1.72
RNU4-28P-201ENST00000364739 MYLK3Q32MK0 819 aa4.3□□□□□ -1.72
RNU4-28P-201ENST00000364739 HSP90AB4PQ58FF6 505 aa4.3□□□□□ -1.72
RNU4-28P-201ENST00000364739 TMEM198Q66K66 360 aa4.3□□□□□ -1.72
RNU4-28P-201ENST00000364739 HAUS3Q68CZ6 603 aa4.3□□□□□ -1.72
RNU4-28P-201ENST00000364739 PIWIL4Q7Z3Z4 852 aaKnown RBP4.3□□□□□ -1.72
RNU4-28P-201ENST00000364739 HJURPQ8NCD3 748 aaPredicted RBP4.3□□□□□ -1.72
RNU4-28P-201ENST00000364739 TMEM255BQ8WV15 326 aa4.3□□□□□ -1.72
RNU4-28P-201ENST00000364739 PHF21AQ96BD5 680 aa4.3□□□□□ -1.72
RNU4-28P-201ENST00000364739 ZNF501Q96CX3 271 aaPredicted RBP4.3□□□□□ -1.72
RNU4-28P-201ENST00000364739 OXNAD1Q96HP4 312 aaPredicted RBP4.3□□□□□ -1.72
RNU4-28P-201ENST00000364739 ZNF354BQ96LW1 612 aa4.3□□□□□ -1.72
RNU4-28P-201ENST00000364739 FKRPQ9H9S5 495 aa4.3□□□□□ -1.72
RNU4-28P-201ENST00000364739 UPF2Q9HAU5 1272 aaKnown RBP4.3□□□□□ -1.72
RNU4-28P-201ENST00000364739 TRPC7Q9HCX4 862 aa4.3□□□□□ -1.72
RNU4-28P-201ENST00000364739 RRP7BPQ9NSQ0 103 aa4.3□□□□□ -1.72
RNU4-28P-201ENST00000364739 HCFC1R1Q9NWW0 138 aa4.3□□□□□ -1.72
RNU4-28P-201ENST00000364739 MAP3K20Q9NYL2 800 aaKnown RBP4.3□□□□□ -1.72
RNU4-28P-201ENST00000364739 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.3□□□□□ -1.72
RNU4-28P-201ENST00000364739 ORC3Q9UBD5 711 aaPredicted RBP4.3□□□□□ -1.72
RNU4-28P-201ENST00000364739 AASSQ9UDR5 926 aa4.3□□□□□ -1.72
RNU4-28P-201ENST00000364739 IGLV5-45A0A087WSX0 123 aa4.29□□□□□ -1.72
RNU4-28P-201ENST00000364739 CTSVO60911 334 aa4.29□□□□□ -1.72
RNU4-28P-201ENST00000364739 KRT19P08727 400 aa4.29□□□□□ -1.72
RNU4-28P-201ENST00000364739 PIK3CAP42336 1068 aa4.29□□□□□ -1.72
RNU4-28P-201ENST00000364739 TERF1P54274 439 aa4.29□□□□□ -1.72
RNU4-28P-201ENST00000364739 TAS2R40P59535 323 aa4.29□□□□□ -1.72
RNU4-28P-201ENST00000364739 NIPAL4Q0D2K0 466 aa4.29□□□□□ -1.72
RNU4-28P-201ENST00000364739 KRT32Q14532 448 aa4.29□□□□□ -1.72
RNU4-28P-201ENST00000364739 ZNF704Q6ZNC4 412 aaPredicted RBP4.29□□□□□ -1.72
RNU4-28P-201ENST00000364739 TMTC3Q6ZXV5 915 aa4.29□□□□□ -1.72
RNU4-28P-201ENST00000364739 ARHGAP12Q8IWW6 846 aa4.29□□□□□ -1.72
RNU4-28P-201ENST00000364739 PDILTQ8N807 584 aa4.29□□□□□ -1.72
RNU4-28P-201ENST00000364739 KLHDC9Q8NEP7 349 aa4.29□□□□□ -1.72
RNU4-28P-201ENST00000364739 DDX43Q9NXZ2 648 aaKnown RBP4.29□□□□□ -1.72
RNU4-28P-201ENST00000364739 PTTG2Q9NZH5 202 aa4.29□□□□□ -1.72
RNU4-28P-201ENST00000364739 CWC15Q9P013 229 aaKnown RBP4.29□□□□□ -1.72
RNU4-28P-201ENST00000364739 POLG2Q9UHN1 485 aa4.29□□□□□ -1.72
RNU4-28P-201ENST00000364739 CORO1CQ9ULV4 474 aaPredicted RBP4.29□□□□□ -1.72
RNU4-28P-201ENST00000364739 B4E171 279 aa4.28□□□□□ -1.72
RNU4-28P-201ENST00000364739 SYNGR3O43761 229 aa4.28□□□□□ -1.72
RNU4-28P-201ENST00000364739 SYNCRIPO60506 623 aaKnown RBP4.28□□□□□ -1.72
RNU4-28P-201ENST00000364739 IGHV4-39P01824 125 aa4.28□□□□□ -1.72
RNU4-28P-201ENST00000364739 GM2AP17900 193 aa4.28□□□□□ -1.72
RNU4-28P-201ENST00000364739 ANOS1P23352 680 aa4.28□□□□□ -1.72
RNU4-28P-201ENST00000364739 CDKN1AP38936 164 aa4.28□□□□□ -1.72
RNU4-28P-201ENST00000364739 TSPAN7P41732 249 aa4.28□□□□□ -1.72
RNU4-28P-201ENST00000364739 HOXA1P49639 335 aaPredicted RBP4.28□□□□□ -1.72
RNU4-28P-201ENST00000364739 MMP14P50281 582 aa4.28□□□□□ -1.72
RNU4-28P-201ENST00000364739 GKAP1Q5VSY0 366 aaPredicted RBP4.28□□□□□ -1.72
RNU4-28P-201ENST00000364739 PLXDC2Q6UX71 529 aa4.28□□□□□ -1.72
RNU4-28P-201ENST00000364739 ANO5Q75V66 913 aa4.28□□□□□ -1.72
RNU4-28P-201ENST00000364739 PXKQ7Z7A4 578 aa4.28□□□□□ -1.72
RNU4-28P-201ENST00000364739 CCDC190Q86UF4 302 aa4.28□□□□□ -1.72
RNU4-28P-201ENST00000364739 GBGT1Q8N5D6 347 aa4.28□□□□□ -1.72
RNU4-28P-201ENST00000364739 EMC1Q8N766 993 aa4.28□□□□□ -1.72
RNU4-28P-201ENST00000364739 DNAAF4Q8WXU2 420 aa4.28□□□□□ -1.72
RNU4-28P-201ENST00000364739 ARHGEF2Q92974 986 aaKnown RBP4.28□□□□□ -1.72
RNU4-28P-201ENST00000364739 ZNF524Q96C55 264 aa4.28□□□□□ -1.72
RNU4-28P-201ENST00000364739 ELMOD3Q96FG2 381 aa4.28□□□□□ -1.72
RNU4-28P-201ENST00000364739 C1orf74Q96LT6 269 aa4.28□□□□□ -1.72
RNU4-28P-201ENST00000364739 GAD1Q99259 594 aa4.28□□□□□ -1.72
RNU4-28P-201ENST00000364739 SEPT5Q99719 369 aaPredicted RBP4.28□□□□□ -1.72
RNU4-28P-201ENST00000364739 TFB2MQ9H5Q4 396 aaKnown RBP4.28□□□□□ -1.72
RNU4-28P-201ENST00000364739 ZNF696Q9H7X3 374 aa4.28□□□□□ -1.72
RNU4-28P-201ENST00000364739 SETD4Q9NVD3 440 aa4.28□□□□□ -1.72
RNU4-28P-201ENST00000364739 EHD2Q9NZN4 543 aa4.28□□□□□ -1.72
RNU4-28P-201ENST00000364739 TCF19Q9Y242 345 aa4.28□□□□□ -1.72
RNU4-28P-201ENST00000364739 PMS2P5A8MQ11 134 aa4.27□□□□□ -1.73
RNU4-28P-201ENST00000364739 NDUFS3O75489 264 aa4.27□□□□□ -1.73
RNU4-28P-201ENST00000364739 RNASEH2AO75792 299 aaKnown RBP4.27□□□□□ -1.73
RNU4-28P-201ENST00000364739 MBD4O95243 580 aa4.27□□□□□ -1.73
RNU4-28P-201ENST00000364739 ANXA7P20073 488 aaKnown RBP4.27□□□□□ -1.73
RNU4-28P-201ENST00000364739 HRH2P25021 359 aa4.27□□□□□ -1.73
RNU4-28P-201ENST00000364739 MAPK4P31152 587 aa4.27□□□□□ -1.73
RNU4-28P-201ENST00000364739 AHRP35869 848 aa4.27□□□□□ -1.73
RNU4-28P-201ENST00000364739 DCTP40126 519 aa4.27□□□□□ -1.73
RNU4-28P-201ENST00000364739 MRPS34P82930 218 aaKnown RBP4.27□□□□□ -1.73
RNU4-28P-201ENST00000364739 ZSCAN23Q3MJ62 389 aa4.27□□□□□ -1.73
RNU4-28P-201ENST00000364739 CEP85LQ5SZL2 805 aa4.27□□□□□ -1.73
RNU4-28P-201ENST00000364739 GLDNQ6ZMI3 551 aaPredicted RBP4.27□□□□□ -1.73
RNU4-28P-201ENST00000364739 Q75L30 129 aa4.27□□□□□ -1.73
RNU4-28P-201ENST00000364739 SLC5A8Q8N695 610 aa4.27□□□□□ -1.73
RNU4-28P-201ENST00000364739 STAMBPL1Q96FJ0 436 aa4.27□□□□□ -1.73
RNU4-28P-201ENST00000364739 C7orf26Q96N11 449 aa4.27□□□□□ -1.73
RNU4-28P-201ENST00000364739 EPB41L5Q9HCM4 733 aa4.27□□□□□ -1.73
RNU4-28P-201ENST00000364739 SMC4Q9NTJ3 1288 aa4.27□□□□□ -1.73
RNU4-28P-201ENST00000364739 FAM118AQ9NWS6 357 aa4.27□□□□□ -1.73
RNU4-28P-201ENST00000364739 LIPT2A6NK58 231 aa4.26□□□□□ -1.73
RNU4-28P-201ENST00000364739 FAM72CH0Y354 149 aa4.26□□□□□ -1.73
RNU4-28P-201ENST00000364739 HCRTR2O43614 444 aa4.26□□□□□ -1.73
RNU4-28P-201ENST00000364739 CIDEAO60543 219 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms