RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 KIAA0100Q14667 2235 aaKnown RBP22.43■■□□□ 1.18
LDB1-201ENST00000361198 CLASP2O75122 1294 aaKnown RBP22.42■■□□□ 1.18
LDB1-201ENST00000361198 TIMP1P01033 207 aa22.42■■□□□ 1.18
LDB1-201ENST00000361198 PYGLP06737 847 aa22.42■■□□□ 1.18
LDB1-201ENST00000361198 PPM1AP35813 382 aa22.42■■□□□ 1.18
LDB1-201ENST00000361198 PSME3P61289 254 aa22.42■■□□□ 1.18
LDB1-201ENST00000361198 ATP6V0D1P61421 351 aa22.42■■□□□ 1.18
LDB1-201ENST00000361198 LRP8Q14114 963 aa22.42■■□□□ 1.18
LDB1-201ENST00000361198 SQLEQ14534 574 aa22.42■■□□□ 1.18
LDB1-201ENST00000361198 MAPRE2Q15555 327 aa22.42■■□□□ 1.18
LDB1-201ENST00000361198 ARMC12Q5T9G4 340 aa22.42■■□□□ 1.18
LDB1-201ENST00000361198 TPGS1Q6ZTW0 290 aa22.42■■□□□ 1.18
LDB1-201ENST00000361198 LARP4Q71RC2 724 aaKnown RBP eCLIP22.42■■□□□ 1.182e-6■□□□□ 10.6
LDB1-201ENST00000361198 LYSMD3Q7Z3D4 306 aa22.42■■□□□ 1.18
LDB1-201ENST00000361198 PIH1D2Q8WWB5 315 aa22.42■■□□□ 1.18
LDB1-201ENST00000361198 GPR63Q9BZJ6 419 aa22.42■■□□□ 1.18
LDB1-201ENST00000361198 EVLQ9UI08 416 aaPredicted RBP22.42■■□□□ 1.18
LDB1-201ENST00000361198 VPS26AO75436 327 aa22.42■■□□□ 1.18
LDB1-201ENST00000361198 GPC4O75487 556 aa22.42■■□□□ 1.18
LDB1-201ENST00000361198 ECI2O75521 394 aa22.42■■□□□ 1.18
LDB1-201ENST00000361198 PGLSO95336 258 aa22.42■■□□□ 1.18
LDB1-201ENST00000361198 TSPAN12O95859 305 aa22.42■■□□□ 1.18
LDB1-201ENST00000361198 HMGCLP35914 325 aa22.42■■□□□ 1.18
LDB1-201ENST00000361198 HSPA13P48723 471 aa22.42■■□□□ 1.18
LDB1-201ENST00000361198 FOXA1P55317 472 aa22.42■■□□□ 1.18
LDB1-201ENST00000361198 AP1S1P61966 158 aa22.42■■□□□ 1.18
LDB1-201ENST00000361198 TRIM25Q14258 630 aaKnown RBP22.42■■□□□ 1.18
LDB1-201ENST00000361198 HTR3DQ70Z44 454 aa22.42■■□□□ 1.18
LDB1-201ENST00000361198 TAS2R42Q7RTR8 314 aa22.42■■□□□ 1.18
LDB1-201ENST00000361198 SATL1Q86VE3 508 aa22.42■■□□□ 1.18
LDB1-201ENST00000361198 NKAPQ8N5F7 415 aaKnown RBP22.42■■□□□ 1.18
LDB1-201ENST00000361198 TRPC4APQ8TEL6 797 aa22.42■■□□□ 1.18
LDB1-201ENST00000361198 FUBP1Q96AE4 644 aaKnown RBP22.42■■□□□ 1.18
LDB1-201ENST00000361198 C19orf60Q96EN9 201 aa22.42■■□□□ 1.18
LDB1-201ENST00000361198 MYO19Q96H55 970 aa22.42■■□□□ 1.18
LDB1-201ENST00000361198 ASB2Q96Q27 587 aa22.42■■□□□ 1.18
LDB1-201ENST00000361198 MAGEE1Q9HCI5 957 aa22.42■■□□□ 1.18
LDB1-201ENST00000361198 EPS15L1Q9UBC2 864 aa22.42■■□□□ 1.18
LDB1-201ENST00000361198 PKP3Q9Y446 797 aa22.42■■□□□ 1.18
LDB1-201ENST00000361198 NPEPPSL1A6NEC2 478 aa22.41■■□□□ 1.18
LDB1-201ENST00000361198 PFDN6O15212 129 aa22.41■■□□□ 1.18
LDB1-201ENST00000361198 GKP32189 559 aa22.41■■□□□ 1.18
LDB1-201ENST00000361198 CLCN4P51793 760 aa22.41■■□□□ 1.18
LDB1-201ENST00000361198 DYNC1I2Q13409 638 aaKnown RBP22.41■■□□□ 1.18
LDB1-201ENST00000361198 RETSATQ6NUM9 610 aa22.41■■□□□ 1.18
LDB1-201ENST00000361198 OTOP2Q7RTS6 562 aa22.41■■□□□ 1.18
LDB1-201ENST00000361198 AHI1Q8N157 1196 aa22.41■■□□□ 1.18
LDB1-201ENST00000361198 FBXO39Q8N4B4 442 aa22.41■■□□□ 1.18
LDB1-201ENST00000361198 CD200R1Q8TD46 325 aa22.41■■□□□ 1.18
LDB1-201ENST00000361198 FBRSL1Q9HCM7 1045 aaKnown RBP22.41■■□□□ 1.18
LDB1-201ENST00000361198 VCX3AQ9NNX9 186 aa22.41■■□□□ 1.18
LDB1-201ENST00000361198 CACNA2D2Q9NY47 1150 aa22.41■■□□□ 1.18
LDB1-201ENST00000361198 SH3BP1Q9Y3L3 701 aa22.41■■□□□ 1.18
LDB1-201ENST00000361198 A0A1W2PRU2 124 aa22.41■■□□□ 1.18
LDB1-201ENST00000361198 BTN3A1O00481 513 aa22.41■■□□□ 1.18
LDB1-201ENST00000361198 LRG1P02750 347 aa22.41■■□□□ 1.18
LDB1-201ENST00000361198 C8BP07358 591 aa22.41■■□□□ 1.18
LDB1-201ENST00000361198 FGF4P08620 206 aa22.41■■□□□ 1.18
LDB1-201ENST00000361198 CTSAP10619 480 aa22.41■■□□□ 1.18
LDB1-201ENST00000361198 EEF1DP29692 281 aaKnown RBP22.41■■□□□ 1.18
LDB1-201ENST00000361198 CREB5Q02930 508 aa22.41■■□□□ 1.18
LDB1-201ENST00000361198 SPATA24Q86W54 205 aa22.41■■□□□ 1.18
LDB1-201ENST00000361198 PAWRQ96IZ0 340 aaKnown RBP22.41■■□□□ 1.18
LDB1-201ENST00000361198 CCDC167Q9P0B6 97 aa22.41■■□□□ 1.18
LDB1-201ENST00000361198 TRMT6Q9UJA5 497 aaKnown RBP22.41■■□□□ 1.18
LDB1-201ENST00000361198 PTGDR2Q9Y5Y4 395 aa22.41■■□□□ 1.18
LDB1-201ENST00000361198 A0A1B0GTL3 188 aa22.4■■□□□ 1.18
LDB1-201ENST00000361198 IQCF5A8MTL0 148 aa22.4■■□□□ 1.18
LDB1-201ENST00000361198 FBP2O00757 339 aa22.4■■□□□ 1.18
LDB1-201ENST00000361198 CLGNO14967 610 aa22.4■■□□□ 1.18
LDB1-201ENST00000361198 TRIM24O15164 1050 aa22.4■■□□□ 1.18
LDB1-201ENST00000361198 RNASEH2AO75792 299 aaKnown RBP22.4■■□□□ 1.18
LDB1-201ENST00000361198 TFAP2AP05549 437 aa22.4■■□□□ 1.18
LDB1-201ENST00000361198 CHRM3P20309 590 aa22.4■■□□□ 1.18
LDB1-201ENST00000361198 RPL5P46777 297 aaKnown RBP22.4■■□□□ 1.18
LDB1-201ENST00000361198 SLC7A9P82251 487 aa22.4■■□□□ 1.18
LDB1-201ENST00000361198 LMAN2Q12907 356 aa22.4■■□□□ 1.18
LDB1-201ENST00000361198 LSAMPQ13449 338 aa22.4■■□□□ 1.18
LDB1-201ENST00000361198 GEN1Q17RS7 908 aa22.4■■□□□ 1.18
LDB1-201ENST00000361198 AARS2Q5JTZ9 985 aaKnown RBP22.4■■□□□ 1.18
LDB1-201ENST00000361198 AP1ARQ63HQ0 302 aa22.4■■□□□ 1.18
LDB1-201ENST00000361198 SNX31Q8N9S9 440 aa22.4■■□□□ 1.18
LDB1-201ENST00000361198 EEF1AKMT1Q8WVE0 214 aa22.4■■□□□ 1.18
LDB1-201ENST00000361198 ACDQ96AP0 544 aa22.4■■□□□ 1.18
LDB1-201ENST00000361198 KCNA7Q96RP8 456 aa22.4■■□□□ 1.18
LDB1-201ENST00000361198 ZNF696Q9H7X3 374 aa22.4■■□□□ 1.18
LDB1-201ENST00000361198 ADA2Q9NZK5 511 aa22.4■■□□□ 1.18
LDB1-201ENST00000361198 PTPRSQ13332 1948 aa22.4■■□□□ 1.18
LDB1-201ENST00000361198 NCF1BA6NI72 391 aaPredicted RBP22.4■■□□□ 1.18
LDB1-201ENST00000361198 NCF1CA8MVU1 366 aaPredicted RBP22.4■■□□□ 1.18
LDB1-201ENST00000361198 E7ENX8 843 aa22.4■■□□□ 1.18
LDB1-201ENST00000361198 PSMD12O00232 456 aaPredicted RBP22.4■■□□□ 1.18
LDB1-201ENST00000361198 AZIN1O14977 448 aa22.4■■□□□ 1.18
LDB1-201ENST00000361198 NCF1P14598 390 aaPredicted RBP22.4■■□□□ 1.18
LDB1-201ENST00000361198 PTGER3P43115 390 aa22.4■■□□□ 1.18
LDB1-201ENST00000361198 FASTKQ14296 549 aaKnown RBP22.4■■□□□ 1.18
LDB1-201ENST00000361198 GPR65Q8IYL9 337 aa22.4■■□□□ 1.18
LDB1-201ENST00000361198 FAM156AQ8NDB6 213 aa22.4■■□□□ 1.18
LDB1-201ENST00000361198 KCNJ9Q92806 393 aa22.4■■□□□ 1.18
LDB1-201ENST00000361198 BEGAINQ9BUH8 593 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms