RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 PPIBP23284 216 aaKnown RBP13.86□□□□□ -0.19
SMC5-201ENST00000361138 GNPDA1P46926 289 aa13.86□□□□□ -0.19
SMC5-201ENST00000361138 TMBIM6P55061 237 aa13.86□□□□□ -0.19
SMC5-201ENST00000361138 ZNF280DQ6N043 979 aa13.86□□□□□ -0.19
SMC5-201ENST00000361138 NALCNQ8IZF0 1738 aa13.86□□□□□ -0.19
SMC5-201ENST00000361138 SLC39A3Q9BRY0 314 aa13.86□□□□□ -0.19
SMC5-201ENST00000361138 CNPPD1Q9BV87 410 aa13.86□□□□□ -0.19
SMC5-201ENST00000361138 ASB8Q9H765 288 aa13.86□□□□□ -0.19
SMC5-201ENST00000361138 AASDHPPTQ9NRN7 309 aa13.86□□□□□ -0.19
SMC5-201ENST00000361138 A0A1W2PQ72 361 aa13.86□□□□□ -0.19
SMC5-201ENST00000361138 FAM234BA2RU67 622 aa13.86□□□□□ -0.19
SMC5-201ENST00000361138 CASKO14936 926 aa13.86□□□□□ -0.19
SMC5-201ENST00000361138 PAGE1O75459 146 aa13.86□□□□□ -0.19
SMC5-201ENST00000361138 CYP11A1P05108 521 aa13.86□□□□□ -0.19
SMC5-201ENST00000361138 SMIM11AP58511 58 aa13.86□□□□□ -0.19
SMC5-201ENST00000361138 NPTX1Q15818 432 aa13.86□□□□□ -0.19
SMC5-201ENST00000361138 BRMS1LQ5PSV4 323 aa13.86□□□□□ -0.19
SMC5-201ENST00000361138 DDI2Q5TDH0 399 aa13.86□□□□□ -0.19
SMC5-201ENST00000361138 NCBP2-AS2Q69YL0 99 aa13.86□□□□□ -0.19
SMC5-201ENST00000361138 TMBIM1Q969X1 311 aa13.86□□□□□ -0.19
SMC5-201ENST00000361138 NUSAP1Q9BXS6 441 aaKnown RBP13.86□□□□□ -0.19
SMC5-201ENST00000361138 TRPV5Q9NQA5 729 aa13.86□□□□□ -0.19
SMC5-201ENST00000361138 MAFBQ9Y5Q3 323 aaPredicted RBP13.86□□□□□ -0.19
SMC5-201ENST00000361138 NR2E3Q9Y5X4 410 aa13.86□□□□□ -0.19
SMC5-201ENST00000361138 PHLPP1O60346 1717 aa13.85□□□□□ -0.19
SMC5-201ENST00000361138 RGPD1P0DJD0 1748 aa13.85□□□□□ -0.19
SMC5-201ENST00000361138 FAM240BA0A1B0GVZ2 78 aa13.85□□□□□ -0.19
SMC5-201ENST00000361138 F7P08709 466 aaPredicted RBP13.85□□□□□ -0.19
SMC5-201ENST00000361138 IMPDH1P20839 514 aa13.85□□□□□ -0.19
SMC5-201ENST00000361138 ATP12AP54707 1039 aa13.85□□□□□ -0.19
SMC5-201ENST00000361138 PTPN5P54829 565 aa13.85□□□□□ -0.19
SMC5-201ENST00000361138 BCL2L1Q07817 233 aa13.85□□□□□ -0.19
SMC5-201ENST00000361138 FOXM1Q08050 763 aa13.85□□□□□ -0.19
SMC5-201ENST00000361138 UTP4Q969X6 686 aaKnown RBP13.85□□□□□ -0.19
SMC5-201ENST00000361138 ABCB7O75027 752 aa13.85□□□□□ -0.19
SMC5-201ENST00000361138 LPOP22079 712 aaPredicted RBP13.85□□□□□ -0.19
SMC5-201ENST00000361138 ATXN1P54253 815 aaKnown RBP13.85□□□□□ -0.19
SMC5-201ENST00000361138 HERVK_113P63132 956 aa13.85□□□□□ -0.19
SMC5-201ENST00000361138 MFSD10Q14728 455 aa13.85□□□□□ -0.19
SMC5-201ENST00000361138 PABPC1LQ4VXU2 614 aaKnown RBP13.85□□□□□ -0.19
SMC5-201ENST00000361138 TMEM53Q6P2H8 277 aa13.85□□□□□ -0.19
SMC5-201ENST00000361138 TMPRSS11AQ6ZMR5 421 aa13.85□□□□□ -0.19
SMC5-201ENST00000361138 C16orf59Q7L2K0 433 aa13.85□□□□□ -0.19
SMC5-201ENST00000361138 DET1Q7L5Y6 550 aa13.85□□□□□ -0.19
SMC5-201ENST00000361138 OR8H1Q8NGG4 311 aa13.85□□□□□ -0.19
SMC5-201ENST00000361138 COPS5Q92905 334 aa13.85□□□□□ -0.19
SMC5-201ENST00000361138 ERVK-6Q9BXR3 956 aa13.85□□□□□ -0.19
SMC5-201ENST00000361138 NLNQ9BYT8 704 aa13.85□□□□□ -0.19
SMC5-201ENST00000361138 AGO3Q9H9G7 860 aaKnown RBP13.85□□□□□ -0.19
SMC5-201ENST00000361138 RPS6KB2Q9UBS0 482 aa13.85□□□□□ -0.19
SMC5-201ENST00000361138 TNFRSF11BO00300 401 aa13.85□□□□□ -0.19
SMC5-201ENST00000361138 CPSF6Q16630 551 aaKnown RBP eCLIP13.85□□□□□ -0.19
SMC5-201ENST00000361138 FAM35AQ86V20 835 aa13.85□□□□□ -0.19
SMC5-201ENST00000361138 RIOX2Q8IUF8 465 aa13.85□□□□□ -0.19
SMC5-201ENST00000361138 KLHL5Q96PQ7 755 aa13.85□□□□□ -0.19
SMC5-201ENST00000361138 FAIMQ9NVQ4 179 aa13.85□□□□□ -0.19
SMC5-201ENST00000361138 MKS1Q9NXB0 559 aa13.85□□□□□ -0.19
SMC5-201ENST00000361138 ACTR3BQ9P1U1 418 aa13.85□□□□□ -0.19
SMC5-201ENST00000361138 PTCH2Q9Y6C5 1203 aa13.85□□□□□ -0.19
SMC5-201ENST00000361138 ATRNL1Q5VV63 1379 aa13.85□□□□□ -0.19
SMC5-201ENST00000361138 IL1BP01584 269 aa13.85□□□□□ -0.19
SMC5-201ENST00000361138 PTPRAP18433 802 aa13.85□□□□□ -0.19
SMC5-201ENST00000361138 NOS3P29474 1203 aa13.85□□□□□ -0.19
SMC5-201ENST00000361138 TMEM132BQ14DG7 1078 aa13.85□□□□□ -0.19
SMC5-201ENST00000361138 PTF1AQ7RTS3 328 aa13.85□□□□□ -0.19
SMC5-201ENST00000361138 KRT78Q8N1N4 520 aa13.85□□□□□ -0.19
SMC5-201ENST00000361138 C10orf53Q8N6V4 93 aa13.85□□□□□ -0.19
SMC5-201ENST00000361138 FCRL2Q96LA5 508 aaPredicted RBP13.85□□□□□ -0.19
SMC5-201ENST00000361138 XPNPEP1Q9NQW7 623 aa13.85□□□□□ -0.19
SMC5-201ENST00000361138 NUDT4Q9NZJ9 180 aa13.85□□□□□ -0.19
SMC5-201ENST00000361138 PCDHGA10Q9Y5H3 936 aa13.85□□□□□ -0.19
SMC5-201ENST00000361138 IRGMA1A4Y4 181 aa13.84□□□□□ -0.19
SMC5-201ENST00000361138 FPGTO14772 594 aa13.84□□□□□ -0.19
SMC5-201ENST00000361138 TAS2R39P59534 338 aa13.84□□□□□ -0.19
SMC5-201ENST00000361138 RFTN1Q14699 578 aaPredicted RBP13.84□□□□□ -0.19
SMC5-201ENST00000361138 GNASQ5JWF2 1037 aa13.84□□□□□ -0.19
SMC5-201ENST00000361138 FAM182AQ5T1J6 154 aa13.84□□□□□ -0.19
SMC5-201ENST00000361138 KLHL35Q6PF15 583 aa13.84□□□□□ -0.19
SMC5-201ENST00000361138 KRT74Q7RTS7 529 aa13.84□□□□□ -0.19
SMC5-201ENST00000361138 TUBA1CQ9BQE3 449 aa13.84□□□□□ -0.19
SMC5-201ENST00000361138 AKTIPQ9H8T0 292 aa13.84□□□□□ -0.19
SMC5-201ENST00000361138 ABCB9Q9NP78 766 aa13.84□□□□□ -0.19
SMC5-201ENST00000361138 ZNF224Q9NZL3 707 aa13.84□□□□□ -0.19
SMC5-201ENST00000361138 EBF1Q9UH73 591 aa13.84□□□□□ -0.19
SMC5-201ENST00000361138 MAGEB3O15480 346 aa13.84□□□□□ -0.19
SMC5-201ENST00000361138 PSMA1P25786 263 aaKnown RBP13.84□□□□□ -0.19
SMC5-201ENST00000361138 MYBPC3Q14896 1274 aa13.84□□□□□ -0.19
SMC5-201ENST00000361138 TSTD2Q5T7W7 516 aa13.84□□□□□ -0.19
SMC5-201ENST00000361138 CNSTQ6PJW8 725 aa13.84□□□□□ -0.19
SMC5-201ENST00000361138 STON2Q8WXE9 905 aa13.84□□□□□ -0.19
SMC5-201ENST00000361138 FBXL18Q96ME1 805 aa13.84□□□□□ -0.19
SMC5-201ENST00000361138 SLITRK2Q9H156 845 aa13.84□□□□□ -0.19
SMC5-201ENST00000361138 DPEP3Q9H4B8 488 aa13.84□□□□□ -0.19
SMC5-201ENST00000361138 DHFRP00374 187 aa13.84□□□□□ -0.19
SMC5-201ENST00000361138 ENO2P09104 434 aaPredicted RBP13.84□□□□□ -0.19
SMC5-201ENST00000361138 ARF4P18085 180 aaPredicted RBP13.84□□□□□ -0.19
SMC5-201ENST00000361138 IVDP26440 423 aa13.84□□□□□ -0.19
SMC5-201ENST00000361138 C9orf131Q5VYM1 1079 aa13.84□□□□□ -0.19
SMC5-201ENST00000361138 ZDHHC21Q8IVQ6 265 aa13.84□□□□□ -0.19
SMC5-201ENST00000361138 IZUMO1Q8IYV9 350 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms