RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 OR2T3Q8NH03 318 aa11.1□□□□□ -0.63
SSU72-202ENST00000359060 FBXO30Q8TB52 745 aa11.1□□□□□ -0.63
SSU72-202ENST00000359060 ASB9Q96DX5 294 aa11.1□□□□□ -0.63
SSU72-202ENST00000359060 ERLEC1Q96DZ1 483 aa11.1□□□□□ -0.63
SSU72-202ENST00000359060 MPP4Q96JB8 637 aa11.1□□□□□ -0.63
SSU72-202ENST00000359060 BTBD9Q96Q07 612 aa11.1□□□□□ -0.63
SSU72-202ENST00000359060 ATP13A3Q9H7F0 1226 aa11.1□□□□□ -0.63
SSU72-202ENST00000359060 IPPKQ9H8X2 491 aa11.1□□□□□ -0.63
SSU72-202ENST00000359060 NDUFA13Q9P0J0 144 aa11.1□□□□□ -0.63
SSU72-202ENST00000359060 LIMD1Q9UGP4 676 aa11.1□□□□□ -0.63
SSU72-202ENST00000359060 C2orf78A6NCI8 922 aa11.09□□□□□ -0.63
SSU72-202ENST00000359060 KERAO60938 352 aa11.09□□□□□ -0.63
SSU72-202ENST00000359060 BCAS2O75934 225 aaPredicted RBP11.09□□□□□ -0.63
SSU72-202ENST00000359060 PBLDP30039 288 aaPredicted RBP11.09□□□□□ -0.63
SSU72-202ENST00000359060 RGRP47804 291 aa11.09□□□□□ -0.63
SSU72-202ENST00000359060 CYP4F8P98187 520 aa11.09□□□□□ -0.63
SSU72-202ENST00000359060 AP5B1Q2VPB7 878 aa11.09□□□□□ -0.63
SSU72-202ENST00000359060 ZIK1Q3SY52 487 aaPredicted RBP11.09□□□□□ -0.63
SSU72-202ENST00000359060 PSAPL1Q6NUJ1 521 aa11.09□□□□□ -0.63
SSU72-202ENST00000359060 RBM44Q6ZP01 1051 aaKnown RBP11.09□□□□□ -0.63
SSU72-202ENST00000359060 SATL1Q86VE3 508 aa11.09□□□□□ -0.63
SSU72-202ENST00000359060 ABTB1Q969K4 478 aaPredicted RBP11.09□□□□□ -0.63
SSU72-202ENST00000359060 ISL2Q96A47 359 aa11.09□□□□□ -0.63
SSU72-202ENST00000359060 HOPXQ9BPY8 73 aaPredicted RBP11.09□□□□□ -0.63
SSU72-202ENST00000359060 PIDD1Q9HB75 910 aa11.09□□□□□ -0.63
SSU72-202ENST00000359060 ANAPC2Q9UJX6 822 aa11.09□□□□□ -0.63
SSU72-202ENST00000359060 MYRFQ9Y2G1 1151 aa11.09□□□□□ -0.63
SSU72-202ENST00000359060 SQORQ9Y6N5 450 aa11.09□□□□□ -0.63
SSU72-202ENST00000359060 RGPD3A6NKT7 1758 aaPredicted RBP11.09□□□□□ -0.63
SSU72-202ENST00000359060 RGPD4Q7Z3J3 1758 aa11.09□□□□□ -0.63
SSU72-202ENST00000359060 MYOCOSA0A1B0GUC4 107 aa11.09□□□□□ -0.63
SSU72-202ENST00000359060 ULK1O75385 1050 aa11.09□□□□□ -0.63
SSU72-202ENST00000359060 RPL5P46777 297 aaKnown RBP11.09□□□□□ -0.63
SSU72-202ENST00000359060 DSC1Q08554 894 aa11.09□□□□□ -0.63
SSU72-202ENST00000359060 GTF2H3Q13889 308 aa11.09□□□□□ -0.63
SSU72-202ENST00000359060 PTPRRQ15256 657 aa11.09□□□□□ -0.63
SSU72-202ENST00000359060 FAM47BQ8NA70 645 aa11.09□□□□□ -0.63
SSU72-202ENST00000359060 ARNT2Q9HBZ2 717 aa11.09□□□□□ -0.63
SSU72-202ENST00000359060 GNPTGQ9UJJ9 305 aa11.09□□□□□ -0.63
SSU72-202ENST00000359060 DNAJC15Q9Y5T4 150 aa11.09□□□□□ -0.63
SSU72-202ENST00000359060 CCDC189A1A4V9 331 aa11.09□□□□□ -0.63
SSU72-202ENST00000359060 MYO1GB0I1T2 1018 aa11.09□□□□□ -0.63
SSU72-202ENST00000359060 ZNF195O14628 629 aa11.09□□□□□ -0.63
SSU72-202ENST00000359060 GPR39O43194 453 aa11.09□□□□□ -0.63
SSU72-202ENST00000359060 IGLV3-25P01717 112 aa11.09□□□□□ -0.63
SSU72-202ENST00000359060 KRT6AP02538 564 aa11.09□□□□□ -0.63
SSU72-202ENST00000359060 KRT6BP04259 564 aa11.09□□□□□ -0.63
SSU72-202ENST00000359060 MTHFD1P11586 935 aaKnown RBP11.09□□□□□ -0.63
SSU72-202ENST00000359060 SLC6A4P31645 630 aa11.09□□□□□ -0.63
SSU72-202ENST00000359060 KRT6CP48668 564 aa11.09□□□□□ -0.63
SSU72-202ENST00000359060 POLR2JP52435 117 aaKnown RBP11.09□□□□□ -0.63
SSU72-202ENST00000359060 CREB5Q02930 508 aa11.09□□□□□ -0.63
SSU72-202ENST00000359060 SLC5A9Q2M3M2 681 aa11.09□□□□□ -0.63
SSU72-202ENST00000359060 KBTBD6Q86V97 674 aa11.09□□□□□ -0.63
SSU72-202ENST00000359060 RBFAQ8N0V3 343 aa11.09□□□□□ -0.63
SSU72-202ENST00000359060 KIAA1191Q96A73 305 aa11.09□□□□□ -0.63
SSU72-202ENST00000359060 PLD4Q96BZ4 506 aa11.09□□□□□ -0.63
SSU72-202ENST00000359060 CRISPLD1Q9H336 500 aa11.09□□□□□ -0.63
SSU72-202ENST00000359060 PLXNB2O15031 1838 aa11.09□□□□□ -0.63
SSU72-202ENST00000359060 ZNF840PA6NDX5 716 aa11.09□□□□□ -0.63
SSU72-202ENST00000359060 KDELR3O43731 214 aa11.09□□□□□ -0.63
SSU72-202ENST00000359060 GGT5P36269 586 aa11.09□□□□□ -0.63
SSU72-202ENST00000359060 KCNC1P48547 511 aa11.09□□□□□ -0.63
SSU72-202ENST00000359060 LIPEQ05469 1076 aa11.09□□□□□ -0.63
SSU72-202ENST00000359060 ZNF423Q2M1K9 1284 aa11.09□□□□□ -0.63
SSU72-202ENST00000359060 PIGGQ5H8A4 983 aa11.09□□□□□ -0.63
SSU72-202ENST00000359060 MANEALQ5VSG8 457 aa11.09□□□□□ -0.63
SSU72-202ENST00000359060 BNIPLQ7Z465 357 aa11.09□□□□□ -0.63
SSU72-202ENST00000359060 TMCO2Q7Z6W1 182 aaPredicted RBP11.09□□□□□ -0.63
SSU72-202ENST00000359060 TMEM173Q86WV6 379 aaPredicted RBP11.09□□□□□ -0.63
SSU72-202ENST00000359060 CBR4Q8N4T8 237 aa11.09□□□□□ -0.63
SSU72-202ENST00000359060 TSPAN14Q8NG11 270 aa11.09□□□□□ -0.63
SSU72-202ENST00000359060 GFM2Q969S9 779 aaKnown RBP11.09□□□□□ -0.63
SSU72-202ENST00000359060 RANBP9Q96S59 729 aa11.09□□□□□ -0.63
SSU72-202ENST00000359060 SPATA16Q9BXB7 569 aa11.09□□□□□ -0.63
SSU72-202ENST00000359060 GSTO2Q9H4Y5 243 aa11.09□□□□□ -0.63
SSU72-202ENST00000359060 SLC25A13Q9UJS0 675 aa11.09□□□□□ -0.63
SSU72-202ENST00000359060 LCHNA4D1U4 455 aa11.08□□□□□ -0.64
SSU72-202ENST00000359060 BBIP1A8MTZ0 92 aa11.08□□□□□ -0.64
SSU72-202ENST00000359060 PFDN1O60925 122 aa11.08□□□□□ -0.64
SSU72-202ENST00000359060 RNASEH2AO75792 299 aaKnown RBP11.08□□□□□ -0.64
SSU72-202ENST00000359060 STC2O76061 302 aa11.08□□□□□ -0.64
SSU72-202ENST00000359060 FKBP9O95302 570 aa11.08□□□□□ -0.64
SSU72-202ENST00000359060 OTCP00480 354 aa11.08□□□□□ -0.64
SSU72-202ENST00000359060 UROSP10746 265 aa11.08□□□□□ -0.64
SSU72-202ENST00000359060 EPB42P16452 691 aa11.08□□□□□ -0.64
SSU72-202ENST00000359060 PTGER3P43115 390 aa11.08□□□□□ -0.64
SSU72-202ENST00000359060 FOXA1P55317 472 aa11.08□□□□□ -0.64
SSU72-202ENST00000359060 CACNG1Q06432 222 aa11.08□□□□□ -0.64
SSU72-202ENST00000359060 TMED1Q13445 227 aa11.08□□□□□ -0.64
SSU72-202ENST00000359060 FAM219BQ5XKK7 198 aa11.08□□□□□ -0.64
SSU72-202ENST00000359060 PGM2L1Q6PCE3 622 aa11.08□□□□□ -0.64
SSU72-202ENST00000359060 FKBP9P1Q75LS8 142 aa11.08□□□□□ -0.64
SSU72-202ENST00000359060 ITFG1Q8TB96 612 aa11.08□□□□□ -0.64
SSU72-202ENST00000359060 SELENOMQ8WWX9 145 aa11.08□□□□□ -0.64
SSU72-202ENST00000359060 SLC45A3Q96JT2 553 aa11.08□□□□□ -0.64
SSU72-202ENST00000359060 WASH4PA8MWX3 477 aa11.08□□□□□ -0.64
SSU72-202ENST00000359060 PDLIM1O00151 329 aa11.08□□□□□ -0.64
SSU72-202ENST00000359060 RGS14O43566 566 aa11.08□□□□□ -0.64
SSU72-202ENST00000359060 ESR1P03372 595 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms