RNA–Protein interactions for RNA: ENST00000358763.6

SYN3-202, Transcript of synapsin III, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYN3, Length 3,126 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-202ENST00000358763 PLXNB3Q9ULL4 1909 aa11.86□□□□□ -0.51
SYN3-202ENST00000358763 ARNTLO00327 626 aa11.86□□□□□ -0.51
SYN3-202ENST00000358763 MTX2O75431 263 aa11.86□□□□□ -0.51
SYN3-202ENST00000358763 TSPAN12O95859 305 aa11.86□□□□□ -0.51
SYN3-202ENST00000358763 HNRNPLP14866 589 aaKnown RBP eCLIP11.86□□□□□ -0.514e-7■■■■□ 20.1
SYN3-202ENST00000358763 ZNF30P17039 623 aa11.86□□□□□ -0.51
SYN3-202ENST00000358763 MMP12P39900 470 aa11.86□□□□□ -0.51
SYN3-202ENST00000358763 SCTRP47872 440 aa11.86□□□□□ -0.51
SYN3-202ENST00000358763 ELAVL3Q14576 367 aaKnown RBP11.86□□□□□ -0.51
SYN3-202ENST00000358763 FBXO48Q5FWF7 155 aa11.86□□□□□ -0.51
SYN3-202ENST00000358763 FAM219BQ5XKK7 198 aa11.86□□□□□ -0.51
SYN3-202ENST00000358763 MMAAQ8IVH4 418 aaKnown RBP11.86□□□□□ -0.51
SYN3-202ENST00000358763 LSMEM2Q8N112 164 aa11.86□□□□□ -0.51
SYN3-202ENST00000358763 PLEKHG4BQ96PX9 1271 aa11.86□□□□□ -0.51
SYN3-202ENST00000358763 C19orf43Q9BQ61 176 aa11.86□□□□□ -0.51
SYN3-202ENST00000358763 DERL2Q9GZP9 239 aa11.86□□□□□ -0.51
SYN3-202ENST00000358763 DKK3Q9UBP4 350 aa11.86□□□□□ -0.51
SYN3-202ENST00000358763 GNPTGQ9UJJ9 305 aa11.86□□□□□ -0.51
SYN3-202ENST00000358763 ZFP69BQ9UJL9 534 aa11.86□□□□□ -0.51
SYN3-202ENST00000358763 TMPRSS11EQ9UL52 423 aa11.86□□□□□ -0.51
SYN3-202ENST00000358763 PIKFYVEQ9Y2I7 2098 aa11.86□□□□□ -0.51
SYN3-202ENST00000358763 ANKRD12Q6UB98 2062 aa11.85□□□□□ -0.51
SYN3-202ENST00000358763 TICRRQ7Z2Z1 1910 aa11.85□□□□□ -0.51
SYN3-202ENST00000358763 ECI2O75521 394 aa11.85□□□□□ -0.51
SYN3-202ENST00000358763 ELFN1P0C7U0 828 aa11.85□□□□□ -0.51
SYN3-202ENST00000358763 TSPAN8P19075 237 aa11.85□□□□□ -0.51
SYN3-202ENST00000358763 SEC13P55735 322 aa11.85□□□□□ -0.51
SYN3-202ENST00000358763 CORO7P57737 925 aa11.85□□□□□ -0.51
SYN3-202ENST00000358763 LACTB2Q53H82 288 aaPredicted RBP11.85□□□□□ -0.51
SYN3-202ENST00000358763 DPPA4Q7L190 304 aa11.85□□□□□ -0.51
SYN3-202ENST00000358763 DET1Q7L5Y6 550 aa11.85□□□□□ -0.51
SYN3-202ENST00000358763 SMRP1Q8NCR6 262 aa11.85□□□□□ -0.51
SYN3-202ENST00000358763 PPP1R36Q96LQ0 422 aa11.85□□□□□ -0.51
SYN3-202ENST00000358763 RILPQ96NA2 401 aa11.85□□□□□ -0.51
SYN3-202ENST00000358763 ATOH8Q96SQ7 321 aa11.85□□□□□ -0.51
SYN3-202ENST00000358763 FAM129BQ96TA1 746 aa11.85□□□□□ -0.51
SYN3-202ENST00000358763 PPM1HQ9ULR3 514 aa11.85□□□□□ -0.51
SYN3-202ENST00000358763 RNF112Q9ULX5 631 aa11.85□□□□□ -0.51
SYN3-202ENST00000358763 COQ6Q9Y2Z9 468 aa11.85□□□□□ -0.51
SYN3-202ENST00000358763 COMMD10Q9Y6G5 202 aa11.85□□□□□ -0.51
SYN3-202ENST00000358763 LRRC14BA6NHZ5 514 aa11.85□□□□□ -0.51
SYN3-202ENST00000358763 NCF1BA6NI72 391 aaPredicted RBP11.85□□□□□ -0.51
SYN3-202ENST00000358763 NCF1CA8MVU1 366 aaPredicted RBP11.85□□□□□ -0.51
SYN3-202ENST00000358763 SUPT3HB4E1H0 165 aa11.85□□□□□ -0.51
SYN3-202ENST00000358763 SPINT1O43278 529 aa11.85□□□□□ -0.51
SYN3-202ENST00000358763 SUPT3HO75486 399 aa11.85□□□□□ -0.51
SYN3-202ENST00000358763 SLC25A14O95258 325 aaPredicted RBP11.85□□□□□ -0.51
SYN3-202ENST00000358763 APODP05090 189 aa11.85□□□□□ -0.51
SYN3-202ENST00000358763 NCF1P14598 390 aaPredicted RBP11.85□□□□□ -0.51
SYN3-202ENST00000358763 GRIA2P42262 883 aa11.85□□□□□ -0.51
SYN3-202ENST00000358763 PSMD8P48556 350 aa11.85□□□□□ -0.51
SYN3-202ENST00000358763 PRKAA2P54646 552 aa11.85□□□□□ -0.51
SYN3-202ENST00000358763 IL2P60568 153 aa11.85□□□□□ -0.51
SYN3-202ENST00000358763 B4GALNT1Q00973 533 aa11.85□□□□□ -0.51
SYN3-202ENST00000358763 ASPHQ12797 758 aa11.85□□□□□ -0.51
SYN3-202ENST00000358763 GALNTL6Q49A17 601 aa11.85□□□□□ -0.51
SYN3-202ENST00000358763 ERAP2Q6P179 960 aa11.85□□□□□ -0.51
SYN3-202ENST00000358763 FBXL19Q6PCT2 694 aa11.85□□□□□ -0.51
SYN3-202ENST00000358763 NKAPQ8N5F7 415 aaKnown RBP11.85□□□□□ -0.51
SYN3-202ENST00000358763 PTGR2Q8N8N7 351 aaPredicted RBP11.85□□□□□ -0.51
SYN3-202ENST00000358763 SKA1Q96BD8 255 aa11.85□□□□□ -0.51
SYN3-202ENST00000358763 COPS8Q99627 209 aa11.85□□□□□ -0.51
SYN3-202ENST00000358763 WWP1Q9H0M0 922 aa11.85□□□□□ -0.51
SYN3-202ENST00000358763 CDH19Q9H159 772 aa11.85□□□□□ -0.51
SYN3-202ENST00000358763 FAM83DQ9H4H8 585 aa11.85□□□□□ -0.51
SYN3-202ENST00000358763 THAP10Q9P2Z0 257 aaPredicted RBP11.85□□□□□ -0.51
SYN3-202ENST00000358763 MBD1Q9UIS9 605 aaPredicted RBP11.85□□□□□ -0.51
SYN3-202ENST00000358763 AGAP14A8MT82 685 aa11.84□□□□□ -0.51
SYN3-202ENST00000358763 TMEM233B4DJY2 109 aa11.84□□□□□ -0.51
SYN3-202ENST00000358763 F8W8V4 182 aa11.84□□□□□ -0.51
SYN3-202ENST00000358763 SMIM24O75264 130 aa11.84□□□□□ -0.51
SYN3-202ENST00000358763 SIX3O95343 332 aaPredicted RBP11.84□□□□□ -0.51
SYN3-202ENST00000358763 RPS3P23396 243 aaKnown RBP eCLIP11.84□□□□□ -0.51
SYN3-202ENST00000358763 AKT1P31749 480 aa11.84□□□□□ -0.51
SYN3-202ENST00000358763 ACOX1Q15067 660 aa11.84□□□□□ -0.51
SYN3-202ENST00000358763 PFKFB4Q16877 469 aa11.84□□□□□ -0.51
SYN3-202ENST00000358763 AAK1Q2M2I8 961 aa11.84□□□□□ -0.51
SYN3-202ENST00000358763 GPRC6AQ5T6X5 926 aa11.84□□□□□ -0.51
SYN3-202ENST00000358763 LYPLAL1Q5VWZ2 237 aa11.84□□□□□ -0.51
SYN3-202ENST00000358763 LIPIQ6XZB0 460 aa11.84□□□□□ -0.51
SYN3-202ENST00000358763 PIWIL4Q7Z3Z4 852 aaKnown RBP11.84□□□□□ -0.51
SYN3-202ENST00000358763 CLNKQ7Z7G1 428 aa11.84□□□□□ -0.51
SYN3-202ENST00000358763 CHPFQ8IZ52 775 aa11.84□□□□□ -0.51
SYN3-202ENST00000358763 KDM1BQ8NB78 822 aa11.84□□□□□ -0.51
SYN3-202ENST00000358763 KIAA1191Q96A73 305 aa11.84□□□□□ -0.51
SYN3-202ENST00000358763 RIOK2Q9BVS4 552 aaKnown RBP11.84□□□□□ -0.51
SYN3-202ENST00000358763 NMUR2Q9GZQ4 415 aa11.84□□□□□ -0.51
SYN3-202ENST00000358763 ILKAPQ9H0C8 392 aaPredicted RBP11.84□□□□□ -0.51
SYN3-202ENST00000358763 TFB2MQ9H5Q4 396 aaKnown RBP11.84□□□□□ -0.51
SYN3-202ENST00000358763 PRSS16Q9NQE7 514 aa11.84□□□□□ -0.51
SYN3-202ENST00000358763 ZDHHC3Q9NYG2 299 aa11.84□□□□□ -0.51
SYN3-202ENST00000358763 LMCD1Q9NZU5 365 aa11.84□□□□□ -0.51
SYN3-202ENST00000358763 ZDHHC2Q9UIJ5 367 aa11.84□□□□□ -0.51
SYN3-202ENST00000358763 SLC12A4Q9UP95 1085 aa11.84□□□□□ -0.51
SYN3-202ENST00000358763 FIS1Q9Y3D6 152 aa11.84□□□□□ -0.51
SYN3-202ENST00000358763 DIAPH2O60879 1101 aa11.84□□□□□ -0.51
SYN3-202ENST00000358763 MTHFD2P13995 350 aa11.84□□□□□ -0.51
SYN3-202ENST00000358763 GFAPP14136 432 aa11.84□□□□□ -0.51
SYN3-202ENST00000358763 NFKBIAP25963 317 aa11.84□□□□□ -0.51
SYN3-202ENST00000358763 ITGB7P26010 798 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms