RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 NR2E3Q9Y5X4 410 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 COL5A2P05997 1499 aaPredicted RBP6.53□□□□□ -1.36
VPS13B-202ENST00000357162 S100A2P29034 98 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 POLR2JP52435 117 aaKnown RBP6.53□□□□□ -1.36
VPS13B-202ENST00000357162 ARL6IP1Q15041 203 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 KIAA0930Q6ICG6 404 aaPredicted RBP6.53□□□□□ -1.36
VPS13B-202ENST00000357162 TAPT1Q6NXT6 567 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 C16orf46Q6P387 395 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 AMIGO2Q86SJ2 522 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 SEPT12Q8IYM1 358 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 PHF12Q96QT6 1004 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 PHB2Q99623 299 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 SEPT5Q99719 369 aaPredicted RBP6.53□□□□□ -1.36
VPS13B-202ENST00000357162 FAM86C1Q9NVL1 165 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 RBM22Q9NW64 420 aaKnown RBP eCLIP6.53□□□□□ -1.36
VPS13B-202ENST00000357162 ARL6IP5O75915 188 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 IFNA6P05013 189 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 NRIP1P48552 1158 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 SCNN1GP51170 649 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 RHDQ02161 417 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 DAG1Q14118 895 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 ASTE1Q2TB18 679 aaPredicted RBP6.53□□□□□ -1.36
VPS13B-202ENST00000357162 GCNT7Q6ZNI0 430 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 HID1Q8IV36 788 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 ANKRD49Q8WVL7 239 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 EXOC2Q96KP1 924 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 HNRNPABQ99729 332 aaKnown RBP6.53□□□□□ -1.36
VPS13B-202ENST00000357162 TRIM36Q9NQ86 728 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 MTRRQ9UBK8 725 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 NUFIP1Q9UHK0 495 aaKnown RBP6.53□□□□□ -1.36
VPS13B-202ENST00000357162 RAB19A4D1S5 217 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 STK16O75716 305 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 IL1R1P14778 569 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 OR2B6P58173 313 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 SLC25A3Q00325 362 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 LRRN1Q6UXK5 716 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 LRRN4CLQ8ND94 238 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 ASB13Q8WXK3 278 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 RCN3Q96D15 328 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 USP29Q9HBJ7 922 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 AGO4Q9HCK5 861 aaKnown RBP6.53□□□□□ -1.36
VPS13B-202ENST00000357162 KLHL1Q9NR64 748 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 ABCC13Q9NSE7 274 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 CNTN6Q9UQ52 1028 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 PHRF1Q9P1Y6 1649 aaKnown RBP6.53□□□□□ -1.36
VPS13B-202ENST00000357162 RIC1Q4ADV7 1423 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 TEX51A0A1B0GUA7 166 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 TCRBV5S4A2TA0A5A2 114 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 PEX11AO75192 247 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 TPTEP56180 551 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 GCNT6Q5T4J0 391 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 IL31Q6EBC2 164 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 SLC25A25Q6KCM7 469 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 SELENOMQ8WWX9 145 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 ZNF514Q96K75 400 aaPredicted RBP6.53□□□□□ -1.36
VPS13B-202ENST00000357162 PLCL2Q9UPR0 1127 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 CNTNAP2Q9UHC6 1331 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 IGSF6O95976 241 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 HIST1H2ABP04908 130 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 NPR2P20594 1047 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 MAPK10P53779 464 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 AQP4P55087 323 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 FGL1Q08830 312 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 POU6F1Q14863 301 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 TAF5Q15542 800 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 KLHDC10Q6PID8 442 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 HIST3H2AQ7L7L0 130 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 MRPS31Q92665 395 aaKnown RBP6.53□□□□□ -1.36
VPS13B-202ENST00000357162 HIST1H2ACQ93077 130 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 C11orf24Q96F05 449 aaPredicted RBP6.53□□□□□ -1.36
VPS13B-202ENST00000357162 SEZ6LQ9BYH1 1024 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 ZNF222Q9UK12 451 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 PRAF2O60831 178 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 EPOP01588 193 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 ZNF33BQ06732 778 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 RNF220Q5VTB9 566 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 KANK2Q63ZY3 851 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 TMEM199Q8N511 208 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 ZNF248Q8NDW4 579 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 DDX17Q92841 729 aaKnown RBP6.53□□□□□ -1.36
VPS13B-202ENST00000357162 TSPAN16Q9UKR8 245 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 DIP2CQ9Y2E4 1556 aa6.52□□□□□ -1.36
VPS13B-202ENST00000357162 KANTRA0A1W2PQU2 76 aa6.52□□□□□ -1.36
VPS13B-202ENST00000357162 TSC22D2O75157 780 aa6.52□□□□□ -1.36
VPS13B-202ENST00000357162 CCNCP24863 283 aa6.52□□□□□ -1.36
VPS13B-202ENST00000357162 GTF2E2P29084 291 aaKnown RBP6.52□□□□□ -1.36
VPS13B-202ENST00000357162 YBEYP58557 167 aaPredicted RBP6.52□□□□□ -1.36
VPS13B-202ENST00000357162 HERVK_113P63132 956 aa6.52□□□□□ -1.36
VPS13B-202ENST00000357162 ERVK-8P63133 956 aa6.52□□□□□ -1.36
VPS13B-202ENST00000357162 POU4F2Q12837 409 aa6.52□□□□□ -1.36
VPS13B-202ENST00000357162 PLPPR4Q7Z2D5 763 aa6.52□□□□□ -1.36
VPS13B-202ENST00000357162 CFAP206Q8IYR0 622 aa6.52□□□□□ -1.36
VPS13B-202ENST00000357162 ERVK-6Q9BXR3 956 aa6.52□□□□□ -1.36
VPS13B-202ENST00000357162 IDI2Q9BXS1 227 aa6.52□□□□□ -1.36
VPS13B-202ENST00000357162 RP2O75695 350 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 SERPINA4P29622 427 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 ADIGQ0VDE8 80 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 FGD3Q5JSP0 725 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 ATXN7L2Q5T6C5 722 aaPredicted RBP6.52□□□□□ -1.37
VPS13B-202ENST00000357162 TSPAN33Q86UF1 283 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms