RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 ITIH5Q86UX2 942 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 ZDHHC21Q8IVQ6 265 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 SLCO2A1Q92959 643 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 GLOD4Q9HC38 313 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 KANSL3Q9P2N6 904 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 J3QRK9 145 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 KLF11O14901 512 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 IFNW1P05000 195 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 LINGO3P0C6S8 592 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 CCR4P51679 360 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 GRM3Q14832 879 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 MYBPC3Q14896 1274 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 IL23RQ5VWK5 629 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 RBFAQ8N0V3 343 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 FBXL8Q96CD0 374 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 HSD3B7Q9H2F3 369 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 SLC6A15Q9H2J7 730 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 KCNE2Q9Y6J6 123 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 AP2A1O95782 977 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 SPATA31C1P0DKV0 1188 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 AOC1P19801 751 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 EIF5AP63241 154 aaKnown RBP12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 PABPC1LQ4VXU2 614 aaKnown RBP12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 DCST1Q5T197 706 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 GJD3Q8N144 294 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 C11orf65Q8NCR3 313 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 HEXDCQ8WVB3 486 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 GLT1D1Q96MS3 346 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 EBF4Q9BQW3 602 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 NUSAP1Q9BXS6 441 aaKnown RBP12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 SNTG1Q9NSN8 517 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 CLEC4AQ9UMR7 237 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 PPP2R3BQ9Y5P8 575 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 STK25O00506 426 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 CYP11A1P05108 521 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 BDNFP23560 247 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 GNG2P59768 71 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 DEFA5Q01523 94 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 ZNF423Q2M1K9 1284 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 ADNP2Q6IQ32 1131 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 BEND5Q7L4P6 421 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 HSD17B14Q9BPX1 270 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 MARCH2Q9P0N8 246 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 CNTN6Q9UQ52 1028 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 ZNF432O94892 652 aa12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 CCNB2O95067 398 aa12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 NCK1P16333 377 aa12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 MAGEA2P43356 314 aa12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 CLCN2P51788 898 aa12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 EEFSECP57772 596 aaKnown RBP12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 MYBPC1Q00872 1141 aa12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 CLCQ05315 142 aa12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 SETMARQ53H47 684 aaPredicted RBP12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 ZNF772Q68DY9 489 aaPredicted RBP12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 CLEC6AQ6EIG7 209 aa12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 TSSK3Q96PN8 268 aa12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 CSPG4P5Q96PW8 444 aa12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 SYNDIG1Q9H7V2 258 aa12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 IQCMA0A1B0GVH7 501 aa12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 NPEPPSL1A6NEC2 478 aa12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 AKAP8O43823 692 aaKnown RBP12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 CYP2B6P20813 491 aa12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 CHRNA5P30532 468 aa12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 THOP1P52888 689 aa12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 NPTX1Q15818 432 aa12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 ARSHQ5FYA8 562 aa12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 DAW1Q8N136 415 aa12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 CIPCQ9C0C6 399 aa12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 LDOC1O95751 146 aaPredicted RBP12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 SLC2A2P11168 524 aaPredicted RBP12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 ABL2P42684 1182 aa12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 SLC25A52Q3SY17 297 aa12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 PTPN20Q4JDL3 420 aa12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 HECTD3Q5T447 861 aa12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 FSTL4Q6MZW2 842 aa12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 CYP2U1Q7Z449 544 aa12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 FAM35AQ86V20 835 aa12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 CSGALNACT1Q8TDX6 532 aa12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 LRRN4Q8WUT4 740 aa12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 POF1BQ8WVV4 589 aa12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 BSNDQ8WZ55 320 aa12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 ATF5Q9Y2D1 282 aaPredicted RBP12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 RGS1Q08116 209 aa12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 KLHL22Q53GT1 634 aa12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 UBE2J2Q8N2K1 259 aa12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 FAM98AQ8NCA5 519 aaKnown RBP12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 GLB1L3Q8NCI6 653 aaPredicted RBP12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 PLEKHO2Q8TD55 490 aa12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 PRMT6Q96LA8 375 aaPredicted RBP12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 AAASQ9NRG9 546 aa12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 NUDT4Q9NZJ9 180 aa12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 N6AMT1Q9Y5N5 214 aa12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 KDM4BO94953 1096 aa12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 FGBP02675 491 aa12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 SLC9A3P48764 834 aa12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 TAF1CQ15572 869 aaPredicted RBP12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 TMEM44Q2T9K0 475 aa12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 CRTC2Q53ET0 693 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms