RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 GINS2Q9Y248 185 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 PMF1-BGLAPU3KQ54 211 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 LOC100130705A0A1B0GUX0 176 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 LRRC14BA6NHZ5 514 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 FXYD1O00168 92 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 UBFD1O14562 309 aaKnown RBP7.58□□□□□ -1.2
BRCA1-201ENST00000352993 ALPLP05186 524 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 HTR1AP08908 422 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 CD36P16671 472 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 ARCN1P48444 511 aaKnown RBP7.58□□□□□ -1.2
BRCA1-201ENST00000352993 PAGE3Q5JUK9 113 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 GPR158Q5T848 1215 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 FAM160B1Q5W0V3 765 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 PTGR2Q8N8N7 351 aaPredicted RBP7.58□□□□□ -1.2
BRCA1-201ENST00000352993 FRS2Q8WU20 508 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 FAM151AQ8WW52 585 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 OMA1Q96E52 524 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 DEFB129Q9H1M3 183 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 COMMD8Q9NX08 183 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 ZNF70Q9UC06 446 aaPredicted RBP7.58□□□□□ -1.2
BRCA1-201ENST00000352993 KIAA1257Q9ULG3 409 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 FZD10Q9ULW2 581 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 INVSQ9Y283 1065 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 UBXN8O00124 270 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 AZIN1O14977 448 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 KMOO15229 486 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 FAM20BO75063 409 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 PRKCAP17252 672 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 CYP2B6P20813 491 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 CLCN3P51790 818 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 DNAJB13P59910 316 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 BST2Q10589 180 aaKnown RBP7.58□□□□□ -1.2
BRCA1-201ENST00000352993 IER5Q5VY09 327 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 SULT1C3Q6IMI6 304 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 PKN3Q6P5Z2 889 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 FLAD1Q8NFF5 587 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 GIPC2Q8TF65 315 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 FAM162AQ96A26 154 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 THUMPD3Q9BV44 507 aaKnown RBP7.58□□□□□ -1.2
BRCA1-201ENST00000352993 TRIM54Q9BYV2 358 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 NUAK2Q9H093 628 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 SEMA4BQ9NPR2 832 aaPredicted RBP7.58□□□□□ -1.2
BRCA1-201ENST00000352993 ABCD2Q9UBJ2 740 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 C3orf18Q9UK00 162 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 WBP11Q9Y2W2 641 aaKnown RBP7.58□□□□□ -1.2
BRCA1-201ENST00000352993 TPRKBQ9Y3C4 175 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 DNAJC15Q9Y5T4 150 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 DOCK5Q9H7D0 1870 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 TTC34A8MYJ7 566 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 CCL22O00626 93 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 BCKDKO14874 412 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 ZW10O43264 779 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 GABARAPO95166 117 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 MED26O95402 600 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 PRKACBP22694 351 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 EIF2DP41214 584 aaKnown RBP7.58□□□□□ -1.2
BRCA1-201ENST00000352993 FOXA1P55317 472 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 EPS8Q12929 822 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 GTF2H3Q13889 308 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 MXD4Q14582 209 aaPredicted RBP7.58□□□□□ -1.2
BRCA1-201ENST00000352993 FSCN1Q16658 493 aaKnown RBP7.58□□□□□ -1.2
BRCA1-201ENST00000352993 ATP6AP1LQ52LC2 224 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 TECRLQ5HYJ1 363 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 PCID2Q5JVF3 399 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 IRAK1BP1Q5VVH5 260 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 RBM23Q86U06 439 aaKnown RBP7.58□□□□□ -1.2
BRCA1-201ENST00000352993 PABPC5Q96DU9 382 aaKnown RBP7.58□□□□□ -1.2
BRCA1-201ENST00000352993 AURKBQ96GD4 344 aaPredicted RBP7.58□□□□□ -1.2
BRCA1-201ENST00000352993 PRRG3Q9BZD7 231 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 KAT8Q9H7Z6 458 aaKnown RBP7.58□□□□□ -1.2
BRCA1-201ENST00000352993 NECTIN3Q9NQS3 549 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 RASSF1Q9NS23 344 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 MAP3K20Q9NYL2 800 aaKnown RBP7.58□□□□□ -1.2
BRCA1-201ENST00000352993 BTBD3Q9Y2F9 522 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 CRYL1Q9Y2S2 319 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 SPEF1Q9Y4P9 236 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 CSADQ9Y600 493 aa7.58□□□□□ -1.2
BRCA1-201ENST00000352993 ISPDA4D126 451 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 KRT87PA6NCN2 255 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 SAGE2PA6NJ88 616 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 MYO1GB0I1T2 1018 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 SPATA31C2B4DYI2 1134 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 ACKR2O00590 384 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 NPM3O75607 178 aaKnown RBP7.57□□□□□ -1.2
BRCA1-201ENST00000352993 RECQL5O94762 991 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-201ENST00000352993 CD4P01730 458 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 ANXA6P08133 673 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 RAP2AP10114 183 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 NPR1P16066 1061 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 ZNF37AP17032 561 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-201ENST00000352993 NOS2P35228 1153 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 GRK3P35626 688 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 ACADSBP45954 432 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 UFM1P61960 85 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 SH3BP2P78314 561 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 ITKQ08881 620 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 ADIGQ0VDE8 80 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 LAPTM4AQ15012 233 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 STXBP2Q15833 593 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 UGT3A2Q3SY77 523 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms