RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 GMPR2Q9P2T1 348 aaKnown RBP21.95■■□□□ 1.1
UPF3A-201ENST00000351487 ANKRD12Q6UB98 2062 aa21.94■■□□□ 1.1
UPF3A-201ENST00000351487 ZNF839A8K0R7 811 aa21.94■■□□□ 1.1
UPF3A-201ENST00000351487 STX7O15400 261 aaKnown RBP21.94■■□□□ 1.1
UPF3A-201ENST00000351487 BMP2P12643 396 aa21.94■■□□□ 1.1
UPF3A-201ENST00000351487 PSMC3P17980 439 aa21.94■■□□□ 1.1
UPF3A-201ENST00000351487 HOXD10P28358 340 aa21.94■■□□□ 1.1
UPF3A-201ENST00000351487 PRDX3P30048 256 aaKnown RBP21.94■■□□□ 1.1
UPF3A-201ENST00000351487 OR1D2P34982 312 aa21.94■■□□□ 1.1
UPF3A-201ENST00000351487 AGTR2P50052 363 aa21.94■■□□□ 1.1
UPF3A-201ENST00000351487 IL2P60568 153 aa21.94■■□□□ 1.1
UPF3A-201ENST00000351487 ECT2LQ008S8 904 aa21.94■■□□□ 1.1
UPF3A-201ENST00000351487 NRF1Q16656 503 aa21.94■■□□□ 1.1
UPF3A-201ENST00000351487 FBXO48Q5FWF7 155 aa21.94■■□□□ 1.1
UPF3A-201ENST00000351487 NCEH1Q6PIU2 408 aa21.94■■□□□ 1.1
UPF3A-201ENST00000351487 ERMP1Q7Z2K6 904 aa21.94■■□□□ 1.1
UPF3A-201ENST00000351487 LRRC43Q8N309 656 aa21.94■■□□□ 1.1
UPF3A-201ENST00000351487 PXYLP1Q8TE99 480 aa21.94■■□□□ 1.1
UPF3A-201ENST00000351487 CANT1Q8WVQ1 401 aa21.94■■□□□ 1.1
UPF3A-201ENST00000351487 TRIM54Q9BYV2 358 aa21.94■■□□□ 1.1
UPF3A-201ENST00000351487 BRINP2Q9C0B6 783 aa21.94■■□□□ 1.1
UPF3A-201ENST00000351487 MUC3BQ9H195 1237 aa21.94■■□□□ 1.1
UPF3A-201ENST00000351487 APPL1Q9UKG1 709 aa21.94■■□□□ 1.1
UPF3A-201ENST00000351487 TIMM22Q9Y584 194 aa21.94■■□□□ 1.1
UPF3A-201ENST00000351487 A0A1W2PP18 115 aa21.94■■□□□ 1.1
UPF3A-201ENST00000351487 CHEK2O96017 543 aa21.94■■□□□ 1.1
UPF3A-201ENST00000351487 HK3P52790 923 aa21.94■■□□□ 1.1
UPF3A-201ENST00000351487 DIO3P55073 304 aa21.94■■□□□ 1.1
UPF3A-201ENST00000351487 EFHBQ8N7U6 833 aa21.94■■□□□ 1.1
UPF3A-201ENST00000351487 OR56A4Q8NGH8 313 aa21.94■■□□□ 1.1
UPF3A-201ENST00000351487 LINGO1Q96FE5 620 aa21.94■■□□□ 1.1
UPF3A-201ENST00000351487 IL1RL2Q9HB29 575 aa21.94■■□□□ 1.1
UPF3A-201ENST00000351487 PFDN4Q9NQP4 134 aa21.94■■□□□ 1.1
UPF3A-201ENST00000351487 CMTM6Q9NX76 183 aa21.94■■□□□ 1.1
UPF3A-201ENST00000351487 TRPM5Q9NZQ8 1165 aa21.94■■□□□ 1.1
UPF3A-201ENST00000351487 ESR1P03372 595 aa21.93■■□□□ 1.1
UPF3A-201ENST00000351487 RPL17P18621 184 aaKnown RBP21.93■■□□□ 1.1
UPF3A-201ENST00000351487 PTGER3P43115 390 aa21.93■■□□□ 1.1
UPF3A-201ENST00000351487 FAM126BQ8IXS8 530 aa21.93■■□□□ 1.1
UPF3A-201ENST00000351487 CCT7Q99832 543 aa21.93■■□□□ 1.1
UPF3A-201ENST00000351487 SH3GL3Q99963 347 aa21.93■■□□□ 1.1
UPF3A-201ENST00000351487 HGH1Q9BTY7 390 aa21.93■■□□□ 1.1
UPF3A-201ENST00000351487 KLF16Q9BXK1 252 aaPredicted RBP21.93■■□□□ 1.1
UPF3A-201ENST00000351487 ACTR3BQ9P1U1 418 aa21.93■■□□□ 1.1
UPF3A-201ENST00000351487 LHX3Q9UBR4 397 aa21.93■■□□□ 1.1
UPF3A-201ENST00000351487 AFF4Q9UHB7 1163 aaKnown RBP21.93■■□□□ 1.1
UPF3A-201ENST00000351487 PCDHA9Q9Y5H5 950 aa21.93■■□□□ 1.1
UPF3A-201ENST00000351487 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.92■■□□□ 1.1
UPF3A-201ENST00000351487 NCF1BA6NI72 391 aaPredicted RBP21.92■■□□□ 1.1
UPF3A-201ENST00000351487 NCF1CA8MVU1 366 aaPredicted RBP21.92■■□□□ 1.1
UPF3A-201ENST00000351487 C9JVG2 144 aa21.92■■□□□ 1.1
UPF3A-201ENST00000351487 E2F3O00716 465 aa21.92■■□□□ 1.1
UPF3A-201ENST00000351487 C1RP00736 705 aa21.92■■□□□ 1.1
UPF3A-201ENST00000351487 NCF1P14598 390 aaPredicted RBP21.92■■□□□ 1.1
UPF3A-201ENST00000351487 ZFP36L2P47974 494 aaKnown RBP21.92■■□□□ 1.1
UPF3A-201ENST00000351487 SH3BGRP55822 239 aaPredicted RBP21.92■■□□□ 1.1
UPF3A-201ENST00000351487 ZRANB3Q5FWF4 1079 aa21.92■■□□□ 1.1
UPF3A-201ENST00000351487 UGT3A1Q6NUS8 523 aa21.92■■□□□ 1.1
UPF3A-201ENST00000351487 C16orf59Q7L2K0 433 aa21.92■■□□□ 1.1
UPF3A-201ENST00000351487 AMIGO2Q86SJ2 522 aa21.92■■□□□ 1.1
UPF3A-201ENST00000351487 CARM1Q86X55 608 aa21.92■■□□□ 1.1
UPF3A-201ENST00000351487 GPSM1Q86YR5 675 aa21.92■■□□□ 1.1
UPF3A-201ENST00000351487 RNF168Q8IYW5 571 aaPredicted RBP21.92■■□□□ 1.1
UPF3A-201ENST00000351487 EEF1AKMT1Q8WVE0 214 aa21.92■■□□□ 1.1
UPF3A-201ENST00000351487 ZNF382Q96SR6 550 aa21.92■■□□□ 1.1
UPF3A-201ENST00000351487 MUC13Q9H3R2 512 aa21.92■■□□□ 1.1
UPF3A-201ENST00000351487 NOL11Q9H8H0 719 aaKnown RBP21.92■■□□□ 1.1
UPF3A-201ENST00000351487 TMEM45AQ9NWC5 275 aa21.92■■□□□ 1.1
UPF3A-201ENST00000351487 HSFX1Q9UBD0 423 aa21.92■■□□□ 1.1
UPF3A-201ENST00000351487 STOML2Q9UJZ1 356 aa21.92■■□□□ 1.1
UPF3A-201ENST00000351487 AK5Q9Y6K8 562 aa21.92■■□□□ 1.1
UPF3A-201ENST00000351487 PLXNA4Q9HCM2 1894 aa21.92■■□□□ 1.1
UPF3A-201ENST00000351487 TIPRLO75663 272 aa21.92■■□□□ 1.1
UPF3A-201ENST00000351487 SEC24AO95486 1093 aa21.92■■□□□ 1.1
UPF3A-201ENST00000351487 CAPRIN1Q14444 709 aaKnown RBP21.92■■□□□ 1.1
UPF3A-201ENST00000351487 GPRIN3Q6ZVF9 776 aa21.92■■□□□ 1.1
UPF3A-201ENST00000351487 CPNE9Q8IYJ1 553 aa21.92■■□□□ 1.1
UPF3A-201ENST00000351487 STK40Q8N2I9 435 aa21.92■■□□□ 1.1
UPF3A-201ENST00000351487 RAET1EQ8TD07 263 aa21.92■■□□□ 1.1
UPF3A-201ENST00000351487 WBP2Q969T9 261 aa21.92■■□□□ 1.1
UPF3A-201ENST00000351487 DGCR14Q96DF8 476 aaKnown RBP21.92■■□□□ 1.1
UPF3A-201ENST00000351487 PRPF18Q99633 342 aaKnown RBP21.92■■□□□ 1.1
UPF3A-201ENST00000351487 SLC29A1Q99808 456 aa21.92■■□□□ 1.1
UPF3A-201ENST00000351487 CIB1Q99828 191 aa21.92■■□□□ 1.1
UPF3A-201ENST00000351487 RNF38Q9H0F5 515 aa21.92■■□□□ 1.1
UPF3A-201ENST00000351487 P2RY12Q9H244 342 aa21.92■■□□□ 1.1
UPF3A-201ENST00000351487 BPIFA1Q9NP55 256 aa21.92■■□□□ 1.1
UPF3A-201ENST00000351487 SCN5AQ14524 2016 aa21.91■■□□□ 1.1
UPF3A-201ENST00000351487 PITPNM1O00562 1244 aa21.91■■□□□ 1.1
UPF3A-201ENST00000351487 FZD6O60353 706 aa21.91■■□□□ 1.1
UPF3A-201ENST00000351487 TSPAN3O60637 253 aa21.91■■□□□ 1.1
UPF3A-201ENST00000351487 SNAP91O60641 907 aa21.91■■□□□ 1.1
UPF3A-201ENST00000351487 SNX2O60749 519 aa21.91■■□□□ 1.1
UPF3A-201ENST00000351487 CHRM3P20309 590 aa21.91■■□□□ 1.1
UPF3A-201ENST00000351487 KCNK10P57789 538 aa21.91■■□□□ 1.1
UPF3A-201ENST00000351487 PDCD4Q53EL6 469 aaKnown RBP21.91■■□□□ 1.1
UPF3A-201ENST00000351487 INO80DQ53TQ3 878 aaPredicted RBP21.91■■□□□ 1.1
UPF3A-201ENST00000351487 PPP4R4Q6NUP7 873 aa21.91■■□□□ 1.1
UPF3A-201ENST00000351487 IYDQ6PHW0 289 aa21.91■■□□□ 1.1
UPF3A-201ENST00000351487 METTL25Q8N6Q8 603 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms