RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 DCBLD1Q8N8Z6 715 aa21.83■■□□□ 1.09
SNX3-202ENST00000349379 ZNF398Q8TD17 642 aa21.83■■□□□ 1.09
SNX3-202ENST00000349379 ZDHHC1Q8WTX9 485 aa21.83■■□□□ 1.09
SNX3-202ENST00000349379 PIH1D1Q9NWS0 290 aaKnown RBP21.83■■□□□ 1.09
SNX3-202ENST00000349379 RABGEF1Q9UJ41 708 aa21.83■■□□□ 1.09
SNX3-202ENST00000349379 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.83■■□□□ 1.094e-7■□□□□ 10.3
SNX3-202ENST00000349379 KIF26BQ2KJY2 2108 aa21.83■■□□□ 1.08
SNX3-202ENST00000349379 FAM149AA5PLN7 773 aa21.82■■□□□ 1.08
SNX3-202ENST00000349379 MROH6A6NGR9 719 aa21.82■■□□□ 1.08
SNX3-202ENST00000349379 PRR19A6NJB7 356 aa21.82■■□□□ 1.08
SNX3-202ENST00000349379 E7EVH7 732 aa21.82■■□□□ 1.08
SNX3-202ENST00000349379 ZNF185O15231 689 aa21.82■■□□□ 1.08
SNX3-202ENST00000349379 APRTP07741 180 aa21.82■■□□□ 1.08
SNX3-202ENST00000349379 GLB1P16278 677 aa21.82■■□□□ 1.08
SNX3-202ENST00000349379 TCP1P17987 556 aaKnown RBP21.82■■□□□ 1.08
SNX3-202ENST00000349379 GNG11P61952 73 aa21.82■■□□□ 1.08
SNX3-202ENST00000349379 TMEM115Q12893 351 aaPredicted RBP21.82■■□□□ 1.08
SNX3-202ENST00000349379 POU6F1Q14863 301 aa21.82■■□□□ 1.08
SNX3-202ENST00000349379 LDLRAP1Q5SW96 308 aa21.82■■□□□ 1.08
SNX3-202ENST00000349379 GPRC6AQ5T6X5 926 aa21.82■■□□□ 1.08
SNX3-202ENST00000349379 CHST15Q7LFX5 561 aaPredicted RBP21.82■■□□□ 1.08
SNX3-202ENST00000349379 GSTA5Q7RTV2 222 aa21.82■■□□□ 1.08
SNX3-202ENST00000349379 MARCH9Q86YJ5 346 aa21.82■■□□□ 1.08
SNX3-202ENST00000349379 MAPK15Q8TD08 544 aa21.82■■□□□ 1.08
SNX3-202ENST00000349379 MAGOHBQ96A72 148 aaKnown RBP21.82■■□□□ 1.08
SNX3-202ENST00000349379 CCDC74AQ96AQ1 378 aa21.82■■□□□ 1.08
SNX3-202ENST00000349379 DNAJC1Q96KC8 554 aaKnown RBP21.82■■□□□ 1.08
SNX3-202ENST00000349379 CCDC3Q9BQI4 270 aa21.82■■□□□ 1.08
SNX3-202ENST00000349379 AP1M1Q9BXS5 423 aa21.82■■□□□ 1.08
SNX3-202ENST00000349379 NLE1Q9NVX2 485 aaPredicted RBP21.82■■□□□ 1.08
SNX3-202ENST00000349379 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP21.81■■□□□ 1.08
SNX3-202ENST00000349379 A6NCN8 305 aa21.81■■□□□ 1.08
SNX3-202ENST00000349379 NUDT21O43809 227 aaKnown RBP21.81■■□□□ 1.08
SNX3-202ENST00000349379 CDK14O94921 469 aa21.81■■□□□ 1.08
SNX3-202ENST00000349379 ACP5P13686 325 aa21.81■■□□□ 1.08
SNX3-202ENST00000349379 PNLIPP16233 465 aa21.81■■□□□ 1.08
SNX3-202ENST00000349379 NFATC2Q13469 925 aa21.81■■□□□ 1.08
SNX3-202ENST00000349379 PAPD7Q5XG87 772 aaKnown RBP21.81■■□□□ 1.08
SNX3-202ENST00000349379 C11orf96Q7Z7L8 435 aa21.81■■□□□ 1.08
SNX3-202ENST00000349379 LRRTM4Q86VH4 590 aa21.81■■□□□ 1.08
SNX3-202ENST00000349379 STYXQ8WUJ0 223 aa21.81■■□□□ 1.08
SNX3-202ENST00000349379 PATE1Q8WXA2 126 aa21.81■■□□□ 1.08
SNX3-202ENST00000349379 RANBP9Q96S59 729 aa21.81■■□□□ 1.08
SNX3-202ENST00000349379 ASB8Q9H765 288 aa21.81■■□□□ 1.08
SNX3-202ENST00000349379 CLCA2Q9UQC9 943 aa21.81■■□□□ 1.08
SNX3-202ENST00000349379 NEU2Q9Y3R4 380 aa21.81■■□□□ 1.08
SNX3-202ENST00000349379 NTN3O00634 580 aaPredicted RBP21.8■■□□□ 1.08
SNX3-202ENST00000349379 KMOO15229 486 aa21.8■■□□□ 1.08
SNX3-202ENST00000349379 ECEL1O95672 775 aa21.8■■□□□ 1.08
SNX3-202ENST00000349379 MT-CO3P00414 261 aa21.8■■□□□ 1.08
SNX3-202ENST00000349379 JUPP14923 745 aa21.8■■□□□ 1.08
SNX3-202ENST00000349379 COILP38432 576 aaPredicted RBP21.8■■□□□ 1.08
SNX3-202ENST00000349379 LMAN1P49257 510 aa21.8■■□□□ 1.08
SNX3-202ENST00000349379 MAZP56270 477 aaKnown RBP21.8■■□□□ 1.08
SNX3-202ENST00000349379 NR1D2Q14995 579 aa21.8■■□□□ 1.08
SNX3-202ENST00000349379 UNQ6494/PRO21346Q6UXR6 183 aa21.8■■□□□ 1.08
SNX3-202ENST00000349379 PPP1R21Q6ZMI0 780 aa21.8■■□□□ 1.08
SNX3-202ENST00000349379 ZNF438Q7Z4V0 828 aa21.8■■□□□ 1.08
SNX3-202ENST00000349379 ARL14Q8N4G2 192 aa21.8■■□□□ 1.08
SNX3-202ENST00000349379 DNAAF3Q8N9W5 541 aa21.8■■□□□ 1.08
SNX3-202ENST00000349379 WDR48Q8TAF3 677 aa21.8■■□□□ 1.08
SNX3-202ENST00000349379 CNTNAP3BQ96NU0 1288 aa21.8■■□□□ 1.08
SNX3-202ENST00000349379 TIMM29Q9BSF4 260 aa21.8■■□□□ 1.08
SNX3-202ENST00000349379 CNTNAP3Q9BZ76 1288 aa21.8■■□□□ 1.08
SNX3-202ENST00000349379 ZCCHC2Q9C0B9 1178 aaKnown RBP21.8■■□□□ 1.08
SNX3-202ENST00000349379 SLC23A2Q9UGH3 650 aa21.8■■□□□ 1.08
SNX3-202ENST00000349379 RIMKLBQ9ULI2 386 aa21.8■■□□□ 1.08
SNX3-202ENST00000349379 KCNK6Q9Y257 313 aa21.8■■□□□ 1.08
SNX3-202ENST00000349379 RNF215Q9Y6U7 377 aa21.8■■□□□ 1.08
SNX3-202ENST00000349379 MAP1BP46821 2468 aaKnown RBP21.8■■□□□ 1.08
SNX3-202ENST00000349379 TRBV5-4A0A0C4DH59 114 aa21.79■■□□□ 1.08
SNX3-202ENST00000349379 C1QTNF9BB2RNN3 333 aa21.79■■□□□ 1.08
SNX3-202ENST00000349379 CCL22O00626 93 aa21.79■■□□□ 1.08
SNX3-202ENST00000349379 CASC3O15234 703 aaKnown RBP21.79■■□□□ 1.08
SNX3-202ENST00000349379 FANCGO15287 622 aa21.79■■□□□ 1.08
SNX3-202ENST00000349379 PHF2O75151 1096 aa21.79■■□□□ 1.08
SNX3-202ENST00000349379 EML2O95834 649 aa21.79■■□□□ 1.08
SNX3-202ENST00000349379 C1QTNF9P0C862 333 aa21.79■■□□□ 1.08
SNX3-202ENST00000349379 MAGEA6P43360 314 aa21.79■■□□□ 1.08
SNX3-202ENST00000349379 BASP1P80723 227 aaKnown RBP21.79■■□□□ 1.08
SNX3-202ENST00000349379 TMPRSS15P98073 1019 aa21.79■■□□□ 1.08
SNX3-202ENST00000349379 TARDBPQ13148 414 aaKnown RBP eCLIP21.79■■□□□ 1.08
SNX3-202ENST00000349379 SEPT6Q14141 434 aa21.79■■□□□ 1.08
SNX3-202ENST00000349379 CCDC137Q6PK04 289 aaKnown RBP21.79■■□□□ 1.08
SNX3-202ENST00000349379 CRTC3Q6UUV7 619 aa21.79■■□□□ 1.08
SNX3-202ENST00000349379 SNX20Q7Z614 316 aa21.79■■□□□ 1.08
SNX3-202ENST00000349379 RASGEF1AQ8N9B8 481 aa21.79■■□□□ 1.08
SNX3-202ENST00000349379 GDAP1Q8TB36 358 aa21.79■■□□□ 1.08
SNX3-202ENST00000349379 CDKN2AIPNLQ96HQ2 116 aa21.79■■□□□ 1.08
SNX3-202ENST00000349379 LRIT1Q9P2V4 623 aa21.79■■□□□ 1.08
SNX3-202ENST00000349379 TBC1D29Q9UFV1 150 aa21.79■■□□□ 1.08
SNX3-202ENST00000349379 TCEA3O75764 348 aa21.78■■□□□ 1.08
SNX3-202ENST00000349379 CAPNS1P04632 268 aa21.78■■□□□ 1.08
SNX3-202ENST00000349379 ZNF7P17097 686 aaPredicted RBP21.78■■□□□ 1.08
SNX3-202ENST00000349379 TPSB2P20231 275 aa21.78■■□□□ 1.08
SNX3-202ENST00000349379 ITGALP20701 1170 aa21.78■■□□□ 1.08
SNX3-202ENST00000349379 MC4RP32245 332 aa21.78■■□□□ 1.08
SNX3-202ENST00000349379 FASLGP48023 281 aa21.78■■□□□ 1.08
SNX3-202ENST00000349379 FNTAP49354 379 aa21.78■■□□□ 1.08
SNX3-202ENST00000349379 CTSCP53634 463 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms