RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 CHD7Q9P2D1 2997 aa20.18■□□□□ 0.82
CHRNA3-202ENST00000348639 ATP6AP2A0A1C7CYW4 349 aa20.17■□□□□ 0.82
CHRNA3-202ENST00000348639 IQCF5A8MTL0 148 aa20.17■□□□□ 0.82
CHRNA3-202ENST00000348639 ATP6AP2O75787 350 aa20.17■□□□□ 0.82
CHRNA3-202ENST00000348639 CLDN7O95471 211 aa20.17■□□□□ 0.82
CHRNA3-202ENST00000348639 RPS3P23396 243 aaKnown RBP eCLIP20.17■□□□□ 0.82
CHRNA3-202ENST00000348639 HLA-FP30511 346 aa20.17■□□□□ 0.82
CHRNA3-202ENST00000348639 CTSOP43234 321 aaPredicted RBP20.17■□□□□ 0.82
CHRNA3-202ENST00000348639 SNRPD1P62314 119 aaKnown RBP20.17■□□□□ 0.82
CHRNA3-202ENST00000348639 PIGGQ5H8A4 983 aa20.17■□□□□ 0.82
CHRNA3-202ENST00000348639 FAM219BQ5XKK7 198 aa20.17■□□□□ 0.82
CHRNA3-202ENST00000348639 SLC26A7Q8TE54 656 aa20.17■□□□□ 0.82
CHRNA3-202ENST00000348639 MRPL1Q9BYD6 325 aaKnown RBP20.17■□□□□ 0.82
CHRNA3-202ENST00000348639 SARS2Q9NP81 518 aaKnown RBP20.17■□□□□ 0.82
CHRNA3-202ENST00000348639 IL26Q9NPH9 171 aa20.17■□□□□ 0.82
CHRNA3-202ENST00000348639 LZTS1Q9Y250 596 aa20.17■□□□□ 0.82
CHRNA3-202ENST00000348639 SLC4A7Q9Y6M7 1214 aa20.17■□□□□ 0.82
CHRNA3-202ENST00000348639 PDE4DIPQ5VU43 2346 aa20.17■□□□□ 0.82
CHRNA3-202ENST00000348639 FGF19O95750 216 aa20.17■□□□□ 0.82
CHRNA3-202ENST00000348639 ENO3P13929 434 aaPredicted RBP20.17■□□□□ 0.82
CHRNA3-202ENST00000348639 ITGALP20701 1170 aa20.17■□□□□ 0.82
CHRNA3-202ENST00000348639 DDX6P26196 483 aaKnown RBP eCLIP20.17■□□□□ 0.82
CHRNA3-202ENST00000348639 EPHA5P54756 1037 aa20.17■□□□□ 0.82
CHRNA3-202ENST00000348639 FOXA1P55317 472 aa20.17■□□□□ 0.82
CHRNA3-202ENST00000348639 NFATC2Q13469 925 aa20.17■□□□□ 0.82
CHRNA3-202ENST00000348639 TEAD2Q15562 447 aa20.17■□□□□ 0.82
CHRNA3-202ENST00000348639 AGKQ53H12 422 aa20.17■□□□□ 0.82
CHRNA3-202ENST00000348639 ZNF483Q8TF39 744 aaPredicted RBP20.17■□□□□ 0.82
CHRNA3-202ENST00000348639 PYDC1Q8WXC3 89 aa20.17■□□□□ 0.82
CHRNA3-202ENST00000348639 LYSMD1Q96S90 227 aa20.17■□□□□ 0.82
CHRNA3-202ENST00000348639 NPAS2Q99743 824 aa20.17■□□□□ 0.82
CHRNA3-202ENST00000348639 CLPBQ9H078 707 aa20.17■□□□□ 0.82
CHRNA3-202ENST00000348639 ASB8Q9H765 288 aa20.17■□□□□ 0.82
CHRNA3-202ENST00000348639 AKTIPQ9H8T0 292 aa20.17■□□□□ 0.82
CHRNA3-202ENST00000348639 TLR9Q9NR96 1032 aa20.17■□□□□ 0.82
CHRNA3-202ENST00000348639 TRBV5-4A0A0C4DH59 114 aa20.16■□□□□ 0.82
CHRNA3-202ENST00000348639 PIP5K1BO14986 540 aa20.16■□□□□ 0.82
CHRNA3-202ENST00000348639 BNIP3LO60238 219 aa20.16■□□□□ 0.82
CHRNA3-202ENST00000348639 BAG2O95816 211 aa20.16■□□□□ 0.82
CHRNA3-202ENST00000348639 STK19P49842 368 aaPredicted RBP20.16■□□□□ 0.82
CHRNA3-202ENST00000348639 HK3P52790 923 aa20.16■□□□□ 0.82
CHRNA3-202ENST00000348639 ZNF423Q2M1K9 1284 aa20.16■□□□□ 0.82
CHRNA3-202ENST00000348639 EML3Q32P44 896 aa20.16■□□□□ 0.82
CHRNA3-202ENST00000348639 ZSWIM9Q86XI8 627 aa20.16■□□□□ 0.82
CHRNA3-202ENST00000348639 RBFAQ8N0V3 343 aa20.16■□□□□ 0.82
CHRNA3-202ENST00000348639 CBARPQ8N350 705 aaPredicted RBP20.16■□□□□ 0.82
CHRNA3-202ENST00000348639 VOPP1Q96AW1 172 aa20.16■□□□□ 0.82
CHRNA3-202ENST00000348639 TUBGCP5Q96RT8 1024 aa20.16■□□□□ 0.82
CHRNA3-202ENST00000348639 SEMA4BQ9NPR2 832 aaPredicted RBP20.16■□□□□ 0.82
CHRNA3-202ENST00000348639 NCF1BA6NI72 391 aaPredicted RBP20.15■□□□□ 0.82
CHRNA3-202ENST00000348639 NCF1CA8MVU1 366 aaPredicted RBP20.15■□□□□ 0.82
CHRNA3-202ENST00000348639 MAP3K7O43318 606 aa20.15■□□□□ 0.82
CHRNA3-202ENST00000348639 SNX2O60749 519 aa20.15■□□□□ 0.82
CHRNA3-202ENST00000348639 MLYCDO95822 493 aa20.15■□□□□ 0.82
CHRNA3-202ENST00000348639 NCF1P14598 390 aaPredicted RBP20.15■□□□□ 0.82
CHRNA3-202ENST00000348639 BPIP17213 487 aa20.15■□□□□ 0.82
CHRNA3-202ENST00000348639 ACADVLP49748 655 aa20.15■□□□□ 0.82
CHRNA3-202ENST00000348639 AGTR2P50052 363 aa20.15■□□□□ 0.82
CHRNA3-202ENST00000348639 THOP1P52888 689 aa20.15■□□□□ 0.82
CHRNA3-202ENST00000348639 MYLK3Q32MK0 819 aa20.15■□□□□ 0.82
CHRNA3-202ENST00000348639 FUT11Q495W5 492 aa20.15■□□□□ 0.82
CHRNA3-202ENST00000348639 LYPLAL1Q5VWZ2 237 aa20.15■□□□□ 0.82
CHRNA3-202ENST00000348639 PTRHD1Q6GMV3 140 aaKnown RBP20.15■□□□□ 0.82
CHRNA3-202ENST00000348639 SPRED2Q7Z698 418 aa20.15■□□□□ 0.82
CHRNA3-202ENST00000348639 KBTBD6Q86V97 674 aa20.15■□□□□ 0.82
CHRNA3-202ENST00000348639 TMEM25Q86YD3 366 aa20.15■□□□□ 0.82
CHRNA3-202ENST00000348639 RIN3Q8TB24 985 aa20.15■□□□□ 0.82
CHRNA3-202ENST00000348639 KCNA7Q96RP8 456 aa20.15■□□□□ 0.82
CHRNA3-202ENST00000348639 FBRSL1Q9HCM7 1045 aaKnown RBP20.15■□□□□ 0.82
CHRNA3-202ENST00000348639 CCDC167Q9P0B6 97 aa20.15■□□□□ 0.82
CHRNA3-202ENST00000348639 PCTPQ9UKL6 214 aa20.15■□□□□ 0.82
CHRNA3-202ENST00000348639 CFLARO15519 480 aa20.15■□□□□ 0.82
CHRNA3-202ENST00000348639 SNRPB2P08579 225 aaKnown RBP20.15■□□□□ 0.82
CHRNA3-202ENST00000348639 ALDOCP09972 364 aaKnown RBP20.15■□□□□ 0.82
CHRNA3-202ENST00000348639 DPP6P42658 865 aa20.15■□□□□ 0.82
CHRNA3-202ENST00000348639 FBXO48Q5FWF7 155 aa20.15■□□□□ 0.82
CHRNA3-202ENST00000348639 GRAMD4Q6IC98 578 aa20.15■□□□□ 0.82
CHRNA3-202ENST00000348639 C22orf39Q6P5X5 142 aa20.15■□□□□ 0.82
CHRNA3-202ENST00000348639 RTL10Q7L3V2 364 aa20.15■□□□□ 0.82
CHRNA3-202ENST00000348639 SPPL3Q8TCT6 385 aa20.15■□□□□ 0.82
CHRNA3-202ENST00000348639 SP7Q8TDD2 431 aaPredicted RBP20.15■□□□□ 0.82
CHRNA3-202ENST00000348639 N4BP2L2Q92802 583 aaPredicted RBP20.15■□□□□ 0.82
CHRNA3-202ENST00000348639 C17orf80Q9BSJ5 609 aa20.15■□□□□ 0.82
CHRNA3-202ENST00000348639 TUBB1Q9H4B7 451 aa20.15■□□□□ 0.82
CHRNA3-202ENST00000348639 CD274Q9NZQ7 290 aa20.15■□□□□ 0.82
CHRNA3-202ENST00000348639 GNPTGQ9UJJ9 305 aa20.15■□□□□ 0.82
CHRNA3-202ENST00000348639 MYO7AQ13402 2215 aa20.15■□□□□ 0.82
CHRNA3-202ENST00000348639 HELZP42694 1942 aaKnown RBP20.14■□□□□ 0.82
CHRNA3-202ENST00000348639 GLYATL1P3A0A0U1RQE8 302 aa20.14■□□□□ 0.81
CHRNA3-202ENST00000348639 A0A1B0GTL3 188 aa20.14■□□□□ 0.81
CHRNA3-202ENST00000348639 NEDD8-MDP1E9PL57 170 aa20.14■□□□□ 0.81
CHRNA3-202ENST00000348639 GRM6O15303 877 aa20.14■□□□□ 0.81
CHRNA3-202ENST00000348639 MOSPD3O75425 235 aa20.14■□□□□ 0.81
CHRNA3-202ENST00000348639 RHOP08100 348 aa20.14■□□□□ 0.81
CHRNA3-202ENST00000348639 PTPN2P17706 415 aa20.14■□□□□ 0.81
CHRNA3-202ENST00000348639 ACRV1P26436 265 aa20.14■□□□□ 0.81
CHRNA3-202ENST00000348639 CA5AP35218 305 aa20.14■□□□□ 0.81
CHRNA3-202ENST00000348639 SPAM1P38567 509 aa20.14■□□□□ 0.81
CHRNA3-202ENST00000348639 STX1BP61266 288 aa20.14■□□□□ 0.81
CHRNA3-202ENST00000348639 TGFBIQ15582 683 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms