RNA–Protein interactions for RNA: ENST00000347691.9

TRAPPC6B-202, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6B, Length 3,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-202ENST00000347691 NCK1P16333 377 aa10.04□□□□□ -0.8
TRAPPC6B-202ENST00000347691 RHOQP17081 205 aa10.04□□□□□ -0.8
TRAPPC6B-202ENST00000347691 SERPINB10P48595 397 aa10.04□□□□□ -0.8
TRAPPC6B-202ENST00000347691 TMED10P49755 219 aaKnown RBP10.04□□□□□ -0.8
TRAPPC6B-202ENST00000347691 YWHAHQ04917 246 aaPredicted RBP10.04□□□□□ -0.8
TRAPPC6B-202ENST00000347691 ITGADQ13349 1161 aa10.04□□□□□ -0.8
TRAPPC6B-202ENST00000347691 OR4D1Q15615 310 aa10.04□□□□□ -0.8
TRAPPC6B-202ENST00000347691 FUT11Q495W5 492 aa10.04□□□□□ -0.8
TRAPPC6B-202ENST00000347691 CCDC92Q53HC0 331 aaPredicted RBP10.04□□□□□ -0.8
TRAPPC6B-202ENST00000347691 XKR7Q5GH72 579 aa10.04□□□□□ -0.8
TRAPPC6B-202ENST00000347691 ARMCX6Q7L4S7 300 aa10.04□□□□□ -0.8
TRAPPC6B-202ENST00000347691 PIM3Q86V86 326 aa10.04□□□□□ -0.8
TRAPPC6B-202ENST00000347691 TANKQ92844 425 aa10.04□□□□□ -0.8
TRAPPC6B-202ENST00000347691 ABHD8Q96I13 439 aa10.04□□□□□ -0.8
TRAPPC6B-202ENST00000347691 PDGFDQ9GZP0 370 aaPredicted RBP10.04□□□□□ -0.8
TRAPPC6B-202ENST00000347691 USE1Q9NZ43 259 aa10.04□□□□□ -0.8
TRAPPC6B-202ENST00000347691 WARS2Q9UGM6 360 aaKnown RBP10.04□□□□□ -0.8
TRAPPC6B-202ENST00000347691 ARNTLO00327 626 aa10.04□□□□□ -0.8
TRAPPC6B-202ENST00000347691 SYNCRIPO60506 623 aaKnown RBP10.04□□□□□ -0.8
TRAPPC6B-202ENST00000347691 FOXD2O60548 495 aaPredicted RBP10.04□□□□□ -0.8
TRAPPC6B-202ENST00000347691 SNAI1O95863 264 aaPredicted RBP10.04□□□□□ -0.8
TRAPPC6B-202ENST00000347691 C1RP00736 705 aa10.04□□□□□ -0.8
TRAPPC6B-202ENST00000347691 CHRM3P20309 590 aa10.04□□□□□ -0.8
TRAPPC6B-202ENST00000347691 RABGGTBP53611 331 aa10.04□□□□□ -0.8
TRAPPC6B-202ENST00000347691 DIO3P55073 304 aa10.04□□□□□ -0.8
TRAPPC6B-202ENST00000347691 FOXA1P55317 472 aa10.04□□□□□ -0.8
TRAPPC6B-202ENST00000347691 OXCT1P55809 520 aa10.04□□□□□ -0.8
TRAPPC6B-202ENST00000347691 TRIM32Q13049 653 aa10.04□□□□□ -0.8
TRAPPC6B-202ENST00000347691 IL18R1Q13478 541 aa10.04□□□□□ -0.8
TRAPPC6B-202ENST00000347691 RFX4Q33E94 735 aa10.04□□□□□ -0.8
TRAPPC6B-202ENST00000347691 SIRPB2Q5JXA9 342 aa10.04□□□□□ -0.8
TRAPPC6B-202ENST00000347691 OTUD3Q5T2D3 398 aaPredicted RBP10.04□□□□□ -0.8
TRAPPC6B-202ENST00000347691 FAM171BQ6P995 826 aa10.04□□□□□ -0.8
TRAPPC6B-202ENST00000347691 ZFAND4Q86XD8 727 aa10.04□□□□□ -0.8
TRAPPC6B-202ENST00000347691 GALNT13Q8IUC8 556 aa10.04□□□□□ -0.8
TRAPPC6B-202ENST00000347691 KIAA2013Q8IYS2 634 aa10.04□□□□□ -0.8
TRAPPC6B-202ENST00000347691 PARP8Q8N3A8 854 aa10.04□□□□□ -0.8
TRAPPC6B-202ENST00000347691 TMBIM1Q969X1 311 aa10.04□□□□□ -0.8
TRAPPC6B-202ENST00000347691 PABPC5Q96DU9 382 aaKnown RBP10.04□□□□□ -0.8
TRAPPC6B-202ENST00000347691 CCDC115Q96NT0 180 aa10.04□□□□□ -0.8
TRAPPC6B-202ENST00000347691 RBM4BQ9BQ04 359 aaKnown RBP10.04□□□□□ -0.8
TRAPPC6B-202ENST00000347691 NEURL2Q9BR09 285 aa10.04□□□□□ -0.8
TRAPPC6B-202ENST00000347691 RBM4Q9BWF3 364 aaKnown RBP10.04□□□□□ -0.8
TRAPPC6B-202ENST00000347691 LHPPQ9H008 270 aa10.04□□□□□ -0.8
TRAPPC6B-202ENST00000347691 TMEM30AQ9NV96 361 aa10.04□□□□□ -0.8
TRAPPC6B-202ENST00000347691 DNAJB9Q9UBS3 223 aa10.04□□□□□ -0.8
TRAPPC6B-202ENST00000347691 PDE10AQ9Y233 779 aa10.04□□□□□ -0.8
TRAPPC6B-202ENST00000347691 LOC285095A0A1B0GVY8 99 aa10.03□□□□□ -0.8
TRAPPC6B-202ENST00000347691 H3BMM5 538 aa10.03□□□□□ -0.8
TRAPPC6B-202ENST00000347691 LDB2O43679 373 aa10.03□□□□□ -0.8
TRAPPC6B-202ENST00000347691 EPOP01588 193 aa10.03□□□□□ -0.8
TRAPPC6B-202ENST00000347691 ITIH1P19827 911 aa10.03□□□□□ -0.8
TRAPPC6B-202ENST00000347691 HRH2P25021 359 aa10.03□□□□□ -0.8
TRAPPC6B-202ENST00000347691 CASP2P42575 452 aa10.03□□□□□ -0.8
TRAPPC6B-202ENST00000347691 YAP1P46937 504 aaKnown RBP10.03□□□□□ -0.8
TRAPPC6B-202ENST00000347691 MLLT6P55198 1093 aaPredicted RBP10.03□□□□□ -0.8
TRAPPC6B-202ENST00000347691 ATP6AP1LQ52LC2 224 aa10.03□□□□□ -0.8
TRAPPC6B-202ENST00000347691 NOMO2Q5JPE7 1267 aa10.03□□□□□ -0.8
TRAPPC6B-202ENST00000347691 PAGE3Q5JUK9 113 aa10.03□□□□□ -0.8
TRAPPC6B-202ENST00000347691 GTF2IRD2BQ6EKJ0 949 aa10.03□□□□□ -0.8
TRAPPC6B-202ENST00000347691 XAF1Q6GPH4 301 aa10.03□□□□□ -0.8
TRAPPC6B-202ENST00000347691 GTF2IRD2Q86UP8 949 aa10.03□□□□□ -0.8
TRAPPC6B-202ENST00000347691 STK32CQ86UX6 486 aa10.03□□□□□ -0.8
TRAPPC6B-202ENST00000347691 TEX26Q8N6G2 289 aa10.03□□□□□ -0.8
TRAPPC6B-202ENST00000347691 PIK3C3Q8NEB9 887 aa10.03□□□□□ -0.8
TRAPPC6B-202ENST00000347691 BPIFB6Q8NFQ5 453 aa10.03□□□□□ -0.8
TRAPPC6B-202ENST00000347691 OR8J3Q8NGG0 315 aa10.03□□□□□ -0.8
TRAPPC6B-202ENST00000347691 VPS33AQ96AX1 596 aa10.03□□□□□ -0.8
TRAPPC6B-202ENST00000347691 MROQ9BYG7 248 aa10.03□□□□□ -0.8
TRAPPC6B-202ENST00000347691 TRNAU1APQ9NX07 287 aaKnown RBP10.03□□□□□ -0.8
TRAPPC6B-202ENST00000347691 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.03□□□□□ -0.8
TRAPPC6B-202ENST00000347691 MARCH4Q9P2E8 410 aaPredicted RBP10.03□□□□□ -0.8
TRAPPC6B-202ENST00000347691 GIMAP2Q9UG22 337 aa10.03□□□□□ -0.8
TRAPPC6B-202ENST00000347691 DAPK2Q9UIK4 370 aa10.03□□□□□ -0.8
TRAPPC6B-202ENST00000347691 TMED5Q9Y3A6 229 aa10.03□□□□□ -0.8
TRAPPC6B-202ENST00000347691 PTGDR2Q9Y5Y4 395 aa10.03□□□□□ -0.8
TRAPPC6B-202ENST00000347691 G3V2T6 193 aa10.03□□□□□ -0.8
TRAPPC6B-202ENST00000347691 CNOT3O75175 753 aaKnown RBP10.03□□□□□ -0.8
TRAPPC6B-202ENST00000347691 RHOBTB1O94844 696 aa10.03□□□□□ -0.8
TRAPPC6B-202ENST00000347691 GOT2P00505 430 aaKnown RBP10.03□□□□□ -0.8
TRAPPC6B-202ENST00000347691 BDNFP23560 247 aa10.03□□□□□ -0.8
TRAPPC6B-202ENST00000347691 ELK4P28324 431 aa10.03□□□□□ -0.8
TRAPPC6B-202ENST00000347691 HALP42357 657 aa10.03□□□□□ -0.8
TRAPPC6B-202ENST00000347691 ARSDP51689 593 aa10.03□□□□□ -0.8
TRAPPC6B-202ENST00000347691 STC1P52823 247 aa10.03□□□□□ -0.8
TRAPPC6B-202ENST00000347691 MFSD10Q14728 455 aa10.03□□□□□ -0.8
TRAPPC6B-202ENST00000347691 TYSND1Q2T9J0 566 aa10.03□□□□□ -0.8
TRAPPC6B-202ENST00000347691 EML3Q32P44 896 aa10.03□□□□□ -0.8
TRAPPC6B-202ENST00000347691 C6orf141Q5SZD1 244 aa10.03□□□□□ -0.8
TRAPPC6B-202ENST00000347691 MSANTD2Q6P1R3 559 aa10.03□□□□□ -0.8
TRAPPC6B-202ENST00000347691 CRTC3Q6UUV7 619 aa10.03□□□□□ -0.8
TRAPPC6B-202ENST00000347691 R3HCC1LQ7Z5L2 792 aaKnown RBP10.03□□□□□ -0.8
TRAPPC6B-202ENST00000347691 CTU1Q7Z7A3 348 aaKnown RBP10.03□□□□□ -0.8
TRAPPC6B-202ENST00000347691 DPP9Q86TI2 863 aa10.03□□□□□ -0.8
TRAPPC6B-202ENST00000347691 IGFN1Q86VF2 1251 aa10.03□□□□□ -0.8
TRAPPC6B-202ENST00000347691 ANKRD13BQ86YJ7 626 aa10.03□□□□□ -0.8
TRAPPC6B-202ENST00000347691 SPARTQ8N0X7 666 aa10.03□□□□□ -0.8
TRAPPC6B-202ENST00000347691 OR4L1Q8NH43 312 aa10.03□□□□□ -0.8
TRAPPC6B-202ENST00000347691 TMEM40Q8WWA1 233 aa10.03□□□□□ -0.8
TRAPPC6B-202ENST00000347691 TADA1Q96BN2 335 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms